BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003778
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACM17560.1| NBS-LRR disease resistance protein family-2 [Oryz...    61   8e-08
ref|XP_003599073.1| Cc-nbs-lrr resistance protein [Medicago trun...    57   2e-06
ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_001773946.1| predicted protein [Physcomitrella patens sub...    56   3e-06

>gb|ACM17560.1| NBS-LRR disease resistance protein family-2 [Oryza brachyantha]
          Length = 1297

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
 Frame = -1

Query: 395  MRMMSNITYLVLCNCPNLNVEPHYLFP-PRLETLVLDGNVGVLSKSLMSLTHNNNLKTLI 219
            MR +S++  L+L  C  +   P +L   P L  L ++   G+ S    S+    +LK L 
Sbjct: 1162 MRQLSSLRCLILSECARMTSLPDWLEDLPSLRDLRIESCAGLSSLEGGSMERLTSLKWLA 1221

Query: 218  IFSLPH-SSLPQGLNQLTSLQKLRFFDCKTLHFKPEELKPLTMLRKLVINACSDRTLKK 45
            +   P  ++LP+ L +LTSL  L  F+C  + F PE ++ LT L  L ++AC +  LKK
Sbjct: 1222 LSCCPSIAALPESLGELTSLTYLGIFECPNIKFLPESIQRLTNLNTLTVSACPE--LKK 1278


>ref|XP_003599073.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
            gi|355488121|gb|AES69324.1| Cc-nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 1145

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 53/174 (30%), Positives = 72/174 (41%), Gaps = 34/174 (19%)
 Frame = -1

Query: 422  WMMSTLPTWMRMMSNITYLVLCNCPNLNVEPHYLFPPRLETLVLDGNVGVL-SKSLMSLT 246
            W  S+LP    + +N+ YL L +CP L   P    P  L  LV+     ++ S+    L 
Sbjct: 967  WHSSSLPFTPHLFTNLHYLELSDCPQLESFPRGGLPSNLSKLVIQNCPKLIGSREDWGLF 1026

Query: 245  HNNNLKTLIIF-------SLPHSSL--------------------PQGLNQLTSLQKLRF 147
              N+LK+  +        S P  SL                     +GL  L SLQ L  
Sbjct: 1027 QLNSLKSFRVVDDFKNVESFPEESLLPPTLHTLCLYNCSKLRIMNYKGLLHLKSLQSLNI 1086

Query: 146  FDCKTLHFKPEELKPLTMLRKLVINACS---DRTLKKD---WSILTHISIIKID 3
              C  L   PEE  P++ L  L IN CS   ++  KK+   W  + HI  IKID
Sbjct: 1087 LSCPCLESLPEEGLPIS-LSTLAINRCSLLKEKYQKKEGERWHTIRHIPSIKID 1139


>ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|222844717|gb|EEE82264.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
 Frame = -1

Query: 416 MSTLPTWMRMMSNITYLVLCNCPNLNVEPHYLFPPRLETL-VLDGNVGVLSKSLMSLTHN 240
           + +LP  ++ ++++  L +   P +   P    P  + +L +LD     L+     L H 
Sbjct: 305 LESLPEGVQNLNSLEMLFIYGMPKITTLPG--LPSSIASLDILDCQE--LTSISEGLQHL 360

Query: 239 NNLKTLIIFS-LPHSSLPQGLNQLTSLQKLRFFDCKTLHFKPEELKPLTMLRKLVINACS 63
             LK L +   +  +SLP+ +  LTSL +LR   C  L   PE ++ L MLR+LVI  C 
Sbjct: 361 TALKDLYLHGCVKLNSLPESIQHLTSLSRLRIHGCSNLMSLPEGIRNLEMLRELVITECR 420

Query: 62  D------RTLKKDWSILTHISIIKID 3
           +      +  +KDW  + HI  I I+
Sbjct: 421 NLERRCKKEKEKDWPKIAHIPTIIIN 446


>ref|XP_001773946.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162674790|gb|EDQ61294.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 528

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 26/165 (15%)
 Frame = -1

Query: 422 WMMSTLPTWMRMMSNITYLVLCNCPNLNVEPHYLFP-PRLETLVLDGNVGVLSK-----S 261
           W +++LP  +  ++++ +L LC+C  L   P+ L     L +L + G + + S      +
Sbjct: 127 WKLTSLPNELGNLTSLAFLNLCDCSRLTSLPNELGNLTTLTSLNISGCLKLTSLPNELGN 186

Query: 260 LMSLTHNNNLKTLIIFSLPH-------------------SSLPQGLNQLTSLQKLRFFDC 138
           L SLT  N  +   + SLP+                   +SLP  LN LTSL  L  F+C
Sbjct: 187 LTSLTSLNLSRCWKLISLPNELGNLISLTSLNLSGCWELTSLPNDLNNLTSLVSLNLFEC 246

Query: 137 KTLHFKPEELKPLTMLRKLVINACSDRT-LKKDWSILTHISIIKI 6
            +L   P EL  LT L  L I+ C   T L  +   LT ++ + +
Sbjct: 247 PSLIILPNELGNLTTLTSLNISECLKLTSLPNELGNLTSLTSLNL 291