BLASTX nr result

ID: Coptis24_contig00003829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003829
         (1290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37358.3| unnamed protein product [Vitis vinifera]              185   3e-44
ref|XP_002267137.2| PREDICTED: uncharacterized protein LOC100266...   182   2e-43
ref|XP_002530649.1| conserved hypothetical protein [Ricinus comm...   178   3e-42
ref|XP_003538743.1| PREDICTED: uncharacterized protein LOC100814...   177   7e-42
ref|XP_002304281.1| predicted protein [Populus trichocarpa] gi|2...   174   3e-41

>emb|CBI37358.3| unnamed protein product [Vitis vinifera]
          Length = 1979

 Score =  185 bits (469), Expect = 3e-44
 Identities = 127/374 (33%), Positives = 180/374 (48%), Gaps = 64/374 (17%)
 Frame = -3

Query: 1285 LLEACADGHWKGQQVTSEILSKINKSTEGERASLVGDGIDRNVQPLI------------- 1145
            L+EA  +G+WK  QV SE + ++N +   +  + V +G D++ +                
Sbjct: 1402 LVEAGPEGYWKASQVLSEPVVRLNNTNRVQADNNVEEGPDKHPKDHTRLVDGMPSSVTSS 1461

Query: 1144 EKETEGR------------GEVLHSQ----------------------KSEIEKSSLVEV 1067
            EK++ G+            G V  S+                      ++ I++ SLVEV
Sbjct: 1462 EKDSRGQKGRKVSDLAKTIGVVPESEVGSRSNSIAVQNEYERTTENLKENSIKEGSLVEV 1521

Query: 1066 QVDTEGFNGIWFPAKVLDLHNGKAYVHYRVSFTVEGNSREKEWVSLTEESGKPPKIRLAQ 887
              D +G    WF A VL L + KAYV Y    + EG+ + KEWV+L  E  KPP+IR A 
Sbjct: 1522 FKDGDGSKAAWFSANVLSLKDQKAYVCYVELPSDEGSGQLKEWVALESEGDKPPRIRFAH 1581

Query: 886  LTTAINYEGTRNRRRDARGDHTWCIGDRVDAFMCNGWLEGIIKERTNGIETYYTIQFPAQ 707
              TAI +EGTR RRR A GD+ W +GDRVD ++ N W EG++ E++   ET  T++  AQ
Sbjct: 1582 PMTAIQFEGTRKRRRAAIGDYAWSVGDRVDVWVQNCWCEGVVTEKSRKDETMLTVRISAQ 1641

Query: 706  GERFNIQAFHLRPSLIWKDDYWIEWSSSMGTIGYSSEGDTSHHKRYKLGN---YDAGKEV 536
            GE   ++A+HLRPSLIWKD  WIEWSSS        EGDT   KR KLG+      GK+ 
Sbjct: 1642 GETSVVRAWHLRPSLIWKDGEWIEWSSSRENDHTVHEGDTPQEKRLKLGSPAVEAKGKDK 1701

Query: 535  M-------ESSHNNNPGKL-------VSDASEPRRSHRKIQPTTRLLEGLETSFSRTPAV 398
            M       ++     PG L       + +  +  R   K      +  GL+   SR    
Sbjct: 1702 MSKNIDAVDNEKPEEPGLLALSGNDKIFNVGKNTRDENKPDAPRMIRTGLQKEGSRVIFG 1761

Query: 397  SDGKGTKRQYRSKS 356
                G KR++   S
Sbjct: 1762 VPKPGKKRKFMEVS 1775



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
 Frame = -3

Query: 532  ESSHNNNPGKLVSDASEPRRSHRKIQPTTRLLEGLETS--FSRTPAVSDGKGTKRQYRSK 359
            E  +N NPGK V +A EPRRS+R+IQPT+RLLEGL++S   S+ P+VS  KG K Q RS 
Sbjct: 1913 EKVYNGNPGKSVPEAVEPRRSNRRIQPTSRLLEGLQSSLIISKIPSVSHDKGHKSQNRSA 1972

Query: 358  SLSGN 344
            S   N
Sbjct: 1973 SRGNN 1977


>ref|XP_002267137.2| PREDICTED: uncharacterized protein LOC100266068 [Vitis vinifera]
          Length = 2292

 Score =  182 bits (462), Expect = 2e-43
 Identities = 119/319 (37%), Positives = 166/319 (52%), Gaps = 19/319 (5%)
 Frame = -3

Query: 1255 KGQQVT--SEILSKINKSTEGERASLVGDGIDRNVQPLIEKETEGRGEVLHSQKSEIEKS 1082
            KG++V+  ++ +  + +S  G R++ +       VQ   E+ TE   E      + I++ 
Sbjct: 1748 KGRKVSDLAKTIGVVPESEVGSRSNSIA------VQNEYERTTENLKE------NSIKEG 1795

Query: 1081 SLVEVQVDTEGFNGIWFPAKVLDLHNGKAYVHYRVSFTVEGNSREKEWVSLTEESGKPPK 902
            SLVEV  D +G    WF A VL L + KAYV Y    + EG+ + KEWV+L  E  KPP+
Sbjct: 1796 SLVEVFKDGDGSKAAWFSANVLSLKDQKAYVCYVELPSDEGSGQLKEWVALESEGDKPPR 1855

Query: 901  IRLAQLTTAINYEGTRNRRRDARGDHTWCIGDRVDAFMCNGWLEGIIKERTNGIETYYTI 722
            IR A   TAI +EGTR RRR A GD+ W +GDRVD ++ N W EG++ E++   ET  T+
Sbjct: 1856 IRFAHPMTAIQFEGTRKRRRAAIGDYAWSVGDRVDVWVQNCWCEGVVTEKSRKDETMLTV 1915

Query: 721  QFPAQGERFNIQAFHLRPSLIWKDDYWIEWSSSMGTIGYSSEGDTSHHKRYKLGN---YD 551
            +  AQGE   ++A+HLRPSLIWKD  WIEWSSS        EGDT   KR KLG+     
Sbjct: 1916 RISAQGETSVVRAWHLRPSLIWKDGEWIEWSSSRENDHTVHEGDTPQEKRLKLGSPAVEA 1975

Query: 550  AGKEVM-------ESSHNNNPGKL-------VSDASEPRRSHRKIQPTTRLLEGLETSFS 413
             GK+ M       ++     PG L       + +  +  R   K      +  GL+   S
Sbjct: 1976 KGKDKMSKNIDAVDNEKPEEPGLLALSGNDKIFNVGKNTRDENKPDAPRMIRTGLQKEGS 2035

Query: 412  RTPAVSDGKGTKRQYRSKS 356
            R        G KR++   S
Sbjct: 2036 RVIFGVPKPGKKRKFMEVS 2054



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
 Frame = -3

Query: 532  ESSHNNNPGKLVSDASEPRRSHRKIQPTTRLLEGLETS--FSRTPAVSDGKGTKRQYRSK 359
            E  +N NPGK V +A EPRRS+R+IQPT+RLLEGL++S   S+ P+VS  KG K Q RS 
Sbjct: 2226 EKVYNGNPGKSVPEAVEPRRSNRRIQPTSRLLEGLQSSLIISKIPSVSHDKGHKSQNRSA 2285

Query: 358  SLSGN 344
            S   N
Sbjct: 2286 SRGNN 2290


>ref|XP_002530649.1| conserved hypothetical protein [Ricinus communis]
            gi|223529782|gb|EEF31718.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2104

 Score =  178 bits (451), Expect = 3e-42
 Identities = 106/287 (36%), Positives = 161/287 (56%), Gaps = 8/287 (2%)
 Frame = -3

Query: 1216 NKSTEGERASLVGDGIDRNVQPLIEKETEGRGEVLHSQ--------KSEIEKSSLVEVQV 1061
            +K  +G +AS     + ++++ + E +   R  ++ S+        +S I++ S VEV  
Sbjct: 1563 DKGQKGRKAS----DLTKSIEVVPESQNGSRSSIVRSEFEKAGASKESSIKEDSNVEVFK 1618

Query: 1060 DTEGFNGIWFPAKVLDLHNGKAYVHYRVSFTVEGNSREKEWVSLTEESGKPPKIRLAQLT 881
            D  GF   WF AKVL L +GKAYV+Y    + +G  + KEWV L  E  + PKIR+A+  
Sbjct: 1619 DGNGFKAAWFSAKVLSLKDGKAYVNYTELTSGQGLEKLKEWVPLEGEGDEAPKIRIARPI 1678

Query: 880  TAINYEGTRNRRRDARGDHTWCIGDRVDAFMCNGWLEGIIKERTNGIETYYTIQFPAQGE 701
            T + +EGTR RRR A G+HTW +GDRVDA++ + W EG++ E++   E+  ++ FP QGE
Sbjct: 1679 TIMPFEGTRKRRRAAMGEHTWSVGDRVDAWIQDSWWEGVVTEKSKKDES-VSVSFPGQGE 1737

Query: 700  RFNIQAFHLRPSLIWKDDYWIEWSSSMGTIGYSSEGDTSHHKRYKLGNYDAGKEVMESSH 521
               +  +++RPSLIWKD  WIEWS+S      S EGDT   KR ++ +      ++E+  
Sbjct: 1738 VVAVSKWNIRPSLIWKDGEWIEWSNSGQKNRSSHEGDTPQEKRPRVRS-----SLVEAKG 1792

Query: 520  NNNPGKLVSDASEPRRSHRKIQPTTRLLEGLETSFSRTPAVSDGKGT 380
             +   K + DA+E   S +   PT   L G E  F+   +  DG  T
Sbjct: 1793 KDKASKTI-DATE---SDKSDDPTLLALSGDEKLFNVGKSSKDGNRT 1835


>ref|XP_003538743.1| PREDICTED: uncharacterized protein LOC100814320 [Glycine max]
          Length = 2009

 Score =  177 bits (448), Expect = 7e-42
 Identities = 92/184 (50%), Positives = 117/184 (63%), Gaps = 1/184 (0%)
 Frame = -3

Query: 1102 KSEIEKSSLVEVQVDTEGFNGIWFPAKVLDLHNGKAYVHYRVSFTVEGNSREKEWVSLTE 923
            +S I++  LVEV  D EGF   WF A +L L + KAYV Y      EG    KEWVSL  
Sbjct: 1683 ESSIKEGLLVEVFKDEEGFKAAWFSANILTLKDNKAYVGYTSLVAAEGAGPLKEWVSLEC 1742

Query: 922  ESGKPPKIRLAQLTTAINYEGTRNRRRDARGDHTWCIGDRVDAFMCNGWLEGIIKERTNG 743
            +  KPP+IR A+    + YEGTR RRR A GD+ W +GDRVDA++   W EG+I E+   
Sbjct: 1743 DGDKPPRIRAARPLNTLQYEGTRKRRRAAMGDYAWSVGDRVDAWIQESWQEGVITEKNKK 1802

Query: 742  IETYYTIQFPAQGERFNIQAFHLRPSLIWKDDYWIEWSSSMGTIGYSS-EGDTSHHKRYK 566
             ET +T+ FPA GE   ++A+HLRPSLIWKD  WIE S  +GT   S+ EGDT + KR K
Sbjct: 1803 DETTFTVHFPASGETLVVRAWHLRPSLIWKDGKWIE-SYKVGTNDSSTHEGDTPNEKRPK 1861

Query: 565  LGNY 554
            LG++
Sbjct: 1862 LGSH 1865


>ref|XP_002304281.1| predicted protein [Populus trichocarpa] gi|222841713|gb|EEE79260.1|
            predicted protein [Populus trichocarpa]
          Length = 2105

 Score =  174 bits (442), Expect = 3e-41
 Identities = 88/207 (42%), Positives = 125/207 (60%)
 Frame = -3

Query: 1192 ASLVGDGIDRNVQPLIEKETEGRGEVLHSQKSEIEKSSLVEVQVDTEGFNGIWFPAKVLD 1013
            A+ + D   R    + E E   R        + I++ S VEV  D  G+   WF AKV+D
Sbjct: 1581 ATTLKDAKGRKGYKVSESENGSRSLGTTVDYNCIKEGSHVEVFKDGNGYKAAWFSAKVMD 1640

Query: 1012 LHNGKAYVHYRVSFTVEGNSREKEWVSLTEESGKPPKIRLAQLTTAINYEGTRNRRRDAR 833
            L +GKAYV Y    + EG+ + KEWV+L  E  + PKIR+A+  TA+ +EGTR RRR A 
Sbjct: 1641 LKDGKAYVSYTDLSSAEGSEKLKEWVALKGEGDEAPKIRIARPVTAMPFEGTRKRRRAAM 1700

Query: 832  GDHTWCIGDRVDAFMCNGWLEGIIKERTNGIETYYTIQFPAQGERFNIQAFHLRPSLIWK 653
             D+ W +GD+VDA++ + W EG++ ER+   ET  T+ FP QGE   ++A+HLRPSL+W+
Sbjct: 1701 VDYVWSVGDKVDAWIQDSWWEGVVTERSKKDETMLTVNFPVQGETSVVKAWHLRPSLLWE 1760

Query: 652  DDYWIEWSSSMGTIGYSSEGDTSHHKR 572
            D+ W+EWS S      ++ GDT   KR
Sbjct: 1761 DEEWVEWSGSRAGTHSTNGGDTPQEKR 1787


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