BLASTX nr result

ID: Coptis24_contig00003721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003721
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|222850807|gb|EEE88354.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
 Frame = -3

Query: 301 SVSRLWRNVISSICIPKIT-SSPVYGLLFNTRRI-FSDPQIEKGPWSFACIHSLGEKVGL 128
           SV + W N+I+  C+PKI+ SSP++G ++  ++I F  P I+  P +             
Sbjct: 48  SVCKSWNNLITDACVPKISASSPLHGFIYLAKKIGFGKPYIDYIPCAIT-------PAVA 100

Query: 127 PNASLVESCLGRRLPFDHSPNSLLDCCNGMLLFFDRSSMQFY 2
           P            LPF+ +    LDCCNG+LLF +  ++Q+Y
Sbjct: 101 PEPHEFVKSYSSLLPFEPARGDFLDCCNGLLLFVEGCTLQYY 142


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