BLASTX nr result

ID: Coptis24_contig00003822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003822
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI96983.1| phytocyanin-like arabinogalactan-protein [Gossypi...   102   4e-20
ref|XP_002324335.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|NP_180078.2| early nodulin-like protein 1 [Arabidopsis thali...    93   2e-17
ref|XP_002878823.1| hypothetical protein ARALYDRAFT_481360 [Arab...    93   2e-17
ref|XP_002308708.1| predicted protein [Populus trichocarpa] gi|1...    93   2e-17

>gb|ABI96983.1| phytocyanin-like arabinogalactan-protein [Gossypium hirsutum]
           gi|115393870|gb|ABI96984.1| phytocyanin-like
           arabinogalactan-protein [Gossypium hirsutum]
          Length = 175

 Score =  102 bits (253), Expect = 4e-20
 Identities = 57/120 (47%), Positives = 74/120 (61%)
 Frame = +3

Query: 3   DSVLQVNKTDYVTCNTSNPIVVYRNETVMIVLLRSGPFYFISGAKGHCQQGQKMTVVVLS 182
           DSVLQV+K DY +CNTSNPI  Y++    + L +SGP++F+SGAKGHC+QGQKM VVV+S
Sbjct: 71  DSVLQVSKEDYTSCNTSNPIAEYKDGNTKVKLEKSGPYFFMSGAKGHCEQGQKMIVVVMS 130

Query: 183 DIHTYKGXXXXXXXXXXXXRGGPAIAPSPVVFGDGPAVSPSPVVFHVAPAVARTGAVSGL 362
             H Y G                + APSPV F +GPAV+P+  V  +   +  T  V GL
Sbjct: 131 QKHRYIGI---------------SPAPSPVDF-EGPAVAPTSGVAGLKAGLLVTVGVLGL 174


>ref|XP_002324335.1| predicted protein [Populus trichocarpa] gi|222865769|gb|EEF02900.1|
           predicted protein [Populus trichocarpa]
          Length = 214

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 63/138 (45%), Positives = 75/138 (54%)
 Frame = +3

Query: 3   DSVLQVNKTDYVTCNTSNPIVVYRNETVMIVLLRSGPFYFISGAKGHCQQGQKMTVVVLS 182
           DSVLQV K  Y  CNT+NPI  Y++    + L +SGPFYFISGA+GHC++GQK+ VVVLS
Sbjct: 106 DSVLQVTKEAYAACNTTNPIEEYKDGNTKVKLDKSGPFYFISGAEGHCEKGQKIVVVVLS 165

Query: 183 DIHTYKGXXXXXXXXXXXXRGGPAIAPSPVVFGDGPAVSPSPVVFHVAPAVARTGAVSGL 362
             H   G             G P  APSPV F              V PAVART + S L
Sbjct: 166 QKHKQVGYV-----------GSP--APSPVEF--------------VGPAVARTSSASNL 198

Query: 363 RSSVFNGPLFLAFGSLLL 416
           R     G L +A G L+L
Sbjct: 199 R-----GGLLVALGVLVL 211


>ref|NP_180078.2| early nodulin-like protein 1 [Arabidopsis thaliana]
           gi|115502384|sp|Q9SK27.2|ENL1_ARATH RecName: Full=Early
           nodulin-like protein 1; AltName: Full=Phytocyanin-like
           protein; Flags: Precursor gi|51969542|dbj|BAD43463.1|
           early nodulin-like 1 predicted GPI-anchored protein
           [Arabidopsis thaliana] gi|51969612|dbj|BAD43498.1| early
           nodulin-like 1 predicted GPI-anchored protein
           [Arabidopsis thaliana] gi|51971833|dbj|BAD44581.1| early
           nodulin-like 1 predicted GPI-anchored protein
           [Arabidopsis thaliana] gi|330252559|gb|AEC07653.1| early
           nodulin-like protein 1 [Arabidopsis thaliana]
          Length = 182

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/103 (45%), Positives = 64/103 (62%)
 Frame = +3

Query: 3   DSVLQVNKTDYVTCNTSNPIVVYRNETVMIVLLRSGPFYFISGAKGHCQQGQKMTVVVLS 182
           DSVL+V K  Y +CNT+NP+  Y +    + L RSGPFYFISGA GHC++GQK+++VV+S
Sbjct: 74  DSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVIS 133

Query: 183 DIHTYKGXXXXXXXXXXXXRGGPAIAPSPVVFGDGPAVSPSPV 311
             H+                     APSPV F DGPA++P+P+
Sbjct: 134 PRHSVISP-----------------APSPVEFEDGPALAPAPI 159


>ref|XP_002878823.1| hypothetical protein ARALYDRAFT_481360 [Arabidopsis lyrata subsp.
           lyrata] gi|297324662|gb|EFH55082.1| hypothetical protein
           ARALYDRAFT_481360 [Arabidopsis lyrata subsp. lyrata]
          Length = 177

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/102 (46%), Positives = 63/102 (61%)
 Frame = +3

Query: 3   DSVLQVNKTDYVTCNTSNPIVVYRNETVMIVLLRSGPFYFISGAKGHCQQGQKMTVVVLS 182
           DSVL+V K  Y +CNT+NP+  Y +    + L RSGPFYFISGA GHC++GQK+++VV+S
Sbjct: 68  DSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVIS 127

Query: 183 DIHTYKGXXXXXXXXXXXXRGGPAIAPSPVVFGDGPAVSPSP 308
             H+                     APSPV F DGPA++P+P
Sbjct: 128 PRHSVSSP-----------------APSPVEFEDGPALAPAP 152


>ref|XP_002308708.1| predicted protein [Populus trichocarpa] gi|118484663|gb|ABK94202.1|
           unknown [Populus trichocarpa]
           gi|222854684|gb|EEE92231.1| predicted protein [Populus
           trichocarpa]
          Length = 179

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 54/141 (38%), Positives = 73/141 (51%)
 Frame = +3

Query: 3   DSVLQVNKTDYVTCNTSNPIVVYRNETVMIVLLRSGPFYFISGAKGHCQQGQKMTVVVLS 182
           DSVLQV K  Y +CNT++PI  Y++    + L RSGPFYFISGA+GHC++GQK  V+VLS
Sbjct: 70  DSVLQVTKEAYASCNTTSPIEEYKDGNTKVKLDRSGPFYFISGAEGHCEKGQKFVVLVLS 129

Query: 183 DIHTYKGXXXXXXXXXXXXRGGPAIAPSPVVFGDGPAVSPSPVVFHVAPAVARTGAVSGL 362
             H + G                + APSP  F  GPAV+P+   +               
Sbjct: 130 QKHRHTGI---------------SPAPSPAEFEGGPAVAPTSSAY--------------- 159

Query: 363 RSSVFNGPLFLAFGSLLLEMV 425
                 G   +AFG L+L ++
Sbjct: 160 ---TLRGGFLVAFGVLVLGLI 177


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