BLASTX nr result

ID: Coptis24_contig00003725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003725
         (1303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530842.1| dihydropyrimidinase, putative [Ricinus commu...   717   0.0  
ref|XP_002273526.2| PREDICTED: dihydropyrimidinase-like [Vitis v...   707   0.0  
ref|NP_568258.2| pyrimidine 2 [Arabidopsis thaliana] gi|28194047...   703   0.0  
ref|XP_004140190.1| PREDICTED: dihydropyrimidinase-like [Cucumis...   702   0.0  
ref|XP_002873555.1| dihydropyrimidinase [Arabidopsis lyrata subs...   701   0.0  

>ref|XP_002530842.1| dihydropyrimidinase, putative [Ricinus communis]
            gi|223529606|gb|EEF31555.1| dihydropyrimidinase, putative
            [Ricinus communis]
          Length = 503

 Score =  717 bits (1850), Expect = 0.0
 Identities = 356/432 (82%), Positives = 391/432 (90%), Gaps = 2/432 (0%)
 Frame = -2

Query: 1290 LSESNQIPEVCDVYGDFECGXXXXXXS--KLLIKGGTVVNAHHQEVADVYVENGIIVTVQ 1117
            LS SNQ  EV   YG+  CG      S  K+LIKGGTVVNAH QEVADVYVE+G+IV V+
Sbjct: 27   LSSSNQFCEVGSGYGETGCGIQSSSSSSSKILIKGGTVVNAHSQEVADVYVEDGVIVAVK 86

Query: 1116 PNIKVGDDVTVLDATGKYVMPGGIDPHTHLGMKYKNTESVDDFFNGQAAALAGGTTMHID 937
            PN+KV DDV VLDATGK+VMPGGIDPHTHL M +  T+++DDFF+GQAAALAGGTTMHID
Sbjct: 87   PNLKVSDDVIVLDATGKFVMPGGIDPHTHLAMDFMGTQTIDDFFSGQAAALAGGTTMHID 146

Query: 936  FVIPVNGSLSAGFEGYTKKAERSCMDYGFHMAITKWDEVVARDMEIMVREKGINSFKFFL 757
            FVIPVNGSL AG+E Y KKA++SCMDYGFHMAITKWDEV++R+MEIMV+EKGINSFKFFL
Sbjct: 147  FVIPVNGSLMAGYEAYEKKAKKSCMDYGFHMAITKWDEVISREMEIMVKEKGINSFKFFL 206

Query: 756  AYKGIVMVSDELLLQGFKKCKSLGALAMVHAENGDAVAEGQIRMIDLGITGPEGHALSRP 577
            AYKG +M++DELLL+GFK+CKSLGALAMVHAENGDAV EGQ RMI+LGITGPEGHALSRP
Sbjct: 207  AYKGSLMINDELLLEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRP 266

Query: 576  PVLEGEATSRVIRLAAFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPIVSGLVLDDS 397
            PVLEGEAT+R IRLA+FVNTPLYVVHVMSIDAMEEIA+ARKSGQRVIGEP+VSGLVLDDS
Sbjct: 267  PVLEGEATARAIRLASFVNTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDS 326

Query: 396  WLWNNDFTTAAKYVMSPPIRKLGHGKALQAALSTGILQLVGTDHCTYNSTQKALGIDDFR 217
             LW+ DFTTA+KYVMSPPIR  GH KALQAALSTGILQLVGTDHC +NSTQKA GIDDFR
Sbjct: 327  KLWDPDFTTASKYVMSPPIRSSGHDKALQAALSTGILQLVGTDHCVFNSTQKAFGIDDFR 386

Query: 216  KIPNGVNGIEERMHLIWDTMVESGQISVTKFVQVTSTECAQIFNIYPRKGAIFAGSDADI 37
            KIPNGVNGIEERMHL+WDTMVESGQISVT FV+VTSTECA+IFNIYPRKGAI AGSDADI
Sbjct: 387  KIPNGVNGIEERMHLVWDTMVESGQISVTDFVRVTSTECARIFNIYPRKGAILAGSDADI 446

Query: 36   IIFNPNSSFEIS 1
            II NPNSSFEIS
Sbjct: 447  IILNPNSSFEIS 458


>ref|XP_002273526.2| PREDICTED: dihydropyrimidinase-like [Vitis vinifera]
            gi|296083879|emb|CBI24267.3| unnamed protein product
            [Vitis vinifera]
          Length = 536

 Score =  707 bits (1826), Expect = 0.0
 Identities = 349/431 (80%), Positives = 388/431 (90%)
 Frame = -2

Query: 1293 QLSESNQIPEVCDVYGDFECGXXXXXXSKLLIKGGTVVNAHHQEVADVYVENGIIVTVQP 1114
            ++S+S++  +    +GD  C       SKLLIKGGTVVNAHHQE+ADVYVE+GIIV V+P
Sbjct: 24   RISKSSEFCDAGTGFGDSGCVVSSKSASKLLIKGGTVVNAHHQEIADVYVEDGIIVAVKP 83

Query: 1113 NIKVGDDVTVLDATGKYVMPGGIDPHTHLGMKYKNTESVDDFFNGQAAALAGGTTMHIDF 934
            NIKVGDDVTVLDATGK+VMPGGIDPHTHL M++  TE++DDFF+GQAAALAGGTTMHIDF
Sbjct: 84   NIKVGDDVTVLDATGKFVMPGGIDPHTHLAMEFMGTETIDDFFSGQAAALAGGTTMHIDF 143

Query: 933  VIPVNGSLSAGFEGYTKKAERSCMDYGFHMAITKWDEVVARDMEIMVREKGINSFKFFLA 754
            VIPV GSLS G E Y  KA++SCMDYGFHMAITKWDE V+R+MEIMV+EKGINSFKFFLA
Sbjct: 144  VIPVKGSLSKGLEAYKDKAKKSCMDYGFHMAITKWDENVSREMEIMVKEKGINSFKFFLA 203

Query: 753  YKGIVMVSDELLLQGFKKCKSLGALAMVHAENGDAVAEGQIRMIDLGITGPEGHALSRPP 574
            YKG +M++DELLL+G KKCKSLGALAMVHAENGDAV EGQ RMI+LGITGPEGHALSRPP
Sbjct: 204  YKGALMINDELLLEGLKKCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPP 263

Query: 573  VLEGEATSRVIRLAAFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPIVSGLVLDDSW 394
            VLEGEAT+R IRLA+FVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEP+VSGLVLDDS 
Sbjct: 264  VLEGEATARAIRLASFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPVVSGLVLDDSG 323

Query: 393  LWNNDFTTAAKYVMSPPIRKLGHGKALQAALSTGILQLVGTDHCTYNSTQKALGIDDFRK 214
            LW+ DF  AAKYVMSPPIR LGH KALQAALSTG LQLVGTDHC +NSTQKA GIDDFRK
Sbjct: 324  LWDPDFINAAKYVMSPPIRALGHDKALQAALSTGNLQLVGTDHCAFNSTQKAFGIDDFRK 383

Query: 213  IPNGVNGIEERMHLIWDTMVESGQISVTKFVQVTSTECAQIFNIYPRKGAIFAGSDADII 34
            IPNGVNGIEERMHL+WDTMVESGQISVT +V++TSTECA+IFN+YPRKGAI AGSDADII
Sbjct: 384  IPNGVNGIEERMHLVWDTMVESGQISVTDYVRITSTECARIFNMYPRKGAILAGSDADII 443

Query: 33   IFNPNSSFEIS 1
            I NPNSSF+I+
Sbjct: 444  ILNPNSSFQIT 454


>ref|NP_568258.2| pyrimidine 2 [Arabidopsis thaliana]
            gi|28194047|gb|AAO33381.1|AF465755_1 dihydropyrimidine
            amidohydrolase [Arabidopsis thaliana]
            gi|9759387|dbj|BAB10038.1| dihydropyrimidinase
            [Arabidopsis thaliana] gi|332004390|gb|AED91773.1|
            pyrimidine 2 [Arabidopsis thaliana]
          Length = 531

 Score =  703 bits (1814), Expect = 0.0
 Identities = 339/429 (79%), Positives = 384/429 (89%)
 Frame = -2

Query: 1287 SESNQIPEVCDVYGDFECGXXXXXXSKLLIKGGTVVNAHHQEVADVYVENGIIVTVQPNI 1108
            S S    + C    +   G      +++LIKGGTVVNAHHQE+ADVYVENGIIV VQPNI
Sbjct: 20   SASESTTQFCSAGRENGVGSCGVSSTRILIKGGTVVNAHHQELADVYVENGIIVAVQPNI 79

Query: 1107 KVGDDVTVLDATGKYVMPGGIDPHTHLGMKYKNTESVDDFFNGQAAALAGGTTMHIDFVI 928
            KVGD+VTVLDATGK+VMPGGIDPHTHL M++  TE++DDFF+GQAAALAGGTTMHIDFVI
Sbjct: 80   KVGDEVTVLDATGKFVMPGGIDPHTHLAMEFMGTETIDDFFSGQAAALAGGTTMHIDFVI 139

Query: 927  PVNGSLSAGFEGYTKKAERSCMDYGFHMAITKWDEVVARDMEIMVREKGINSFKFFLAYK 748
            PVNG+L AGFE Y  K+  SCMDYGFHMAITKWDE V+RDME++V+EKGINSFKFFLAYK
Sbjct: 140  PVNGNLVAGFEAYENKSRESCMDYGFHMAITKWDEGVSRDMEMLVKEKGINSFKFFLAYK 199

Query: 747  GIVMVSDELLLQGFKKCKSLGALAMVHAENGDAVAEGQIRMIDLGITGPEGHALSRPPVL 568
            G +MV+D+LLL+G K+CKSLGALAMVHAENGDAV EGQ RMI+LGITGPEGHALSRPPVL
Sbjct: 200  GSLMVTDDLLLEGLKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVL 259

Query: 567  EGEATSRVIRLAAFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPIVSGLVLDDSWLW 388
            EGEAT+R IRLA F+NTPLYVVHVMS+DAM+EIAKARKSGQ+VIGEP+VSGL+LDD WLW
Sbjct: 260  EGEATARAIRLARFINTPLYVVHVMSVDAMDEIAKARKSGQKVIGEPVVSGLILDDHWLW 319

Query: 387  NNDFTTAAKYVMSPPIRKLGHGKALQAALSTGILQLVGTDHCTYNSTQKALGIDDFRKIP 208
            + DFT A+KYVMSPPIR +GHGKALQ ALSTGILQLVGTDHCT+NSTQKALG+DDFR+IP
Sbjct: 320  DPDFTIASKYVMSPPIRPVGHGKALQDALSTGILQLVGTDHCTFNSTQKALGLDDFRRIP 379

Query: 207  NGVNGIEERMHLIWDTMVESGQISVTKFVQVTSTECAQIFNIYPRKGAIFAGSDADIIIF 28
            NGVNG+EERMHLIWDTMVESGQ+S T +V++TSTECA+IFNIYPRKGAI AGSDADIII 
Sbjct: 380  NGVNGLEERMHLIWDTMVESGQLSATDYVRITSTECARIFNIYPRKGAILAGSDADIIIL 439

Query: 27   NPNSSFEIS 1
            NPNSS+EIS
Sbjct: 440  NPNSSYEIS 448


>ref|XP_004140190.1| PREDICTED: dihydropyrimidinase-like [Cucumis sativus]
            gi|449480993|ref|XP_004156050.1| PREDICTED:
            dihydropyrimidinase-like [Cucumis sativus]
          Length = 528

 Score =  702 bits (1811), Expect = 0.0
 Identities = 344/403 (85%), Positives = 376/403 (93%)
 Frame = -2

Query: 1209 KLLIKGGTVVNAHHQEVADVYVENGIIVTVQPNIKVGDDVTVLDATGKYVMPGGIDPHTH 1030
            KLLIKGGTVVNAHHQEVADVYVE+GIIV V+ NIKVGDDV V+DATGKYVMPGGIDPHTH
Sbjct: 44   KLLIKGGTVVNAHHQEVADVYVEDGIIVAVKRNIKVGDDVAVVDATGKYVMPGGIDPHTH 103

Query: 1029 LGMKYKNTESVDDFFNGQAAALAGGTTMHIDFVIPVNGSLSAGFEGYTKKAERSCMDYGF 850
            L  ++  TE+VDDFF GQAAALAGGTTMHIDFVIPVNGSLSAGFE Y KKA++SCMDYGF
Sbjct: 104  LAFEFMGTETVDDFFTGQAAALAGGTTMHIDFVIPVNGSLSAGFESYVKKAKKSCMDYGF 163

Query: 849  HMAITKWDEVVARDMEIMVREKGINSFKFFLAYKGIVMVSDELLLQGFKKCKSLGALAMV 670
            HMAITKWDEVVA++MEIMV+EKGINSFKFFLAYKG +M+SDELLLQG KKCKSLGALAMV
Sbjct: 164  HMAITKWDEVVAQEMEIMVKEKGINSFKFFLAYKGALMISDELLLQGLKKCKSLGALAMV 223

Query: 669  HAENGDAVAEGQIRMIDLGITGPEGHALSRPPVLEGEATSRVIRLAAFVNTPLYVVHVMS 490
            HAENGDAV EGQ RMI+LGITGPEGHALSRP VLEGEATSR IRLA+FVNTPLYVVHVMS
Sbjct: 224  HAENGDAVFEGQERMIELGITGPEGHALSRPAVLEGEATSRAIRLASFVNTPLYVVHVMS 283

Query: 489  IDAMEEIAKARKSGQRVIGEPIVSGLVLDDSWLWNNDFTTAAKYVMSPPIRKLGHGKALQ 310
            IDAMEEIAKARK+GQ+VIGEP+VSGLVLD+S LW+ DF TAAKYVMSPPIR  GH KALQ
Sbjct: 284  IDAMEEIAKARKAGQKVIGEPVVSGLVLDESGLWDPDFVTAAKYVMSPPIRSSGHDKALQ 343

Query: 309  AALSTGILQLVGTDHCTYNSTQKALGIDDFRKIPNGVNGIEERMHLIWDTMVESGQISVT 130
            AALSTG+LQLVGTDHC +NSTQK++GIDDFRKIPNGVNGIEERMHL+W+TMVESGQISV 
Sbjct: 344  AALSTGVLQLVGTDHCVFNSTQKSIGIDDFRKIPNGVNGIEERMHLVWNTMVESGQISVR 403

Query: 129  KFVQVTSTECAQIFNIYPRKGAIFAGSDADIIIFNPNSSFEIS 1
             +V++TSTECA+IFNIYP+KGAI AGSDADIII NPN+SFEIS
Sbjct: 404  DYVRITSTECARIFNIYPKKGAILAGSDADIIILNPNASFEIS 446


>ref|XP_002873555.1| dihydropyrimidinase [Arabidopsis lyrata subsp. lyrata]
            gi|297319392|gb|EFH49814.1| dihydropyrimidinase
            [Arabidopsis lyrata subsp. lyrata]
          Length = 531

 Score =  701 bits (1808), Expect = 0.0
 Identities = 339/429 (79%), Positives = 384/429 (89%)
 Frame = -2

Query: 1287 SESNQIPEVCDVYGDFECGXXXXXXSKLLIKGGTVVNAHHQEVADVYVENGIIVTVQPNI 1108
            S S+   + C   G++  G      +++LIKGG VVNAHHQE+ADVYVE+GIIV VQPNI
Sbjct: 20   SVSDSTTQFCSAGGEYGVGSCGVSSTRILIKGGIVVNAHHQELADVYVEDGIIVAVQPNI 79

Query: 1107 KVGDDVTVLDATGKYVMPGGIDPHTHLGMKYKNTESVDDFFNGQAAALAGGTTMHIDFVI 928
            KVGD+VTVLDATGK+VMPGGIDPHTHL M++  TE++DDFF+GQAAALAGGTTMHIDFVI
Sbjct: 80   KVGDEVTVLDATGKFVMPGGIDPHTHLAMEFMGTETIDDFFSGQAAALAGGTTMHIDFVI 139

Query: 927  PVNGSLSAGFEGYTKKAERSCMDYGFHMAITKWDEVVARDMEIMVREKGINSFKFFLAYK 748
            P+NG+L AGFE Y  K+  SCMDYGFHMAITKWDE V+RDMEI+V+EKGINSFKFFLAYK
Sbjct: 140  PINGNLVAGFEAYENKSRESCMDYGFHMAITKWDEGVSRDMEILVKEKGINSFKFFLAYK 199

Query: 747  GIVMVSDELLLQGFKKCKSLGALAMVHAENGDAVAEGQIRMIDLGITGPEGHALSRPPVL 568
            G +MV+D+LLL+G K+CKSLGALAMVHAENGDAV EGQ RMI+LGITGPEGHALSRPPVL
Sbjct: 200  GSLMVTDDLLLEGLKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVL 259

Query: 567  EGEATSRVIRLAAFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPIVSGLVLDDSWLW 388
            EGEAT+R IRLA FVNTPLYVVHVMS+DAM+EIAKARKSGQ+VIGEP+VSGL+LDD WLW
Sbjct: 260  EGEATARAIRLARFVNTPLYVVHVMSVDAMDEIAKARKSGQKVIGEPVVSGLILDDHWLW 319

Query: 387  NNDFTTAAKYVMSPPIRKLGHGKALQAALSTGILQLVGTDHCTYNSTQKALGIDDFRKIP 208
            + DFT A+KYVMSPPIR +GHGKALQ ALSTGILQLVGTDHCT+NSTQKALG+DDFRKIP
Sbjct: 320  DPDFTIASKYVMSPPIRPVGHGKALQDALSTGILQLVGTDHCTFNSTQKALGLDDFRKIP 379

Query: 207  NGVNGIEERMHLIWDTMVESGQISVTKFVQVTSTECAQIFNIYPRKGAIFAGSDADIIIF 28
            NGVNG+EERMHLIWDTMV SGQIS T +V++TSTE A+IFNIYPRKGAI AGSDADIII 
Sbjct: 380  NGVNGLEERMHLIWDTMVGSGQISATDYVRITSTESARIFNIYPRKGAILAGSDADIIIL 439

Query: 27   NPNSSFEIS 1
            NPNSS+EIS
Sbjct: 440  NPNSSYEIS 448


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