BLASTX nr result

ID: Coptis24_contig00003860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003860
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76854.1| hypothetical protein VITISV_006002 [Vitis vinifera]   171   3e-40
emb|CBI14777.3| unnamed protein product [Vitis vinifera]              155   2e-35
ref|XP_002316699.1| predicted protein [Populus trichocarpa] gi|2...   142   1e-31
ref|XP_002518589.1| conserved hypothetical protein [Ricinus comm...   134   4e-29
ref|XP_003593396.1| Pro-resilin [Medicago truncatula] gi|3554824...   118   4e-24

>emb|CAN76854.1| hypothetical protein VITISV_006002 [Vitis vinifera]
          Length = 359

 Score =  171 bits (434), Expect = 3e-40
 Identities = 111/302 (36%), Positives = 146/302 (48%), Gaps = 24/302 (7%)
 Frame = +1

Query: 190  YQNQVSSNSTILIYSSTMNFFKKKRNKSKVTVSYNMVTPSTITSEFNEPDFPEYDTTPYG 369
            Y     S S +++Y  T          ++ TVSYN        S FNEPDF EYD TPYG
Sbjct: 70   YSVSTVSQSELVVYDPTPYGGGYDPFHTQFTVSYNK-------SGFNEPDFEEYDPTPYG 122

Query: 370  GGYDISTTYGKPLPPNDIICYPRS-------SSVPNQNGQKPKVENESIPPSNDNSLTPH 528
            GGYDI+ TYGKPLPP+D ICYPR        S  P  +G+K + ++ES       S    
Sbjct: 123  GGYDIAQTYGKPLPPSDEICYPRDAPQAIAPSLDPLPSGKKEE-DHESASEPQIGSQPSK 181

Query: 529  EIHKEVDHVDHLPNPQNGFTPLFNDNDFSNEH--DLDIPIESNLRQELPD---------- 672
               +E +   H      G T    +  + N H  +L  P+ S+   E+            
Sbjct: 182  ASEEEQEQQSH------GGTEDVLNRGYENGHGSNLGEPLGSSQSGEIEGNYYDDYYPWT 235

Query: 673  -YGYDYTSQENGYSGYESLVPLPPSDY----IEPCGSIFGYWPCLLKDYQKNVKQNCYEH 837
             Y YDY +  +     E  VP  P  Y    ++ C SIFG+WPCL K  +   +    E 
Sbjct: 236  GYEYDYGNGRSDKHENEKQVPQDPWGYSPEAMDFCESIFGHWPCLYKQKRHGHQGTTNEE 295

Query: 838  GYGNEWKGTEEYFFGSSYPYNDSKDDSVGKVDFNYGYEKHHVEQPTYVQEENNEQLWSQK 1017
               N+WKGTE++ FGSSYPY   KD+     D  YGYE+H+ EQP Y Q EN E  W +K
Sbjct: 296  RNSNQWKGTEDFIFGSSYPYTHQKDEGGSHGDAIYGYERHYQEQPHYPQVENEENSWLKK 355

Query: 1018 LN 1023
             +
Sbjct: 356  FS 357


>emb|CBI14777.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  155 bits (393), Expect = 2e-35
 Identities = 104/286 (36%), Positives = 138/286 (48%), Gaps = 24/286 (8%)
 Frame = +1

Query: 190 YQNQVSSNSTILIYSSTMNFFKKKRNKSKVTVSYNMVTPSTITSEFNEPDFPEYDTTPYG 369
           Y     S S +++Y  T          ++ TVSYN        S FNEPDF EYD TPYG
Sbjct: 71  YSVSTVSQSELVVYDPTPYGGGYDPFHTQFTVSYNK-------SGFNEPDFEEYDPTPYG 123

Query: 370 GGYDISTTYGKPLPPNDIICYPRS-------SSVPNQNGQKPKVENESIPPSNDNSLTPH 528
           GGYDI+ TYGKPLPP+D ICYPR        S  P  +G+K + ++ES       S    
Sbjct: 124 GGYDIAQTYGKPLPPSDEICYPRDAPQAIAPSLDPLPSGKKEE-DHESASEPQKGSQPSK 182

Query: 529 EIHKEVDHVDHLPNPQNGFTPLFNDNDFSNEH--DLDIPIESNLRQEL-----------P 669
              +E +   H      G T    +  + N H  +L  P+ S+   E+            
Sbjct: 183 ASEEEQEQQSH------GGTEDVLNRGYENGHGSNLGEPLGSSQSGEIEGNYYDDYYPWT 236

Query: 670 DYGYDYTSQENGYSGYESLVPLPPSDY----IEPCGSIFGYWPCLLKDYQKNVKQNCYEH 837
            Y YDY +  +     E  VP  P  Y    ++ C SIFG+WPCL K  +   +    E 
Sbjct: 237 GYEYDYGNGRSDKHENEKQVPQDPWGYSPEAMDFCESIFGHWPCLYKQKRYGHQGTTNEE 296

Query: 838 GYGNEWKGTEEYFFGSSYPYNDSKDDSVGKVDFNYGYEKHHVEQPT 975
              N+WKGTE++ FGSSYPY  SKD+     D  YGYE+ + EQP+
Sbjct: 297 RNSNQWKGTEDFIFGSSYPYTPSKDEGGSHGDAIYGYERLYQEQPS 342


>ref|XP_002316699.1| predicted protein [Populus trichocarpa] gi|222859764|gb|EEE97311.1|
            predicted protein [Populus trichocarpa]
          Length = 354

 Score =  142 bits (359), Expect = 1e-31
 Identities = 96/273 (35%), Positives = 133/273 (48%), Gaps = 25/273 (9%)
 Frame = +1

Query: 268  KSKVTVSYNMVTPSTITSEFNEPDFPEYDTTPYGGGYDISTTYGKPLPPNDIICYPRSSS 447
            +++  VSYN+       SEFNEP + EYD TPY GGYD++ TYGKPLP +   CYPRS+ 
Sbjct: 96   QTRFIVSYNV-------SEFNEPAYEEYDPTPYDGGYDLAATYGKPLPHSAETCYPRSTP 148

Query: 448  VPNQNG-------------QKPKVENESIPPSNDNS-LTPHEIHKEVDHVD-HLPNPQNG 582
             PN +               K +V   +  P N++  ++P  I      V   L N +  
Sbjct: 149  DPNVSSLNGFSYGSIIAPYGKDEVNEPAAKPQNESKPISPPAIEAAPVPVPLELSNGRGN 208

Query: 583  FTPLFNDNDFSNEHDLDIPIESNLRQELPDYGYDYTSQENGYSGYESLVP---LPPS--- 744
                    + S E  +D P  S      P Y     +   G  GYE  +P   +PP    
Sbjct: 209  SQEKLQKGEESEEKGVDHPDPS------PGYDTGIANGSCGEFGYEYGMPGPQIPPGYGL 262

Query: 745  DYIEPCGSIFGYWPCLLKDYQKNVKQNCYE----HGYGNEWKGTEEYFFGSSYPYNDSKD 912
            + ++ C S+FGYWPCL + Y +NV  +C E       GN+WKGT +Y FGSS PY +  D
Sbjct: 263  EAMDLCESLFGYWPCLSR-YARNV-NDCQEAADCGSRGNQWKGTADYLFGSSNPYGERDD 320

Query: 913  DSVGKVDFNYGYEKHHVEQPTYVQEENNEQLWS 1011
                  +  YGYE+H+ E+P   Q +  E  WS
Sbjct: 321  GGNSHGNAIYGYERHYQEEPLSYQVKYVEDSWS 353


>ref|XP_002518589.1| conserved hypothetical protein [Ricinus communis]
            gi|223542434|gb|EEF43976.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 336

 Score =  134 bits (338), Expect = 4e-29
 Identities = 99/252 (39%), Positives = 131/252 (51%), Gaps = 21/252 (8%)
 Frame = +1

Query: 319  SEFNEPDFPEYDTTPYGGGYDISTTYGKPLPPNDIICYPRSSSVPNQNGQKPKVENESIP 498
            SEF++ +F E D TPYGGGYD S TYGKPLPP+D  CYPRS+S+   NG  P V      
Sbjct: 106  SEFDDTNFEECDPTPYGGGYDQSLTYGKPLPPSDETCYPRSTSL---NGVSPGV------ 156

Query: 499  PSNDNSLTPHEIHKEVDHVDHLPNPQNGFTPLFNDNDF-SNEHDLDIPIESNLRQELPD- 672
                  +T   + + VD  +H   PQ G  P     +    E  LD P++    +E  + 
Sbjct: 157  ------ITTPVVTEVVD--EHAAKPQAGSKPTAAIAEAEQQELQLDKPLDLYQGEESKEK 208

Query: 673  YGYDYTS---QENGYSG-----YESLVPLPPSDY----IEPCGSIFGYWPCLLKDYQKNV 816
            YG D+ S    +NG  G     YE  V   PS Y    ++ C  +FGYWPCL + Y+K  
Sbjct: 209  YGDDHNSWSGYDNGLRGESGYEYEKQVAQIPSGYGLEAMDLCEGLFGYWPCLSR-YRKRY 267

Query: 817  KQNCYEHG--YGN-EWKGTEEYFFGSSYPYNDSKDDSVGKVDFN--YGYEKHH--VEQPT 975
              +C E     GN  WKGT +Y FGS  PY D +DD  G    N  YGY++H+   +QP 
Sbjct: 268  -SDCQEAAADCGNYRWKGTADYLFGSPDPYGDRRDDDYGGSYGNVIYGYQRHYQQQQQPL 326

Query: 976  YVQEENNEQLWS 1011
            Y Q +++   WS
Sbjct: 327  YHQVDDS---WS 335


>ref|XP_003593396.1| Pro-resilin [Medicago truncatula] gi|355482444|gb|AES63647.1|
           Pro-resilin [Medicago truncatula]
          Length = 314

 Score =  118 bits (295), Expect = 4e-24
 Identities = 78/237 (32%), Positives = 107/237 (45%), Gaps = 29/237 (12%)
 Frame = +1

Query: 316 TSEFNEPDFPEYDTTPYGGGYDISTTYGKPLPPNDIICYPRSSSVPNQ------------ 459
           T EFNEP F EYD TPYGGGYDI +TYGKPL P+D ICYPRS S+P              
Sbjct: 99  TLEFNEPAFDEYDPTPYGGGYDIDSTYGKPLAPSDKICYPRSGSIPTPIPIPIPIPIPIP 158

Query: 460 -NGQKPKVENESIPPSNDNSLTPHEIHKEVDHVDHLPNPQNGFTPLFNDNDFSNEHDLDI 636
              ++ K++ + I P  + +   + + K                P   D+      +   
Sbjct: 159 LPVEEAKLDEKVIKPPQNETKDQNAVEK----------------PQLQDSTIKETSEAYE 202

Query: 637 PIESNLRQELPD-YGYDYTSQENGYSGYESLVPLPPSDY--------IEPCGSIFGYWPC 789
             ES   +E  D Y   ++   +G+   E +  + P  Y        ++ C S+FG WPC
Sbjct: 203 GEESEDSEEKDDGYNSGWSIDGSGFGEIEIVKEVTPPQYPSGYGLETLDICESLFGTWPC 262

Query: 790 LLKDYQKNV-------KQNCYEHGYGNEWKGTEEYFFGSSYPYNDSKDDSVGKVDFN 939
           L K  ++N          NC E    N WK T +Y FG+ YPY   +DD     DFN
Sbjct: 263 LSKMKRENYCNVGIHRGNNCEE----NMWKETADYLFGNPYPYGGRRDD-----DFN 310


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