BLASTX nr result
ID: Coptis24_contig00003772
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003772
(1944 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95414.1| transposon protein, putative, unclassified [Oryza... 490 e-136
gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japo... 490 e-136
ref|XP_003532941.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l... 456 e-126
gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [... 453 e-125
ref|XP_002461440.1| hypothetical protein SORBIDRAFT_02g002703 [S... 400 e-109
>gb|ABA95414.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 862
Score = 490 bits (1261), Expect = e-136
Identities = 249/500 (49%), Positives = 322/500 (64%), Gaps = 2/500 (0%)
Frame = +3
Query: 6 LRLGDGDAMALQNYLKKMQVNNANFFYLMDLDEDDGKLRNVFWADGRSRAAYEEFGDAVT 185
L+LG GDA A+ Y +M + NFFY+MD+DED +L+NV W D RSRA YE F D VT
Sbjct: 186 LKLGAGDAHAVYQYFLRMTSKDPNFFYVMDVDEDS-RLKNVLWVDARSRATYESFSDVVT 244
Query: 186 FDTTYLTNKYNLPLALFVGVNHHGQSTLFGCGLILSEDVGSFTWLFKSWLASMNGRAPTA 365
FDTTYLTNKY++P A FVGVNHHG+S L GC L+ +E+ +F WLF+SWL+ M+ +AP A
Sbjct: 245 FDTTYLTNKYHMPFAPFVGVNHHGESVLLGCALLSNEETETFVWLFRSWLSCMSNKAPNA 304
Query: 366 IITDQDEAMKKAIEIVFPYTRRRWCLWHIMKKLPEKLGGCNQYDPIKDAMENAVYDSLTC 545
IITDQ AM+ AI VFP R RWCLWHIMKK+PEKLGG +Y+ I + N VYDSL
Sbjct: 305 IITDQCRAMQNAIMEVFPEARHRWCLWHIMKKIPEKLGGYLEYEVISSTLSNVVYDSLNR 364
Query: 546 EEFEGKWNSIIHNFSLQKNNWLSRLYKERNFWVPAFMKGTFWAGMSSPQRSEKLIAFFDG 725
++F+ W +I FSLQ N WL+ LY R WVPA++K TFWAGMSS QRSE + AFFDG
Sbjct: 365 DDFDKGWMKMIDEFSLQDNEWLAGLYDNRELWVPAYVKDTFWAGMSSSQRSESVNAFFDG 424
Query: 726 FVYPNTSIKQFVEQYENALRSKVQKENEEDFNSFDRWIPCITFYPLEKQFQDAYTTEIFK 905
+V T++KQFVEQY+NALR KV+KEN+ D SF IPCIT Y E+QFQ AYT + FK
Sbjct: 425 YVNARTTLKQFVEQYDNALRDKVEKENKSDCKSFQEAIPCITHYEFERQFQVAYTNKKFK 484
Query: 906 GFQNEIKGKIYCAISSIKEECGCQVYNVTEDMFGGTTRRAT-FSVCFKEGFCDIRCNCLL 1082
FQ+E++GKIY + K E ++V ED G R + V F + CD+ C C
Sbjct: 485 EFQDELRGKIYYYATLRKTEGLVHTFSVREDRKIGEQRVVSELLVLFNQEDCDLHCECRH 544
Query: 1083 FEFRGILCKHALTVLLQKQVHTLPEKFFLRRWRKDVKRHHKKIKIIYADWTVNPENERFD 1262
FEFRGILC+H L++L + +P K+ L+RWRKD KR H IK Y D P RFD
Sbjct: 545 FEFRGILCRHILSILPLVDIEKVPSKYILQRWRKDFKRKHTFIKCSYDDQLDTPIVRRFD 604
Query: 1263 KMCKAFYEVADLAAVDEDKINVVICWTKRLLNEINLNDGTRESDNCTPKVGTYVHSG-NS 1439
+CK F EVA+ +V + N+V+ L +I+ + G++E + Y +G N
Sbjct: 605 TLCKRFNEVAENGSVSDALCNLVMDGLNELQIKIDAHHGSKE-------IQEYQQNGKNK 657
Query: 1440 GPSAKESVSVGRPLAVHHKG 1499
K+ V P++V +G
Sbjct: 658 DMVLKQGKMVLSPISVRRRG 677
>gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japonica Group]
Length = 965
Score = 490 bits (1261), Expect = e-136
Identities = 249/500 (49%), Positives = 322/500 (64%), Gaps = 2/500 (0%)
Frame = +3
Query: 6 LRLGDGDAMALQNYLKKMQVNNANFFYLMDLDEDDGKLRNVFWADGRSRAAYEEFGDAVT 185
L+LG GDA A+ Y +M + NFFY+MD+DED +L+NV W D RSRA YE F D VT
Sbjct: 186 LKLGAGDAHAVYQYFLRMTSKDPNFFYVMDVDEDS-RLKNVLWVDARSRATYESFSDVVT 244
Query: 186 FDTTYLTNKYNLPLALFVGVNHHGQSTLFGCGLILSEDVGSFTWLFKSWLASMNGRAPTA 365
FDTTYLTNKY++P A FVGVNHHG+S L GC L+ +E+ +F WLF+SWL+ M+ +AP A
Sbjct: 245 FDTTYLTNKYHMPFAPFVGVNHHGESVLLGCALLSNEETETFVWLFRSWLSCMSNKAPNA 304
Query: 366 IITDQDEAMKKAIEIVFPYTRRRWCLWHIMKKLPEKLGGCNQYDPIKDAMENAVYDSLTC 545
IITDQ AM+ AI VFP R RWCLWHIMKK+PEKLGG +Y+ I + N VYDSL
Sbjct: 305 IITDQCRAMQNAIMEVFPEARHRWCLWHIMKKIPEKLGGYLEYEVISSTLSNVVYDSLNR 364
Query: 546 EEFEGKWNSIIHNFSLQKNNWLSRLYKERNFWVPAFMKGTFWAGMSSPQRSEKLIAFFDG 725
++F+ W +I FSLQ N WL+ LY R WVPA++K TFWAGMSS QRSE + AFFDG
Sbjct: 365 DDFDKGWMKMIDEFSLQDNEWLAGLYDNRELWVPAYVKDTFWAGMSSSQRSESVNAFFDG 424
Query: 726 FVYPNTSIKQFVEQYENALRSKVQKENEEDFNSFDRWIPCITFYPLEKQFQDAYTTEIFK 905
+V T++KQFVEQY+NALR KV+KEN+ D SF IPCIT Y E+QFQ AYT + FK
Sbjct: 425 YVNARTTLKQFVEQYDNALRDKVEKENKSDCKSFQEAIPCITHYEFERQFQVAYTNKKFK 484
Query: 906 GFQNEIKGKIYCAISSIKEECGCQVYNVTEDMFGGTTRRAT-FSVCFKEGFCDIRCNCLL 1082
FQ+E++GKIY + K E ++V ED G R + V F + CD+ C C
Sbjct: 485 EFQDELRGKIYYYATLRKTEGLVHTFSVREDRKIGEQRVVSELLVLFNQEDCDLHCECRH 544
Query: 1083 FEFRGILCKHALTVLLQKQVHTLPEKFFLRRWRKDVKRHHKKIKIIYADWTVNPENERFD 1262
FEFRGILC+H L++L + +P K+ L+RWRKD KR H IK Y D P RFD
Sbjct: 545 FEFRGILCRHILSILPLVDIEKVPSKYILQRWRKDFKRKHTFIKCSYDDQLDTPIVRRFD 604
Query: 1263 KMCKAFYEVADLAAVDEDKINVVICWTKRLLNEINLNDGTRESDNCTPKVGTYVHSG-NS 1439
+CK F EVA+ +V + N+V+ L +I+ + G++E + Y +G N
Sbjct: 605 TLCKRFNEVAENGSVSDALCNLVMDGLNELQIKIDAHHGSKE-------IQEYQQNGKNK 657
Query: 1440 GPSAKESVSVGRPLAVHHKG 1499
K+ V P++V +G
Sbjct: 658 DMVLKQGKMVLSPISVRRRG 677
>ref|XP_003532941.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Glycine max]
Length = 669
Score = 456 bits (1174), Expect = e-126
Identities = 229/457 (50%), Positives = 307/457 (67%), Gaps = 3/457 (0%)
Frame = +3
Query: 6 LRLGDGDAMALQNYLKKMQVNNANFFYLMDLDEDDGKLRNVFWADGRSRAAYEEFGDAVT 185
LR GDA A+Q+Y +MQ N++F+Y+MDLD DD +LRNVFWAD RS+AA E FGD VT
Sbjct: 195 LRFESGDAEAIQSYFVRMQKINSSFYYVMDLD-DDCRLRNVFWADARSKAANEYFGDVVT 253
Query: 186 FDTTYLTNKYNLPLALFVGVNHHGQSTLFGCGLILSEDVGSFTWLFKSWLASMN-GRAPT 362
FDTTYLTNKYN+PLALF+GVNHHGQS L G L+ +ED +FTWLF++WLA M+ G AP
Sbjct: 254 FDTTYLTNKYNIPLALFLGVNHHGQSVLLGIALLSNEDAETFTWLFQTWLACMSTGHAPI 313
Query: 363 AIITDQDEAMKKAIEIVFPYTRRRWCLWHIMKKLPEKLGGCNQYDPIKDAMENAVYDSLT 542
AIIT +D A+K AIEIVFP R+RWCL HIMK++ EKL G +Y+ IK + AVYDS +
Sbjct: 314 AIITREDRAIKTAIEIVFPKARQRWCLSHIMKRVSEKLRGYPRYESIKTDFDGAVYDSFS 373
Query: 543 CEEFEGKWNSIIHNFSLQKNNWLSRLYKERNFWVPAFMKGTFWAGMSSPQRSEKLIAFFD 722
++F W +I++ +L N WL+ LY ER+ WVP ++K TFWAGMS+ R+E + AFFD
Sbjct: 374 KDDFNESWKKLIYSHNLHDNEWLNSLYNERHRWVPVYVKDTFWAGMSTIDRNESVHAFFD 433
Query: 723 GFVYPNTSIKQFVEQYENALRSKVQKENEEDFNSFDRWIPCITFYPLEKQFQDAYTTEIF 902
G+V TS+KQF +Q++NA++ KV+KE DFNSF+ IPC + + +E QFQ YT F
Sbjct: 434 GYVCSKTSLKQFFKQFDNAMKDKVEKECLADFNSFNNLIPCRSHFGIEYQFQKVYTNGKF 493
Query: 903 KGFQNEIKGKIYCAISSIKEECGCQVYNVTED-MFGGTTRRATFSVCFKEGFCDIRCNCL 1079
K FQ E+ +YC + K+E Y+V E + TF+V F E +++C C
Sbjct: 494 KEFQEEVACIMYCNAAFEKKEGLVSAYSVVESKKIQEAIKYVTFNVQFNEEDFEVQCECH 553
Query: 1080 LFEFRGILCKHALTVL-LQKQVHTLPEKFFLRRWRKDVKRHHKKIKIIYADWTVNPENER 1256
LFEF+GILC+H L++L L ++ ++P K+ WRKD+KR H ++ Y D NPE ER
Sbjct: 554 LFEFKGILCRHILSLLKLIRKTESVPSKYVFSHWRKDLKRKHTLVRSSYGDLIANPEAER 613
Query: 1257 FDKMCKAFYEVADLAAVDEDKINVVICWTKRLLNEIN 1367
DKMC AF EVA + + V+ W L E++
Sbjct: 614 LDKMCNAFQEVACMGVNTDVDFKKVMKWIDDLKVELS 650
>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago truncatula]
Length = 1116
Score = 453 bits (1166), Expect = e-125
Identities = 231/456 (50%), Positives = 294/456 (64%), Gaps = 2/456 (0%)
Frame = +3
Query: 6 LRLGDGDAMALQNYLKKMQVNNANFFYLMDLDEDDGKLRNVFWADGRSRAAYEEFGDAVT 185
LRLG GDA A+QNY +MQ N+ F+Y+MD+D D +LRNVFW D R RAAYE FG+ +T
Sbjct: 515 LRLGTGDAEAIQNYFVRMQKKNSQFYYVMDVD-DKSRLRNVFWVDARCRAAYEYFGEVIT 573
Query: 186 FDTTYLTNKYNLPLALFVGVNHHGQSTLFGCGLILSEDVGSFTWLFKSWLASMNGRAPTA 365
FDTTYLTNKY++P A FVGVNHHGQS L GC L+ +ED +F+WLFK+WL M+GRAP A
Sbjct: 574 FDTTYLTNKYDMPFAPFVGVNHHGQSVLLGCALLSNEDTKTFSWLFKTWLECMHGRAPNA 633
Query: 366 IITDQDEAMKKAIEIVFPYTRRRWCLWHIMKKLPEKLGGCNQYDPIKDAMENAVYDSLTC 545
IITDQD AMKKAIE VFP R RWCLWH+MKK+PEKLG + Y+ IK + +AVYDS +
Sbjct: 634 IITDQDRAMKKAIEDVFPKARHRWCLWHLMKKVPEKLGRHSHYESIKLLLHDAVYDSSSI 693
Query: 546 EEFEGKWNSIIHNFSLQKNNWLSRLYKERNFWVPAFMKGTFWAGMSSPQRSEKLIAFFDG 725
+F KW +I + L N WL L+ ER WVP +++ TFWAGMS+ QRSE + +FFDG
Sbjct: 694 SDFMEKWKKMIECYELHDNEWLKGLFDERYRWVPVYVRDTFWAGMSTTQRSESMNSFFDG 753
Query: 726 FVYPNTSIKQFVEQYENALRSKVQKENEEDFNSFDRWIPCITFYPLEKQFQDAYTTEIFK 905
+V T++KQFVEQY+NAL+ K++KE+ DF SF+ I CI+ + E QFQ A+T FK
Sbjct: 754 YVSSKTTLKQFVEQYDNALKDKIEKESMADFVSFNTTIACISLFGFESQFQKAFTNAKFK 813
Query: 906 GFQNEIKGKIYC-AISSIKEECGCQVYNVTEDMFGGTTRRATFSVCFKEGFCDIRCNCLL 1082
FQ EI IYC A E + + F V F E +I+C C L
Sbjct: 814 EFQIEIASMIYCNAFLEGMENLNSTFCVIESKKVYDRFKDTRFRVIFNEKDFEIQCACCL 873
Query: 1083 FEFRGILCKHALTVL-LQKQVHTLPEKFFLRRWRKDVKRHHKKIKIIYADWTVNPENERF 1259
FEF+GILC+H L VL L + ++P + L RWRKD+KR H IK + N E +
Sbjct: 874 FEFKGILCRHILCVLQLTGKTESVPSCYILSRWRKDIKRRHTLIK---CGFDGNVELQLV 930
Query: 1260 DKMCKAFYEVADLAAVDEDKINVVICWTKRLLNEIN 1367
K C AFYEV + ED + V+ L E+N
Sbjct: 931 GKACDAFYEVVSVGIHTEDDLLKVMNRINELKIELN 966
>ref|XP_002461440.1| hypothetical protein SORBIDRAFT_02g002703 [Sorghum bicolor]
gi|241924817|gb|EER97961.1| hypothetical protein
SORBIDRAFT_02g002703 [Sorghum bicolor]
Length = 614
Score = 400 bits (1028), Expect = e-109
Identities = 205/437 (46%), Positives = 265/437 (60%), Gaps = 1/437 (0%)
Frame = +3
Query: 6 LRLGDGDAMALQNYLKKMQVNNANFFYLMDLDEDDGKLRNVFWADGRSRAAYEEFGDAVT 185
L+ D L Y +MQ N NFFY MD DE+ +LRNVFWAD RSRAAYE F D V
Sbjct: 141 LKFSAEDTHVLYQYFFRMQSKNPNFFYAMDFDENS-RLRNVFWADARSRAAYESFSDVVK 199
Query: 186 FDTTYLTNKYNLPLALFVGVNHHGQSTLFGCGLILSEDVGSFTWLFKSWLASMNGRAPTA 365
FD YLT+KY +PLA FVGVNHHG+ L GCGL+ +++ SF WLFKS LA M+ + P
Sbjct: 200 FDAAYLTSKYEVPLASFVGVNHHGEPILLGCGLLSNQNTESFVWLFKSLLACMSYKPPKG 259
Query: 366 IITDQDEAMKKAIEIVFPYTRRRWCLWHIMKKLPEKLGGCNQYDPIKDAMENAVYDSLTC 545
+ITDQ + ++ A+E VFP T WCL +MKKLPEKL G ++ + N VY+SLT
Sbjct: 260 LITDQCDEVQDAVEQVFPQTYHSWCLLSVMKKLPEKLRGFSKLKDFRFIFSNVVYESLTK 319
Query: 546 EEFEGKWNSIIHNFSLQKNNWLSRLYKERNFWVPAFMKGTFWAGMSSPQRSEKLIAFFDG 725
EFE W + F LQ N WL +L W PA++K TFWAGM+ + E A FDG
Sbjct: 320 CEFEKGWLEMTSKFGLQGNYWLIQLCINWQKWAPAYIKDTFWAGMAVTKECESEYALFDG 379
Query: 726 FVYPNTSIKQFVEQYENALRSKVQKENEEDFNSFDRWIPCITFYPLEKQFQDAYTTEIFK 905
+V T I QF+EQY ALR V+KE DF S CIT Y +EKQFQ YT + F+
Sbjct: 380 YVSSGTKINQFLEQYSKALRDMVEKEKNADFKSSHEVASCITHYDIEKQFQLVYTNKKFE 439
Query: 906 GFQNEIKGKIYCAISSIKEECGCQVYNVTEDM-FGGTTRRATFSVCFKEGFCDIRCNCLL 1082
FQ ++KGKIYC +K+E +NV +D+ FSV F CD++C C
Sbjct: 440 EFQEQLKGKIYCYPKLLKQEGTSYTFNVAQDVKIREQQLTLDFSVWFNGDGCDVKCACRH 499
Query: 1083 FEFRGILCKHALTVLLQKQVHTLPEKFFLRRWRKDVKRHHKKIKIIYADWTVNPENERFD 1262
FEF+GILC H ++VL +V +P K+ L+RWRKD++R + I Y + P +RFD
Sbjct: 500 FEFQGILCCHIISVLTLMKVKEVPSKYVLQRWRKDLERSYTSIACSYDENVSTPIAQRFD 559
Query: 1263 KMCKAFYEVADLAAVDE 1313
+CK+FY VA+ AA +
Sbjct: 560 VLCKSFYGVAEKAATSD 576