BLASTX nr result

ID: Coptis24_contig00003824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003824
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322973.1| predicted protein [Populus trichocarpa] gi|2...   238   1e-60
ref|XP_002528120.1| ATP binding protein, putative [Ricinus commu...   236   5e-60
ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine...   232   7e-59
ref|XP_002877545.1| hypothetical protein ARALYDRAFT_347816 [Arab...   231   9e-59
ref|NP_190293.1| leucine-rich repeat protein kinase-like protein...   230   2e-58

>ref|XP_002322973.1| predicted protein [Populus trichocarpa] gi|222867603|gb|EEF04734.1|
            predicted protein [Populus trichocarpa]
          Length = 970

 Score =  238 bits (606), Expect = 1e-60
 Identities = 121/244 (49%), Positives = 162/244 (66%)
 Frame = +2

Query: 2    VGNKNLCGGILELKLPPCIQEGIQKTKKTSFLIKVIVPVNVGNLCLLMLSCAFFVWCRRT 181
            VGN  LCGGI EL LPPC +    K  +     KV++P  +  + + +L C+  ++C R 
Sbjct: 548  VGNDKLCGGIPELHLPPCSR----KNPREPLSFKVVIPATIAAVFISVLLCSLSIFCIRR 603

Query: 182  NAEKGPSSKATLFDQFYERISYLELLKATNGFSTNNLIGVGCYGSVFKGVIEDTNRVIAV 361
               +  ++      Q    ISY EL+K+TNGF+  NLIG G +GSV+KG++     ++A+
Sbjct: 604  KLPRNSNTPTPEEQQV--GISYSELIKSTNGFAAENLIGSGSFGSVYKGILSGEGTIVAI 661

Query: 362  KVLNLQREGAPKSFLTESXXXXXXXXXXXXKIITSCSSVDFEGNDFKALVFEFMSNGSLE 541
            K++NL ++GA KSF+ E             KIIT+CS+VD +GNDFK LVFEFMSNG+L+
Sbjct: 662  KIMNLLQKGASKSFIDECNALRSIRHRNLLKIITACSTVDHQGNDFKGLVFEFMSNGNLD 721

Query: 542  EWLHPVVDEQHLRYKSLNFTQGLNIAIDVACALEYLHHYCQPGIVHRDLKPSNVLLDDAM 721
            +WLHP  ++Q+ R K L+FTQ LNIAIDVA AL+YLHH C+  IVH DLKPSNVLLDD M
Sbjct: 722  QWLHPTTEQQY-RTKKLSFTQRLNIAIDVASALDYLHHQCKTTIVHCDLKPSNVLLDDDM 780

Query: 722  TAHV 733
            TAHV
Sbjct: 781  TAHV 784


>ref|XP_002528120.1| ATP binding protein, putative [Ricinus communis]
           gi|223532509|gb|EEF34299.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 468

 Score =  236 bits (601), Expect = 5e-60
 Identities = 121/244 (49%), Positives = 161/244 (65%)
 Frame = +2

Query: 2   VGNKNLCGGILELKLPPCIQEGIQKTKKTSFLIKVIVPVNVGNLCLLMLSCAFFVWCRRT 181
           VGN  LCGG ++L LP C        KK     K+++P  +  + +++ SC   ++C   
Sbjct: 53  VGNDKLCGGTVDLLLPTC------SNKKQGKTFKIVIPAAIAGVFVIVASCIVAIFCMAR 106

Query: 182 NAEKGPSSKATLFDQFYERISYLELLKATNGFSTNNLIGVGCYGSVFKGVIEDTNRVIAV 361
           N+ K  S+     +++   ISY EL K+T+GFS  NLIG+G +GSV+KGV+     ++AV
Sbjct: 107 NSRKKHSAAP---EEWQVGISYTELAKSTDGFSAENLIGLGSFGSVYKGVLSGNGEIVAV 163

Query: 362 KVLNLQREGAPKSFLTESXXXXXXXXXXXXKIITSCSSVDFEGNDFKALVFEFMSNGSLE 541
           KVLNLQ++GA KSF+ E             +IIT+CSS+D +GNDFKALVFEFM+N SL+
Sbjct: 164 KVLNLQQQGASKSFIDECNALRSIRHRNLIRIITTCSSIDHQGNDFKALVFEFMANRSLD 223

Query: 542 EWLHPVVDEQHLRYKSLNFTQGLNIAIDVACALEYLHHYCQPGIVHRDLKPSNVLLDDAM 721
           +WLHP  DEQ  R   L+F + LNIAID+A AL+YLHHYC+  IVH DLKPSNVLLD  M
Sbjct: 224 DWLHPKADEQD-RTMRLSFIKRLNIAIDIASALDYLHHYCETPIVHCDLKPSNVLLDKNM 282

Query: 722 TAHV 733
           TAHV
Sbjct: 283 TAHV 286


>ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like, partial [Vitis vinifera]
          Length = 965

 Score =  232 bits (591), Expect = 7e-59
 Identities = 126/249 (50%), Positives = 162/249 (65%), Gaps = 5/249 (2%)
 Frame = +2

Query: 2    VGNKNLCGGILELKLPPCIQEGIQKTKKT--SFLIKVIVPVNVGNLCLL-MLSCAFFVWC 172
            +GN  LCGGI E +LP C    +Q+ KK   S  +K+I+    G L +  +LS   F+W 
Sbjct: 551  MGNSKLCGGIPEFQLPKC---NLQEPKKRGLSLALKIIIATVSGLLAITCVLSFLIFLWL 607

Query: 173  RRTNAEKGPSSKATLFDQFYERISYLELLKATNGFSTNNLIGVGCYGSVFKGVIEDTNRV 352
            R+   E   SS     ++   ++SY  LL+AT+GFS++NLIGVG +GSV+KG+++     
Sbjct: 608  RKKKGEPASSSS----EKSLLKVSYQSLLRATDGFSSSNLIGVGSFGSVYKGILDHDGTA 663

Query: 353  IAVKVLNLQREGAPKSFLTESXXXXXXXXXXXXKIITSCSSVDFEGNDFKALVFEFMSNG 532
            IAVKVLNL R+GA KSF+ E             K++T+CS VD++GNDFKA+V+EFM NG
Sbjct: 664  IAVKVLNLLRKGASKSFIAECEALRNIRHRNLVKVLTACSGVDYQGNDFKAVVYEFMVNG 723

Query: 533  SLEEWLH--PVVDEQHLRYKSLNFTQGLNIAIDVACALEYLHHYCQPGIVHRDLKPSNVL 706
            SLE+WLH  P   E     + LNF Q LNIAIDVACAL+YLHH CQ  IVH DLKPSNVL
Sbjct: 724  SLEQWLHPTPTTAEASAPPRKLNFLQRLNIAIDVACALDYLHHQCQTPIVHCDLKPSNVL 783

Query: 707  LDDAMTAHV 733
            LD  MT HV
Sbjct: 784  LDTEMTGHV 792


>ref|XP_002877545.1| hypothetical protein ARALYDRAFT_347816 [Arabidopsis lyrata subsp.
            lyrata] gi|297323383|gb|EFH53804.1| hypothetical protein
            ARALYDRAFT_347816 [Arabidopsis lyrata subsp. lyrata]
          Length = 1013

 Score =  231 bits (590), Expect = 9e-59
 Identities = 123/246 (50%), Positives = 167/246 (67%), Gaps = 3/246 (1%)
 Frame = +2

Query: 8    NKNLCGGILELKLPPCI-QEGIQKTKKTSFLIKVIVPVNVGNLCLLMLSCAFFVWCR-RT 181
            NKNLCGGI ELKL PCI Q     TK  S L KV++ V+VG   LL+L      W + R 
Sbjct: 614  NKNLCGGIKELKLKPCIVQTPPMGTKHPSLLRKVVIGVSVGIALLLLLFVVSLRWFKKRK 673

Query: 182  NAEKGPSSKATLFDQFYERISYLELLKATNGFSTNNLIGVGCYGSVFKGVIEDTNRVIAV 361
              +K  +S  +  D F+E+ISY +L  AT+GFS++N++G+G +G+VFK ++   ++ +AV
Sbjct: 674  KNQKTNNSALSTLDIFHEKISYGDLRNATDGFSSSNMVGLGSFGTVFKALLPTESKTVAV 733

Query: 362  KVLNLQREGAPKSFLTESXXXXXXXXXXXXKIITSCSSVDFEGNDFKALVFEFMSNGSLE 541
            KVLNLQR GA KSF+ E             K++T+C+SVDF+GN+F+AL++EFM NG+L+
Sbjct: 734  KVLNLQRHGAMKSFMAECESLKDIRHRNLVKLLTACASVDFQGNEFRALIYEFMPNGNLD 793

Query: 542  EWLHP-VVDEQHLRYKSLNFTQGLNIAIDVACALEYLHHYCQPGIVHRDLKPSNVLLDDA 718
             WLHP  V+E     ++L   + LNIAIDVA AL+YLH YC   IVH D+KPSNVLLDD 
Sbjct: 794  MWLHPEEVEEIRRPSRTLTLLERLNIAIDVASALDYLHVYCHEQIVHCDIKPSNVLLDDD 853

Query: 719  MTAHVA 736
            +TAHV+
Sbjct: 854  LTAHVS 859


>ref|NP_190293.1| leucine-rich repeat protein kinase-like protein [Arabidopsis
            thaliana] gi|6522590|emb|CAB61955.1| receptor kinase-like
            protein [Arabidopsis thaliana]
            gi|332644721|gb|AEE78242.1| leucine-rich repeat protein
            kinase-like protein [Arabidopsis thaliana]
          Length = 1009

 Score =  230 bits (587), Expect = 2e-58
 Identities = 118/247 (47%), Positives = 168/247 (68%), Gaps = 3/247 (1%)
 Frame = +2

Query: 5    GNKNLCGGILELKLPPCIQEGIQ-KTKKTSFLIKVIVPVNVGNLCLLMLSCAFFVWCR-R 178
            GNKNLCG I ELKL PCI +    +T+  S L KV + V+VG   LL+L      W + R
Sbjct: 609  GNKNLCGSIKELKLKPCIAQAPPVETRHPSLLKKVAIGVSVGIALLLLLFIVSLSWFKKR 668

Query: 179  TNAEKGPSSKATLFDQFYERISYLELLKATNGFSTNNLIGVGCYGSVFKGVIEDTNRVIA 358
             N +K  +S     + F+E++SY +L  AT+GFS++N++G G +G+VFK +++  N+++A
Sbjct: 669  KNNQKINNSAPFTLEIFHEKLSYGDLRNATDGFSSSNIVGSGSFGTVFKALLQTENKIVA 728

Query: 359  VKVLNLQREGAPKSFLTESXXXXXXXXXXXXKIITSCSSVDFEGNDFKALVFEFMSNGSL 538
            VKVLN+QR GA KSF+ E             K++T+C+S+DF+GN+F+AL++EFM NGSL
Sbjct: 729  VKVLNMQRRGAMKSFMAECESLKDIRHRNLVKLLTACASIDFQGNEFRALIYEFMPNGSL 788

Query: 539  EEWLHP-VVDEQHLRYKSLNFTQGLNIAIDVACALEYLHHYCQPGIVHRDLKPSNVLLDD 715
            ++WLHP  V+E H   ++L   + LNIAIDVA  L+YLH +C   I H DLKPSN+LLDD
Sbjct: 789  DKWLHPEEVEEIHRPSRTLTLLERLNIAIDVASVLDYLHVHCHEPIAHCDLKPSNILLDD 848

Query: 716  AMTAHVA 736
             +TAHV+
Sbjct: 849  DLTAHVS 855


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