BLASTX nr result
ID: Coptis24_contig00003685
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00003685 (1029 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI31582.3| unnamed protein product [Vitis vinifera] 144 3e-32 ref|XP_002281465.1| PREDICTED: uncharacterized protein LOC100256... 144 3e-32 emb|CAN66597.1| hypothetical protein VITISV_030013 [Vitis vinifera] 143 6e-32 ref|XP_002316248.1| predicted protein [Populus trichocarpa] gi|2... 135 2e-29 emb|CBI30464.3| unnamed protein product [Vitis vinifera] 127 4e-27 >emb|CBI31582.3| unnamed protein product [Vitis vinifera] Length = 241 Score = 144 bits (363), Expect = 3e-32 Identities = 81/153 (52%), Positives = 97/153 (63%), Gaps = 11/153 (7%) Frame = -2 Query: 875 HGGRALAFGNGRSTRPLGLPQSAWPPLQNQ-----SQNGSGMRAVFLXXXXXXXXXXXXG 711 H R++ +GR RPLGLP SAWPPLQ+Q Q+ SGMRAVFL G Sbjct: 91 HSRRSVGLESGRCGRPLGLPPSAWPPLQHQHQHQHQQSSSGMRAVFLGGSGLKRESAGTG 150 Query: 710 VFLPRRNGVASESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQPRFVAGFHGGF--- 540 VFLPRR G AS+SRKKPGCSTVL+PARVVQALNLNF+D+G QP F G + Sbjct: 151 VFLPRRFGNASDSRKKPGCSTVLLPARVVQALNLNFEDMGS--HSQPHFNGGVAPDYEAL 208 Query: 539 ---GNSHFPQPKRSYRPQPAINTEVQLPQEWTY 450 N+ Q KR+ RP+ +N E++LPQEWTY Sbjct: 209 MARRNALISQQKRNLRPEGTMNHEIRLPQEWTY 241 >ref|XP_002281465.1| PREDICTED: uncharacterized protein LOC100256408 [Vitis vinifera] Length = 417 Score = 144 bits (363), Expect = 3e-32 Identities = 81/153 (52%), Positives = 97/153 (63%), Gaps = 11/153 (7%) Frame = -2 Query: 875 HGGRALAFGNGRSTRPLGLPQSAWPPLQNQ-----SQNGSGMRAVFLXXXXXXXXXXXXG 711 H R++ +GR RPLGLP SAWPPLQ+Q Q+ SGMRAVFL G Sbjct: 267 HSRRSVGLESGRCGRPLGLPPSAWPPLQHQHQHQHQQSSSGMRAVFLGGSGLKRESAGTG 326 Query: 710 VFLPRRNGVASESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQPRFVAGFHGGF--- 540 VFLPRR G AS+SRKKPGCSTVL+PARVVQALNLNF+D+G QP F G + Sbjct: 327 VFLPRRFGNASDSRKKPGCSTVLLPARVVQALNLNFEDMGS--HSQPHFNGGVAPDYEAL 384 Query: 539 ---GNSHFPQPKRSYRPQPAINTEVQLPQEWTY 450 N+ Q KR+ RP+ +N E++LPQEWTY Sbjct: 385 MARRNALISQQKRNLRPEGTMNHEIRLPQEWTY 417 >emb|CAN66597.1| hypothetical protein VITISV_030013 [Vitis vinifera] Length = 425 Score = 143 bits (361), Expect = 6e-32 Identities = 80/151 (52%), Positives = 96/151 (63%), Gaps = 9/151 (5%) Frame = -2 Query: 875 HGGRALAFGNGRSTRPLGLPQSAWPPLQNQ---SQNGSGMRAVFLXXXXXXXXXXXXGVF 705 H R++ +GR RPLGLP SAWPPLQ+Q Q+ SGMRAVFL GVF Sbjct: 277 HSRRSVGLESGRCGRPLGLPPSAWPPLQHQHQHQQSSSGMRAVFLGGSGLKRESAGTGVF 336 Query: 704 LPRRNGVASESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQPRFVAGFHGGF----- 540 LPRR G S+SRKKPGCSTVL+PARVVQALNLNF+D+G QP F G + Sbjct: 337 LPRRFGNXSDSRKKPGCSTVLLPARVVQALNLNFEDMGS--HSQPHFNGGVAPDYEALMA 394 Query: 539 -GNSHFPQPKRSYRPQPAINTEVQLPQEWTY 450 N+ Q KR+ RP+ +N E++LPQEWTY Sbjct: 395 RRNALISQQKRNLRPEXTMNHEIRLPQEWTY 425 >ref|XP_002316248.1| predicted protein [Populus trichocarpa] gi|222865288|gb|EEF02419.1| predicted protein [Populus trichocarpa] Length = 416 Score = 135 bits (339), Expect = 2e-29 Identities = 77/152 (50%), Positives = 93/152 (61%), Gaps = 12/152 (7%) Frame = -2 Query: 869 GRALAFGNGRSTRPLGLPQSAWPPLQ----NQSQNGSGMRAVFLXXXXXXXXXXXXGVFL 702 GR + + +GR RPLGLPQSAWPPLQ NQ N +GMRAVFL GVFL Sbjct: 265 GRDVRYEDGRCGRPLGLPQSAWPPLQVHPQNQHSNSAGMRAVFLGGSGVKRECAGTGVFL 324 Query: 701 PRRNGVASESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQPRF--VAGFHGGFG--- 537 PRR G + +KK GCSTVL+PA+VVQALNLNFDD+ QPR A FH + Sbjct: 325 PRRYGNPPDPKKKSGCSTVLLPAKVVQALNLNFDDMDISGLAQPRLNNNASFHSEYDALM 384 Query: 536 ---NSHFPQPKRSYRPQPAINTEVQLPQEWTY 450 N+ Q KR+ R + +N E++LPQEWTY Sbjct: 385 ARRNALLAQQKRNLRQENVLNREIRLPQEWTY 416 >emb|CBI30464.3| unnamed protein product [Vitis vinifera] Length = 386 Score = 127 bits (319), Expect = 4e-27 Identities = 75/156 (48%), Positives = 88/156 (56%), Gaps = 16/156 (10%) Frame = -2 Query: 869 GRALAFGNGRSTRPLGLPQSAWPPLQNQSQN------GSGMRAVFLXXXXXXXXXXXXGV 708 G++ G RS RPLGL SAWPPLQ Q Q GSGMR VFL GV Sbjct: 233 GKSNEVGINRSNRPLGLSLSAWPPLQAQQQQQQPQQGGSGMRVVFLGTHGSRKECAGTGV 292 Query: 707 FLPRRNGVASESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQPRFVAGF-------- 552 FLPRR G E RKK GCST L+PARVVQALNL DD+G Q PRF F Sbjct: 293 FLPRRVGNPPEMRKKSGCSTALLPARVVQALNLKLDDVGSQTQLHPRFNGSFAPDVDAAV 352 Query: 551 --HGGFGNSHFPQPKRSYRPQPAINTEVQLPQEWTY 450 +G + + +R++R QP +N E++LPQEWTY Sbjct: 353 KLRSSYGFA--CEQRRAFRAQPVMNHEIRLPQEWTY 386