BLASTX nr result

ID: Coptis24_contig00003807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003807
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32690.3| unnamed protein product [Vitis vinifera]              107   3e-21
ref|XP_002275005.1| PREDICTED: uncharacterized protein LOC100258...   107   3e-21
ref|XP_003537892.1| PREDICTED: uncharacterized protein LOC100802...   105   8e-21
ref|NP_850389.1| ribonuclease P-like protein [Arabidopsis thalia...   105   1e-20
ref|NP_001189739.1| ribonuclease P-like protein [Arabidopsis tha...   105   1e-20

>emb|CBI32690.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  107 bits (267), Expect = 3e-21
 Identities = 48/67 (71%), Positives = 59/67 (88%)
 Frame = +3

Query: 3   GAIFRVAECKVTSYLGVSGIMVRETAETFGIITRDNKFQVVPKRGSVFLFQADCWKITLH 182
           GAI  V ECK+ ++ GVSGIM+RETAET GIIT+D+KF+VVPK+GSVF+FQADCWK+TL 
Sbjct: 236 GAIILVVECKIAAFNGVSGIMIRETAETLGIITQDDKFRVVPKKGSVFIFQADCWKVTLQ 295

Query: 183 GDELVSR 203
           GD+L SR
Sbjct: 296 GDKLTSR 302


>ref|XP_002275005.1| PREDICTED: uncharacterized protein LOC100258470 [Vitis vinifera]
          Length = 300

 Score =  107 bits (267), Expect = 3e-21
 Identities = 48/67 (71%), Positives = 59/67 (88%)
 Frame = +3

Query: 3   GAIFRVAECKVTSYLGVSGIMVRETAETFGIITRDNKFQVVPKRGSVFLFQADCWKITLH 182
           GAI  V ECK+ ++ GVSGIM+RETAET GIIT+D+KF+VVPK+GSVF+FQADCWK+TL 
Sbjct: 230 GAIILVVECKIAAFNGVSGIMIRETAETLGIITQDDKFRVVPKKGSVFIFQADCWKVTLQ 289

Query: 183 GDELVSR 203
           GD+L SR
Sbjct: 290 GDKLTSR 296


>ref|XP_003537892.1| PREDICTED: uncharacterized protein LOC100802747 [Glycine max]
          Length = 300

 Score =  105 bits (263), Expect = 8e-21
 Identities = 47/68 (69%), Positives = 56/68 (82%)
 Frame = +3

Query: 3   GAIFRVAECKVTSYLGVSGIMVRETAETFGIITRDNKFQVVPKRGSVFLFQADCWKITLH 182
           GA   V ECK+T + G+ GIM+RETAE FGIIT DNKF+VVPK+ SVF+FQ DCWK+TLH
Sbjct: 230 GAFILVVECKITHFTGICGIMIRETAEAFGIITEDNKFRVVPKKVSVFVFQVDCWKVTLH 289

Query: 183 GDELVSRK 206
           GD+L SRK
Sbjct: 290 GDKLGSRK 297


>ref|NP_850389.1| ribonuclease P-like protein [Arabidopsis thaliana]
           gi|42571209|ref|NP_973678.1| ribonuclease P-like protein
           [Arabidopsis thaliana] gi|330255131|gb|AEC10225.1|
           ribonuclease P-like protein [Arabidopsis thaliana]
           gi|330255132|gb|AEC10226.1| ribonuclease P-like protein
           [Arabidopsis thaliana]
          Length = 295

 Score =  105 bits (262), Expect = 1e-20
 Identities = 48/67 (71%), Positives = 57/67 (85%)
 Frame = +3

Query: 3   GAIFRVAECKVTSYLGVSGIMVRETAETFGIITRDNKFQVVPKRGSVFLFQADCWKITLH 182
           GA   VAECK+ S+ GV GIMVRET+ETFGIITRD+KF+VVPK+ SVF+ Q DCWKITLH
Sbjct: 223 GAFMFVAECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLH 282

Query: 183 GDELVSR 203
           GD+ +SR
Sbjct: 283 GDKFISR 289


>ref|NP_001189739.1| ribonuclease P-like protein [Arabidopsis thaliana]
           gi|330255133|gb|AEC10227.1| ribonuclease P-like protein
           [Arabidopsis thaliana]
          Length = 261

 Score =  105 bits (262), Expect = 1e-20
 Identities = 48/67 (71%), Positives = 57/67 (85%)
 Frame = +3

Query: 3   GAIFRVAECKVTSYLGVSGIMVRETAETFGIITRDNKFQVVPKRGSVFLFQADCWKITLH 182
           GA   VAECK+ S+ GV GIMVRET+ETFGIITRD+KF+VVPK+ SVF+ Q DCWKITLH
Sbjct: 189 GAFMFVAECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLH 248

Query: 183 GDELVSR 203
           GD+ +SR
Sbjct: 249 GDKFISR 255


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