BLASTX nr result

ID: Coptis24_contig00003685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003685
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31582.3| unnamed protein product [Vitis vinifera]              144   3e-32
ref|XP_002281465.1| PREDICTED: uncharacterized protein LOC100256...   144   3e-32
emb|CAN66597.1| hypothetical protein VITISV_030013 [Vitis vinifera]   143   6e-32
ref|XP_002316248.1| predicted protein [Populus trichocarpa] gi|2...   135   2e-29
emb|CBI30464.3| unnamed protein product [Vitis vinifera]              127   4e-27

>emb|CBI31582.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  144 bits (363), Expect = 3e-32
 Identities = 81/153 (52%), Positives = 97/153 (63%), Gaps = 11/153 (7%)
 Frame = -2

Query: 875 HGGRALAFGNGRSTRPLGLPQSAWPPLQNQ-----SQNGSGMRAVFLXXXXXXXXXXXXG 711
           H  R++   +GR  RPLGLP SAWPPLQ+Q      Q+ SGMRAVFL            G
Sbjct: 91  HSRRSVGLESGRCGRPLGLPPSAWPPLQHQHQHQHQQSSSGMRAVFLGGSGLKRESAGTG 150

Query: 710 VFLPRRNGVASESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQPRFVAGFHGGF--- 540
           VFLPRR G AS+SRKKPGCSTVL+PARVVQALNLNF+D+G     QP F  G    +   
Sbjct: 151 VFLPRRFGNASDSRKKPGCSTVLLPARVVQALNLNFEDMGS--HSQPHFNGGVAPDYEAL 208

Query: 539 ---GNSHFPQPKRSYRPQPAINTEVQLPQEWTY 450
               N+   Q KR+ RP+  +N E++LPQEWTY
Sbjct: 209 MARRNALISQQKRNLRPEGTMNHEIRLPQEWTY 241


>ref|XP_002281465.1| PREDICTED: uncharacterized protein LOC100256408 [Vitis vinifera]
          Length = 417

 Score =  144 bits (363), Expect = 3e-32
 Identities = 81/153 (52%), Positives = 97/153 (63%), Gaps = 11/153 (7%)
 Frame = -2

Query: 875 HGGRALAFGNGRSTRPLGLPQSAWPPLQNQ-----SQNGSGMRAVFLXXXXXXXXXXXXG 711
           H  R++   +GR  RPLGLP SAWPPLQ+Q      Q+ SGMRAVFL            G
Sbjct: 267 HSRRSVGLESGRCGRPLGLPPSAWPPLQHQHQHQHQQSSSGMRAVFLGGSGLKRESAGTG 326

Query: 710 VFLPRRNGVASESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQPRFVAGFHGGF--- 540
           VFLPRR G AS+SRKKPGCSTVL+PARVVQALNLNF+D+G     QP F  G    +   
Sbjct: 327 VFLPRRFGNASDSRKKPGCSTVLLPARVVQALNLNFEDMGS--HSQPHFNGGVAPDYEAL 384

Query: 539 ---GNSHFPQPKRSYRPQPAINTEVQLPQEWTY 450
               N+   Q KR+ RP+  +N E++LPQEWTY
Sbjct: 385 MARRNALISQQKRNLRPEGTMNHEIRLPQEWTY 417


>emb|CAN66597.1| hypothetical protein VITISV_030013 [Vitis vinifera]
          Length = 425

 Score =  143 bits (361), Expect = 6e-32
 Identities = 80/151 (52%), Positives = 96/151 (63%), Gaps = 9/151 (5%)
 Frame = -2

Query: 875 HGGRALAFGNGRSTRPLGLPQSAWPPLQNQ---SQNGSGMRAVFLXXXXXXXXXXXXGVF 705
           H  R++   +GR  RPLGLP SAWPPLQ+Q    Q+ SGMRAVFL            GVF
Sbjct: 277 HSRRSVGLESGRCGRPLGLPPSAWPPLQHQHQHQQSSSGMRAVFLGGSGLKRESAGTGVF 336

Query: 704 LPRRNGVASESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQPRFVAGFHGGF----- 540
           LPRR G  S+SRKKPGCSTVL+PARVVQALNLNF+D+G     QP F  G    +     
Sbjct: 337 LPRRFGNXSDSRKKPGCSTVLLPARVVQALNLNFEDMGS--HSQPHFNGGVAPDYEALMA 394

Query: 539 -GNSHFPQPKRSYRPQPAINTEVQLPQEWTY 450
             N+   Q KR+ RP+  +N E++LPQEWTY
Sbjct: 395 RRNALISQQKRNLRPEXTMNHEIRLPQEWTY 425


>ref|XP_002316248.1| predicted protein [Populus trichocarpa] gi|222865288|gb|EEF02419.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  135 bits (339), Expect = 2e-29
 Identities = 77/152 (50%), Positives = 93/152 (61%), Gaps = 12/152 (7%)
 Frame = -2

Query: 869 GRALAFGNGRSTRPLGLPQSAWPPLQ----NQSQNGSGMRAVFLXXXXXXXXXXXXGVFL 702
           GR + + +GR  RPLGLPQSAWPPLQ    NQ  N +GMRAVFL            GVFL
Sbjct: 265 GRDVRYEDGRCGRPLGLPQSAWPPLQVHPQNQHSNSAGMRAVFLGGSGVKRECAGTGVFL 324

Query: 701 PRRNGVASESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQPRF--VAGFHGGFG--- 537
           PRR G   + +KK GCSTVL+PA+VVQALNLNFDD+      QPR    A FH  +    
Sbjct: 325 PRRYGNPPDPKKKSGCSTVLLPAKVVQALNLNFDDMDISGLAQPRLNNNASFHSEYDALM 384

Query: 536 ---NSHFPQPKRSYRPQPAINTEVQLPQEWTY 450
              N+   Q KR+ R +  +N E++LPQEWTY
Sbjct: 385 ARRNALLAQQKRNLRQENVLNREIRLPQEWTY 416


>emb|CBI30464.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  127 bits (319), Expect = 4e-27
 Identities = 75/156 (48%), Positives = 88/156 (56%), Gaps = 16/156 (10%)
 Frame = -2

Query: 869 GRALAFGNGRSTRPLGLPQSAWPPLQNQSQN------GSGMRAVFLXXXXXXXXXXXXGV 708
           G++   G  RS RPLGL  SAWPPLQ Q Q       GSGMR VFL            GV
Sbjct: 233 GKSNEVGINRSNRPLGLSLSAWPPLQAQQQQQQPQQGGSGMRVVFLGTHGSRKECAGTGV 292

Query: 707 FLPRRNGVASESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQPRFVAGF-------- 552
           FLPRR G   E RKK GCST L+PARVVQALNL  DD+G   Q  PRF   F        
Sbjct: 293 FLPRRVGNPPEMRKKSGCSTALLPARVVQALNLKLDDVGSQTQLHPRFNGSFAPDVDAAV 352

Query: 551 --HGGFGNSHFPQPKRSYRPQPAINTEVQLPQEWTY 450
                +G +   + +R++R QP +N E++LPQEWTY
Sbjct: 353 KLRSSYGFA--CEQRRAFRAQPVMNHEIRLPQEWTY 386


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