BLASTX nr result

ID: Coptis24_contig00003851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003851
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273449.1| PREDICTED: UPF0308 protein At2g37240, chloro...   326   6e-87
ref|XP_004142104.1| PREDICTED: thioredoxin-like protein AAED1, c...   323   5e-86
ref|XP_002525198.1| conserved hypothetical protein [Ricinus comm...   322   6e-86
ref|XP_003625564.1| hypothetical protein MTR_7g100540 [Medicago ...   320   3e-85
gb|AFK45062.1| unknown [Lotus japonicus]                              318   9e-85

>ref|XP_002273449.1| PREDICTED: UPF0308 protein At2g37240, chloroplastic [Vitis
           vinifera] gi|297741495|emb|CBI32627.3| unnamed protein
           product [Vitis vinifera] gi|342160850|gb|AEL16461.1|
           type II peroxiredoxin 2 [Vitis vinifera]
          Length = 254

 Score =  326 bits (835), Expect = 6e-87
 Identities = 152/204 (74%), Positives = 175/204 (85%)
 Frame = +1

Query: 163 RITVLTASSNPPGNASTLISEDTQSLLNKVNVFDLNGNATVISDLWKDRKALVAFARHFG 342
           R+   +A+S  PG  S+ +S+DT +LL++  VFDLNGN   ISDLWKDRKA+VAFARHFG
Sbjct: 51  RVITASAASGSPGIESSTVSDDTTNLLDRAQVFDLNGNGIPISDLWKDRKAVVAFARHFG 110

Query: 343 CVLCRKRADYLASVKDKMDAAGVTLILIGPGSIDQAKAFAEQTKFKGEIYADPSHSSYDA 522
           CV CRKRAD LAS KD+MDA+GV L+LIGPGSIDQAKAF+EQT FKGE+YADPSHSSY+ 
Sbjct: 111 CVFCRKRADLLASQKDRMDASGVALVLIGPGSIDQAKAFSEQTNFKGEVYADPSHSSYEV 170

Query: 523 FRFVSGVATTFTPKAGLKIIESYMEGYRQDWGLSFDKDTRTRGGWQQGGIVVAGPGKDNI 702
             FVSGV +TFTP+AGLKII+ YMEGYRQDWGLSF +DT TRGGWQQGGI+VAGPGK NI
Sbjct: 171 LGFVSGVLSTFTPQAGLKIIQLYMEGYRQDWGLSFQRDTVTRGGWQQGGIIVAGPGKSNI 230

Query: 703 SYIHKDKEAGDDPDINDVLEACCS 774
           SYIHKDKEAGDDPD+ D+L ACCS
Sbjct: 231 SYIHKDKEAGDDPDMEDILTACCS 254


>ref|XP_004142104.1| PREDICTED: thioredoxin-like protein AAED1, chloroplastic-like
           [Cucumis sativus] gi|449521503|ref|XP_004167769.1|
           PREDICTED: thioredoxin-like protein AAED1,
           chloroplastic-like [Cucumis sativus]
          Length = 258

 Score =  323 bits (827), Expect = 5e-86
 Identities = 154/201 (76%), Positives = 172/201 (85%)
 Frame = +1

Query: 172 VLTASSNPPGNASTLISEDTQSLLNKVNVFDLNGNATVISDLWKDRKALVAFARHFGCVL 351
           V++A S  PG  S + S +T  LL  V VFDLNGN   ISDLWKDRKA+VAFARHFGCV 
Sbjct: 58  VVSAISGSPGIGSYVESGNTADLLESVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVF 117

Query: 352 CRKRADYLASVKDKMDAAGVTLILIGPGSIDQAKAFAEQTKFKGEIYADPSHSSYDAFRF 531
           CRKRADYLAS KD +DA+GV L+LIGPGSIDQAKAF+EQTKF+GE+YADP+HSSY+A  F
Sbjct: 118 CRKRADYLASKKDLLDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALNF 177

Query: 532 VSGVATTFTPKAGLKIIESYMEGYRQDWGLSFDKDTRTRGGWQQGGIVVAGPGKDNISYI 711
           VSG  TTFTPKAGLKIIE YMEGYRQDW LSF KDT TRGGWQQGGI+VAGPGK+NISYI
Sbjct: 178 VSGFTTTFTPKAGLKIIELYMEGYRQDWNLSFQKDTVTRGGWQQGGIIVAGPGKNNISYI 237

Query: 712 HKDKEAGDDPDINDVLEACCS 774
           HKDKEAGDDPDI ++L+ACCS
Sbjct: 238 HKDKEAGDDPDIQEILKACCS 258


>ref|XP_002525198.1| conserved hypothetical protein [Ricinus communis]
           gi|223535495|gb|EEF37164.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 249

 Score =  322 bits (826), Expect = 6e-86
 Identities = 160/229 (69%), Positives = 186/229 (81%), Gaps = 1/229 (0%)
 Frame = +1

Query: 91  KSPFTPPRSIISLKHSYAPFAKRNRITVLTASSNPPG-NASTLISEDTQSLLNKVNVFDL 267
           ++ FTPP   ++ +  Y     R +  V +A S  PG  +S L++ED   LL+ V V DL
Sbjct: 26  RTSFTPP--FLANRQCYRLLQTRQKHIVCSAISGSPGIESSGLVNED---LLDTVKVLDL 80

Query: 268 NGNATVISDLWKDRKALVAFARHFGCVLCRKRADYLASVKDKMDAAGVTLILIGPGSIDQ 447
            GN   ISDLWKDRKA+VAFARHFGCVLCRKRADYLA+ KD MDA+GV L+LIGPGS+DQ
Sbjct: 81  GGNEIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDIMDASGVALVLIGPGSVDQ 140

Query: 448 AKAFAEQTKFKGEIYADPSHSSYDAFRFVSGVATTFTPKAGLKIIESYMEGYRQDWGLSF 627
           AK F+EQTKFKGE+YAD SHSSY+AF+FVSGV+TTFTPKAGLKIIE YMEGYRQDW LSF
Sbjct: 141 AKTFSEQTKFKGEVYADTSHSSYEAFQFVSGVSTTFTPKAGLKIIELYMEGYRQDWKLSF 200

Query: 628 DKDTRTRGGWQQGGIVVAGPGKDNISYIHKDKEAGDDPDINDVLEACCS 774
           +KDT  RGGW+QGGI+VAGPGK NISYIHKDKEAGDDPDI D+L+ACCS
Sbjct: 201 EKDTVARGGWRQGGIIVAGPGKTNISYIHKDKEAGDDPDIEDILKACCS 249


>ref|XP_003625564.1| hypothetical protein MTR_7g100540 [Medicago truncatula]
           gi|355500579|gb|AES81782.1| hypothetical protein
           MTR_7g100540 [Medicago truncatula]
          Length = 251

 Score =  320 bits (820), Expect = 3e-85
 Identities = 154/202 (76%), Positives = 172/202 (85%)
 Frame = +1

Query: 169 TVLTASSNPPGNASTLISEDTQSLLNKVNVFDLNGNATVISDLWKDRKALVAFARHFGCV 348
           T +  +S   G  S ++ +DT S L  V VFDL GN   ISDLWKDRKA+VAFARHFGCV
Sbjct: 50  TTIPFASGSAGVKSPVLGDDTSSSLELVKVFDLEGNGIPISDLWKDRKAVVAFARHFGCV 109

Query: 349 LCRKRADYLASVKDKMDAAGVTLILIGPGSIDQAKAFAEQTKFKGEIYADPSHSSYDAFR 528
           LCRKRADYLAS KD MDA+GV L+LIGPG+IDQAKAFAEQTKFKGEIYADP+ SSY+A +
Sbjct: 110 LCRKRADYLASKKDIMDASGVALVLIGPGNIDQAKAFAEQTKFKGEIYADPAQSSYEALK 169

Query: 529 FVSGVATTFTPKAGLKIIESYMEGYRQDWGLSFDKDTRTRGGWQQGGIVVAGPGKDNISY 708
           FVSGV TTFTPKAGLKIIE YMEGYRQDW LSF+KDT +RGGWQQGGI+VAGPGK NISY
Sbjct: 170 FVSGVLTTFTPKAGLKIIELYMEGYRQDWKLSFEKDTVSRGGWQQGGIIVAGPGKGNISY 229

Query: 709 IHKDKEAGDDPDINDVLEACCS 774
           IHKDKEAGDDP+I D+L+ACCS
Sbjct: 230 IHKDKEAGDDPEIEDILKACCS 251


>gb|AFK45062.1| unknown [Lotus japonicus]
          Length = 256

 Score =  318 bits (816), Expect = 9e-85
 Identities = 161/257 (62%), Positives = 184/257 (71%)
 Frame = +1

Query: 4   NQNITMATPLVTPPSLINTTKYTYAKNSLKSPFTPPRSIISLKHSYAPFAKRNRITVLTA 183
           N+N         P S +N     Y+KN L                       NR    T 
Sbjct: 19  NKNTNQFPLQAFPTSSLNQNLQLYSKNLLN-------------------LSTNRHHATTL 59

Query: 184 SSNPPGNASTLISEDTQSLLNKVNVFDLNGNATVISDLWKDRKALVAFARHFGCVLCRKR 363
            S   G  S ++SEDT   L+ V VFDLNGN   ISDLWKDRKA+VAFARHFGCVLCRKR
Sbjct: 60  PSASAGVESPVLSEDTTGSLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVLCRKR 119

Query: 364 ADYLASVKDKMDAAGVTLILIGPGSIDQAKAFAEQTKFKGEIYADPSHSSYDAFRFVSGV 543
           ADYLA+ KD MDA+GV L+LIGPGS+DQAKAFAEQTKF GEIYADP+H SY+A  FVSGV
Sbjct: 120 ADYLAAKKDLMDASGVALVLIGPGSVDQAKAFAEQTKFGGEIYADPTHPSYEALNFVSGV 179

Query: 544 ATTFTPKAGLKIIESYMEGYRQDWGLSFDKDTRTRGGWQQGGIVVAGPGKDNISYIHKDK 723
            TTFTP AGLKII+ YMEGYRQDW LSF+KDT +RGGW+QGGI+VAGPGK+NISY+HKDK
Sbjct: 180 LTTFTPNAGLKIIQLYMEGYRQDWKLSFEKDTVSRGGWKQGGIIVAGPGKNNISYLHKDK 239

Query: 724 EAGDDPDINDVLEACCS 774
           EAGDDP+I D+L+ACCS
Sbjct: 240 EAGDDPEIEDILKACCS 256


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