BLASTX nr result

ID: Coptis24_contig00003863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003863
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285235.1| PREDICTED: uncharacterized protein LOC100260...    73   2e-11
ref|XP_002510114.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
ref|NP_001236830.1| uncharacterized protein LOC100305542 [Glycin...    62   6e-08
ref|NP_001242042.1| uncharacterized protein LOC100797484 [Glycin...    61   1e-07
ref|XP_004163242.1| PREDICTED: uncharacterized protein LOC101224...    57   2e-06

>ref|XP_002285235.1| PREDICTED: uncharacterized protein LOC100260909 [Vitis vinifera]
           gi|302142215|emb|CBI19418.3| unnamed protein product
           [Vitis vinifera]
          Length = 91

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/70 (55%), Positives = 44/70 (62%), Gaps = 10/70 (14%)
 Frame = +2

Query: 8   IRKNGLLKLSNDVRMCEYEDVHVMWEMLRKTEPDICRHIKAPKRHMTNS----------W 157
           IRK GLLKL NDVR CEY DVHVMWEML  TE ++ R   +P+R   NS          W
Sbjct: 24  IRKTGLLKLRNDVRTCEYRDVHVMWEMLNGTETELGR---SPERSTGNSKKRTYWKIIEW 80

Query: 158 ASRVPHLCRS 187
           A R P+LCRS
Sbjct: 81  AKRAPYLCRS 90


>ref|XP_002510114.1| conserved hypothetical protein [Ricinus communis]
           gi|223550815|gb|EEF52301.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
 Frame = +2

Query: 8   IRKNGLLKLSNDVRMCEYEDVHVMWEMLRKTEPDICRH---IKAPKRHMTN--SWASRVP 172
           IRK GLLKL +DVR CEYEDV +MWEMLR+TE +  R    +K+ KR      SWA   P
Sbjct: 24  IRKRGLLKLRHDVRACEYEDVRIMWEMLRRTETESARQSQPVKSKKRCFWKCFSWARCSP 83

Query: 173 HLCRS 187
           +  R+
Sbjct: 84  YFGRN 88


>ref|NP_001236830.1| uncharacterized protein LOC100305542 [Glycine max]
           gi|255625859|gb|ACU13274.1| unknown [Glycine max]
          Length = 100

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
 Frame = +2

Query: 2   LRIRKNGLLKLSNDVRMCEYEDVHVMWEMLRKTEPDICRHIKAPKRHMTNS-------WA 160
           L IRK GLLKLSNDVR CEYED+ VMWE+L + E +  R     K +           WA
Sbjct: 32  LGIRKTGLLKLSNDVRACEYEDIQVMWEILNRNESEFGRSSSTRKGNNKKGHCWKLLRWA 91

Query: 161 SRVPHLCRS 187
              P +CR+
Sbjct: 92  RCAPCMCRT 100


>ref|NP_001242042.1| uncharacterized protein LOC100797484 [Glycine max]
           gi|255640574|gb|ACU20572.1| unknown [Glycine max]
          Length = 104

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 11/73 (15%)
 Frame = +2

Query: 2   LRIRKNGLLKLSNDVRMCEYEDVHVMWEMLRKTEPDICRHIKAPKRHMTNS--------- 154
           L IRKNGLLKL +DVR CEYED+ VMWE+L + E        + K +  N+         
Sbjct: 32  LGIRKNGLLKLRHDVRACEYEDIRVMWEILNRNESKFGHSSSSRKGNNNNNNKKGHCWKL 91

Query: 155 --WASRVPHLCRS 187
             WA   P++CR+
Sbjct: 92  LRWARCAPYMCRA 104


>ref|XP_004163242.1| PREDICTED: uncharacterized protein LOC101224184 [Cucumis sativus]
          Length = 88

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +2

Query: 2   LRIRKNGLLKLSNDVRMCEYEDVHVMWEMLRKTEPD 109
           L  RK GL+KL  DV+ CEYEDVHVMWEML++ E D
Sbjct: 22  LGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETD 57


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