BLASTX nr result

ID: Coptis24_contig00003799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003799
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612573.1| Ankyrin repeat domain-containing protein [Me...   265   1e-68
ref|XP_004148983.1| PREDICTED: ankyrin-3-like [Cucumis sativus] ...   254   4e-65
ref|NP_001241566.1| uncharacterized protein LOC100818162 [Glycin...   254   4e-65
ref|XP_002268442.1| PREDICTED: ankyrin-2 [Vitis vinifera] gi|296...   254   4e-65
ref|XP_002304390.1| predicted protein [Populus trichocarpa] gi|2...   253   7e-65

>ref|XP_003612573.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
           gi|355513908|gb|AES95531.1| Ankyrin repeat
           domain-containing protein [Medicago truncatula]
          Length = 203

 Score =  265 bits (678), Expect = 1e-68
 Identities = 125/150 (83%), Positives = 134/150 (89%)
 Frame = -2

Query: 887 RNLSGRRLLYRCAVDMDDRGWTSLHIVSKKGDLKKVKRLLNEGMDVNVSAWGPKWQGVTP 708
           R  S RR L R  VD DDRGWTSLH+ ++KGD+K VKRLLNEGMDVNV+AWGPK +GVTP
Sbjct: 41  RQSSSRRRLLRPGVDTDDRGWTSLHVYARKGDIKLVKRLLNEGMDVNVTAWGPKSKGVTP 100

Query: 707 LHLAAQGGHLKVMDALLERGANIDARTKGACGWTPLHNAAKERNRDAIKFLVENGAFLPD 528
           LHLAA+GGHL VMD LLERGANIDARTKGACGWTPLH AAKERNRDA+KFLVENGAFLP 
Sbjct: 101 LHLAAEGGHLGVMDELLERGANIDARTKGACGWTPLHIAAKERNRDAVKFLVENGAFLPP 160

Query: 527 DINDSRFNPPLHYCPGLEWAYEEMKRLQDE 438
           DINDSRFNPPLHYCPGLEWAYEEMKRL+ E
Sbjct: 161 DINDSRFNPPLHYCPGLEWAYEEMKRLRQE 190


>ref|XP_004148983.1| PREDICTED: ankyrin-3-like [Cucumis sativus]
           gi|449532583|ref|XP_004173260.1| PREDICTED:
           ankyrin-3-like [Cucumis sativus]
          Length = 173

 Score =  254 bits (648), Expect = 4e-65
 Identities = 122/163 (74%), Positives = 138/163 (84%)
 Frame = -2

Query: 923 MGQEESGGSVYKRNLSGRRLLYRCAVDMDDRGWTSLHIVSKKGDLKKVKRLLNEGMDVNV 744
           M QE+   S   R+LS RR       + DDRGWTSLHI ++KGDLK+VKRLLN+GMDVN 
Sbjct: 1   MPQEQR--SPISRSLSRRRSFRYEVFNTDDRGWTSLHIGARKGDLKEVKRLLNDGMDVNS 58

Query: 743 SAWGPKWQGVTPLHLAAQGGHLKVMDALLERGANIDARTKGACGWTPLHNAAKERNRDAI 564
            AWGPK +G+TPLHLAA+GGHL+VMD LLERGANIDARTKGACGWTPLH+AAKER ++A+
Sbjct: 59  IAWGPKSKGLTPLHLAAEGGHLEVMDELLERGANIDARTKGACGWTPLHSAAKERRKEAV 118

Query: 563 KFLVENGAFLPDDINDSRFNPPLHYCPGLEWAYEEMKRLQDEN 435
           KFLVENGAFLPDDIND RFNPPLHYCPGLEWAYEEMKRL  +N
Sbjct: 119 KFLVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEMKRLHHDN 161


>ref|NP_001241566.1| uncharacterized protein LOC100818162 [Glycine max]
           gi|255647501|gb|ACU24214.1| unknown [Glycine max]
          Length = 172

 Score =  254 bits (648), Expect = 4e-65
 Identities = 119/160 (74%), Positives = 140/160 (87%)
 Frame = -2

Query: 914 EESGGSVYKRNLSGRRLLYRCAVDMDDRGWTSLHIVSKKGDLKKVKRLLNEGMDVNVSAW 735
           EE    +++++ S RRL  R A D DDRGWTSLH+ ++KG+LK VK+L+NEGMDVNVSAW
Sbjct: 3   EEQPVVLFRKSPSRRRL--RSAFDTDDRGWTSLHVFARKGELKLVKKLINEGMDVNVSAW 60

Query: 734 GPKWQGVTPLHLAAQGGHLKVMDALLERGANIDARTKGACGWTPLHNAAKERNRDAIKFL 555
           GPK +GVTPLHLAA+GGH+ VMD LLERGA+IDARTKGACGWTPLH AAKER RDA+KFL
Sbjct: 61  GPKSKGVTPLHLAAEGGHIGVMDVLLERGADIDARTKGACGWTPLHIAAKERRRDAVKFL 120

Query: 554 VENGAFLPDDINDSRFNPPLHYCPGLEWAYEEMKRLQDEN 435
           +ENGAF+P DI+DSRFNPPLHYCPGLEWAYEEMKRL+ E+
Sbjct: 121 LENGAFMPPDISDSRFNPPLHYCPGLEWAYEEMKRLRQED 160


>ref|XP_002268442.1| PREDICTED: ankyrin-2 [Vitis vinifera] gi|296085508|emb|CBI29240.3|
           unnamed protein product [Vitis vinifera]
          Length = 174

 Score =  254 bits (648), Expect = 4e-65
 Identities = 120/153 (78%), Positives = 137/153 (89%)
 Frame = -2

Query: 893 YKRNLSGRRLLYRCAVDMDDRGWTSLHIVSKKGDLKKVKRLLNEGMDVNVSAWGPKWQGV 714
           ++RNLS +R  +R AV  DDRGWT LH+ ++KGDL +V+RLL+EGMDVNV+A GPK +GV
Sbjct: 9   FRRNLSKKRS-FRAAVGGDDRGWTLLHVGARKGDLNEVRRLLDEGMDVNVAACGPKSKGV 67

Query: 713 TPLHLAAQGGHLKVMDALLERGANIDARTKGACGWTPLHNAAKERNRDAIKFLVENGAFL 534
           TPLHLAAQGGHL+VMD LLERGANIDARTKGACGWTPLHNAAKERN+DAIKFL+ENGAFL
Sbjct: 68  TPLHLAAQGGHLRVMDELLERGANIDARTKGACGWTPLHNAAKERNKDAIKFLIENGAFL 127

Query: 533 PDDINDSRFNPPLHYCPGLEWAYEEMKRLQDEN 435
             DIND+RFNPPLHYC GLEWAYEEMKR+Q EN
Sbjct: 128 AADINDNRFNPPLHYCTGLEWAYEEMKRIQQEN 160


>ref|XP_002304390.1| predicted protein [Populus trichocarpa] gi|222841822|gb|EEE79369.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  253 bits (646), Expect = 7e-65
 Identities = 123/164 (75%), Positives = 137/164 (83%), Gaps = 1/164 (0%)
 Frame = -2

Query: 923 MGQEESGGSVYKRNLSGRRLLYRCA-VDMDDRGWTSLHIVSKKGDLKKVKRLLNEGMDVN 747
           M QE S     +RNLS RR       VD DDRGW  LHI ++KGDLK+VKRLL+EGMDVN
Sbjct: 1   MPQEASVAVSLRRNLSRRRSSRSVGDVDRDDRGWNLLHIGARKGDLKQVKRLLDEGMDVN 60

Query: 746 VSAWGPKWQGVTPLHLAAQGGHLKVMDALLERGANIDARTKGACGWTPLHNAAKERNRDA 567
           V AWGPK +G+TPLHLAAQGGHL++M  LLERGANIDART GACGWTPLH+AAKER ++A
Sbjct: 61  VPAWGPKSKGLTPLHLAAQGGHLEIMAELLERGANIDARTLGACGWTPLHSAAKERKKEA 120

Query: 566 IKFLVENGAFLPDDINDSRFNPPLHYCPGLEWAYEEMKRLQDEN 435
           +KFL+ENGAFLPDDINDSRFNPPLHYCPGLEWAYEEMKR Q EN
Sbjct: 121 VKFLIENGAFLPDDINDSRFNPPLHYCPGLEWAYEEMKRHQREN 164


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