BLASTX nr result

ID: Coptis24_contig00003872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003872
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283200.1| PREDICTED: uncharacterized protein LOC100260...   162   9e-38
ref|XP_004149935.1| PREDICTED: uncharacterized protein LOC101212...   161   1e-37
ref|XP_002319261.1| predicted protein [Populus trichocarpa] gi|2...   159   6e-37
gb|ABK92606.1| unknown [Populus trichocarpa]                          159   6e-37
gb|AFK41729.1| unknown [Lotus japonicus]                              157   2e-36

>ref|XP_002283200.1| PREDICTED: uncharacterized protein LOC100260725 [Vitis vinifera]
           gi|302143173|emb|CBI20468.3| unnamed protein product
           [Vitis vinifera]
          Length = 154

 Score =  162 bits (409), Expect = 9e-38
 Identities = 78/120 (65%), Positives = 91/120 (75%)
 Frame = +2

Query: 128 DSIHDXXXXXXXXXXXXXXEVKSFKLDTNGLLEVTLFGPCLTKFENRVYFDTVVKGNLSY 307
           D+IHD               V+S+ LD +G L+V L GPCLTKFE RVYFD+VV  NLSY
Sbjct: 20  DTIHDLLRSRGLPAGLLPKAVRSYTLDPDGRLQVFLDGPCLTKFETRVYFDSVVTANLSY 79

Query: 308 GELRGLEGLSQEELFLWLPIKDIIVDDPSSGLILFDVGVVHKQFSLSLFEDPPDCKPQSN 487
           G L G+ GL+QEELFLWLP+KDIIVDDP+SGLILFD+G+ HKQ SLSLFEDPPDCKPQ +
Sbjct: 80  GGLIGVVGLTQEELFLWLPVKDIIVDDPNSGLILFDIGLAHKQLSLSLFEDPPDCKPQGS 139


>ref|XP_004149935.1| PREDICTED: uncharacterized protein LOC101212020 [Cucumis sativus]
           gi|449497076|ref|XP_004160304.1| PREDICTED:
           uncharacterized protein LOC101230937 [Cucumis sativus]
          Length = 167

 Score =  161 bits (408), Expect = 1e-37
 Identities = 78/120 (65%), Positives = 90/120 (75%)
 Frame = +2

Query: 131 SIHDXXXXXXXXXXXXXXEVKSFKLDTNGLLEVTLFGPCLTKFENRVYFDTVVKGNLSYG 310
           +IHD              EVKS+ L  NGLL+V L GPCLTK+ENRV F++VV  NLSYG
Sbjct: 32  TIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLKVFLDGPCLTKYENRVIFESVVTANLSYG 91

Query: 311 ELRGLEGLSQEELFLWLPIKDIIVDDPSSGLILFDVGVVHKQFSLSLFEDPPDCKPQSNG 490
            L G++GL+QEELFLWLP+KDIIVDDP SGLILFD+GV HKQ +LSLFEDPP CK QS G
Sbjct: 92  SLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKSQSKG 151


>ref|XP_002319261.1| predicted protein [Populus trichocarpa] gi|222857637|gb|EEE95184.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  159 bits (402), Expect = 6e-37
 Identities = 77/117 (65%), Positives = 88/117 (75%)
 Frame = +2

Query: 131 SIHDXXXXXXXXXXXXXXEVKSFKLDTNGLLEVTLFGPCLTKFENRVYFDTVVKGNLSYG 310
           SIHD              EVKS+ L  +G LEV L GPCLTK+ENRV+F++VV+ NL+Y 
Sbjct: 31  SIHDLLISKGLPAGLLPKEVKSYTLSEDGYLEVFLDGPCLTKYENRVFFESVVRANLTYR 90

Query: 311 ELRGLEGLSQEELFLWLPIKDIIVDDPSSGLILFDVGVVHKQFSLSLFEDPPDCKPQ 481
            L G+ GLSQEELFLWLP+KDIIVDDP SGLILFD+GV HKQ SLSLFEDPP CKPQ
Sbjct: 91  SLSGVVGLSQEELFLWLPVKDIIVDDPGSGLILFDIGVAHKQLSLSLFEDPPSCKPQ 147


>gb|ABK92606.1| unknown [Populus trichocarpa]
          Length = 165

 Score =  159 bits (402), Expect = 6e-37
 Identities = 77/117 (65%), Positives = 88/117 (75%)
 Frame = +2

Query: 131 SIHDXXXXXXXXXXXXXXEVKSFKLDTNGLLEVTLFGPCLTKFENRVYFDTVVKGNLSYG 310
           SIHD              EVKS+ L  +G LEV L GPCLTK+ENRV+F++VV+ NL+Y 
Sbjct: 31  SIHDLLISKGLPAGLLPKEVKSYTLSEDGYLEVFLDGPCLTKYENRVFFESVVRANLTYR 90

Query: 311 ELRGLEGLSQEELFLWLPIKDIIVDDPSSGLILFDVGVVHKQFSLSLFEDPPDCKPQ 481
            L G+ GLSQEELFLWLP+KDIIVDDP SGLILFD+GV HKQ SLSLFEDPP CKPQ
Sbjct: 91  SLSGVVGLSQEELFLWLPVKDIIVDDPGSGLILFDIGVAHKQLSLSLFEDPPSCKPQ 147


>gb|AFK41729.1| unknown [Lotus japonicus]
          Length = 161

 Score =  157 bits (398), Expect = 2e-36
 Identities = 77/117 (65%), Positives = 86/117 (73%)
 Frame = +2

Query: 131 SIHDXXXXXXXXXXXXXXEVKSFKLDTNGLLEVTLFGPCLTKFENRVYFDTVVKGNLSYG 310
           SIHD              EVKSF    NG LEV L  PCLTK+ENRVYF+ VV  NL+YG
Sbjct: 27  SIHDLLKSKGLPAGLLPSEVKSFTFYENGRLEVFLNAPCLTKYENRVYFERVVTANLTYG 86

Query: 311 ELRGLEGLSQEELFLWLPIKDIIVDDPSSGLILFDVGVVHKQFSLSLFEDPPDCKPQ 481
            L G+EGL QEELF+WLP+KDIIVDDPSSGLILFD+G+ HKQ SLSLFEDPP CKP+
Sbjct: 87  SLIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAHKQLSLSLFEDPPHCKPE 143


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