BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003850
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...   101   2e-19
emb|CBI19566.3| unnamed protein product [Vitis vinifera]              101   2e-19
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   101   2e-19
emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]    96   9e-18
ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|2...    95   2e-17

>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Vitis vinifera]
          Length = 409

 Score =  101 bits (251), Expect = 2e-19
 Identities = 49/55 (89%), Positives = 50/55 (90%)
 Frame = -2

Query: 814 FVQFANRNNAEDALQKLNATVIGKQTVRLSWGRNPANKQSRVDRGNQWNNGAYYG 650
           FVQFANRNNAEDALQKLN TVIGKQTVRLSWGRNPANKQ R D GNQW +GAYYG
Sbjct: 318 FVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQW-SGAYYG 371


>emb|CBI19566.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  101 bits (251), Expect = 2e-19
 Identities = 49/55 (89%), Positives = 50/55 (90%)
 Frame = -2

Query: 814 FVQFANRNNAEDALQKLNATVIGKQTVRLSWGRNPANKQSRVDRGNQWNNGAYYG 650
           FVQFANRNNAEDALQKLN TVIGKQTVRLSWGRNPANKQ R D GNQW +GAYYG
Sbjct: 233 FVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQW-SGAYYG 286


>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Vitis vinifera]
          Length = 418

 Score =  101 bits (251), Expect = 2e-19
 Identities = 49/55 (89%), Positives = 50/55 (90%)
 Frame = -2

Query: 814 FVQFANRNNAEDALQKLNATVIGKQTVRLSWGRNPANKQSRVDRGNQWNNGAYYG 650
           FVQFANRNNAEDALQKLN TVIGKQTVRLSWGRNPANKQ R D GNQW +GAYYG
Sbjct: 327 FVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQW-SGAYYG 380


>emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
          Length = 536

 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 49/60 (81%), Positives = 51/60 (85%), Gaps = 5/60 (8%)
 Frame = -2

Query: 814 FVQFANRNNAEDALQKLNATVIGKQTVRLSWGRNPANKQS-----RVDRGNQWNNGAYYG 650
           FVQFANRNNAEDALQKLN TVIGKQTVRLSWGRNPANKQ+     R D GNQW +GAYYG
Sbjct: 215 FVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQANSLFMRADFGNQW-SGAYYG 273


>ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|222835427|gb|EEE73862.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 46/55 (83%), Positives = 49/55 (89%)
 Frame = -2

Query: 814 FVQFANRNNAEDALQKLNATVIGKQTVRLSWGRNPANKQSRVDRGNQWNNGAYYG 650
           FVQFANR+NAE+ALQKLN TVIGKQTVRLSWGRNPANKQ R D G+ W NGAYYG
Sbjct: 335 FVQFANRDNAEEALQKLNGTVIGKQTVRLSWGRNPANKQFRADFGSPW-NGAYYG 388