BLASTX nr result

ID: Coptis24_contig00003684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003684
         (1294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517541.1| Gibberellin 20 oxidase, putative [Ricinus co...   304   3e-80
ref|XP_002280670.1| PREDICTED: gibberellin 3-beta-dioxygenase 3 ...   304   3e-80
ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis v...   304   3e-80
ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis v...   304   4e-80
emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera]   304   4e-80

>ref|XP_002517541.1| Gibberellin 20 oxidase, putative [Ricinus communis]
            gi|223543173|gb|EEF44705.1| Gibberellin 20 oxidase,
            putative [Ricinus communis]
          Length = 314

 Score =  304 bits (779), Expect = 3e-80
 Identities = 159/316 (50%), Positives = 209/316 (66%), Gaps = 4/316 (1%)
 Frame = -3

Query: 1220 MGSISSDKIPAIVFYRKDLRPGTPSWCAVRDEIRQALELYGCFEAAFGGTQ--LHPEMLG 1047
            MGS +  K+PAI F  ++L+PGT  W  V+ ++R ALE YGCFEA F      L   + G
Sbjct: 1    MGSETPLKLPAIDFSTENLKPGTVEWELVKTQVRNALEEYGCFEAFFSRVHNDLKKGVFG 60

Query: 1046 ELEKLFGLPSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 867
             +E+LF LP +TK K      F GY G Y   PL ES+  +D   +E+++SFT ++WP+G
Sbjct: 61   AIEELFELPLQTKLKNVSRKPFHGYVGQYPQAPLYESMGIEDPDTVEKVESFTSVLWPQG 120

Query: 866  NSNFCDILCSYVRQVSELELMVKRMIFESFGLERDFNATEKSTSYHLRAMRYMAPKTNEP 687
            N  F   + S+  QVS+L+ +V+RMI ES GLE+  +    ST Y LR M+Y  P+T+E 
Sbjct: 121  NLTFSKTVQSFSEQVSKLDKVVRRMIVESLGLEKYMDEHMNSTDYLLRVMKYKGPETSEA 180

Query: 686  NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 507
             LG+  HTD + +TIL QNQV GLEV+TK GEWI+VK +P S+VVMIGD+ +AW+N RLH
Sbjct: 181  KLGLHPHTDKNIVTILFQNQVDGLEVKTKNGEWITVKLSPDSFVVMIGDSLLAWANGRLH 240

Query: 506  NPIHRVMMRGDAIRYSIGLLSYAKG--ITQTPEELVDEEHPLLFKPFNHLGYHQFIVGED 333
            +P HRVMM G+  RYS GL S  K   I + PEELVDEEHPLLFKPF+H+ +  F   E 
Sbjct: 241  SPYHRVMMTGNEARYSCGLFSIPKAGYIVKAPEELVDEEHPLLFKPFDHVEFLGFYYTE- 299

Query: 332  RKGLKHASAMKAYCGV 285
              G +  SA+KAYCGV
Sbjct: 300  -AGQRAQSALKAYCGV 314


>ref|XP_002280670.1| PREDICTED: gibberellin 3-beta-dioxygenase 3 [Vitis vinifera]
            gi|297743341|emb|CBI36208.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  304 bits (779), Expect = 3e-80
 Identities = 151/314 (48%), Positives = 213/314 (67%), Gaps = 2/314 (0%)
 Frame = -3

Query: 1220 MGSISSDKIPAIVFYRKDLRPGTPSWCAVRDEIRQALELYGCFEAAFGG--TQLHPEMLG 1047
            MGS SS KIP + F +++L PG+ SW A   ++  ALE +GCF A +    ++L  ++  
Sbjct: 1    MGSHSSAKIPVVDFSKENLNPGSSSWSATCKDVLLALEEFGCFIAVYDKVPSELQNKLFS 60

Query: 1046 ELEKLFGLPSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 867
             LE+LF LP+ETK +   N  + GY G +S +PL ESI  D+   +E +QSF +LMWP G
Sbjct: 61   ALEELFNLPTETKMQNAHNKPYHGYVGQHSRLPLHESIGIDNATTLEGMQSFANLMWPAG 120

Query: 866  NSNFCDILCSYVRQVSELELMVKRMIFESFGLERDFNATEKSTSYHLRAMRYMAPKTNEP 687
            N +FC+I   + +   EL+ +V +MIFES+G+ + +++  +  SY LR +++ APK  EP
Sbjct: 121  NDHFCEITREFSKIALELDHLVTKMIFESYGVGKYYDSHLEPMSYLLRVLKHKAPKVKEP 180

Query: 686  NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 507
            NLG   HTD SF+T+L QNQV GLEV+TK GEWIS++ +PSS+ V+ GDA +AWSN RLH
Sbjct: 181  NLGFARHTDKSFITVLYQNQVKGLEVETKDGEWISLELSPSSFAVIAGDALVAWSNGRLH 240

Query: 506  NPIHRVMMRGDAIRYSIGLLSYAKGITQTPEELVDEEHPLLFKPFNHLGYHQFIVGEDRK 327
            +P H+VMM G+  RYS+GL  ++ G+ Q PEEL D+EHPL FK FNHLG  +F   E+  
Sbjct: 241  SPYHKVMMSGNEERYSLGLFQFSSGMIQIPEELGDDEHPLQFKSFNHLGLLRFFHTEE-- 298

Query: 326  GLKHASAMKAYCGV 285
            G K  S +K+YCG+
Sbjct: 299  GQKSKSLIKSYCGI 312


>ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis vinifera]
            gi|297743335|emb|CBI36202.3| unnamed protein product
            [Vitis vinifera]
          Length = 314

 Score =  304 bits (779), Expect = 3e-80
 Identities = 154/316 (48%), Positives = 209/316 (66%), Gaps = 4/316 (1%)
 Frame = -3

Query: 1220 MGSISSDKIPAIVFYRKDLRPGTPSWCAVRDEIRQALELYGCFEAAFGGT--QLHPEMLG 1047
            MGS +  K+P I F   +L+PGT  W  V+ ++++ALE YGCFEA F      L   + G
Sbjct: 1    MGSETPLKLPVIDFSDPELKPGTLQWNLVKAQVQKALEEYGCFEAFFNKVPLDLRKAIFG 60

Query: 1046 ELEKLFGLPSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 867
             LE+LF LP +TK + +    + GY G Y  +PL ES+  DD  V E+ + FT L+WPEG
Sbjct: 61   ALEELFDLPLQTKLRNSSKKPYHGYVGQYPTVPLYESMGIDDALVQEKAEHFTKLLWPEG 120

Query: 866  NSNFCDILCSYVRQVSELELMVKRMIFESFGLERDFNATEKSTSYHLRAMRYMAPKTNEP 687
            N NFC  + S+  Q+SEL+  ++RM+ ES G+E+  +    ST+Y LR M+Y  P+T E 
Sbjct: 121  NPNFCKTIQSFSEQLSELDHTIRRMVLESLGMEKYLDEHMDSTNYLLRVMKYKGPQTTET 180

Query: 686  NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 507
             LG++ HTD + +TIL QNQV GL VQTK G+WI++K +P S+++MIGD+ +AW+N RLH
Sbjct: 181  KLGLNAHTDKNIVTILYQNQVDGLGVQTKDGQWINIKCSPDSFIIMIGDSFLAWTNGRLH 240

Query: 506  NPIHRVMMRGDAIRYSIGLLSYAKG--ITQTPEELVDEEHPLLFKPFNHLGYHQFIVGED 333
            +P HRVMM G+  RYS GL S  K   + + PEELVDEEHPLLFKPF+HL + QF   E 
Sbjct: 241  SPYHRVMMTGNESRYSTGLFSIPKAGYVIKAPEELVDEEHPLLFKPFDHLEFLQFYYTE- 299

Query: 332  RKGLKHASAMKAYCGV 285
              G +  SA+K YCGV
Sbjct: 300  -AGQRAESALKTYCGV 314


>ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis vinifera]
            gi|297743336|emb|CBI36203.3| unnamed protein product
            [Vitis vinifera]
          Length = 311

 Score =  304 bits (778), Expect = 4e-80
 Identities = 153/314 (48%), Positives = 211/314 (67%), Gaps = 2/314 (0%)
 Frame = -3

Query: 1220 MGSISSDKIPAIVFYRKDLRPGTPSWCAVRDEIRQALELYGCFEAAFG--GTQLHPEMLG 1047
            MGS  + ++P + F    L+PGT SW     ++  ALE YGCF A +    ++L      
Sbjct: 1    MGS-EAPRLPVLNFSTGTLKPGTRSWLLACKDVLHALEEYGCFVAVYDKVSSELDNTTFC 59

Query: 1046 ELEKLFGLPSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 867
            +LE+LF LP+ETK K T +  + GY G +  +PL ES+  +D   ++ ++SFT++MWP G
Sbjct: 60   QLEELFDLPTETKVKNTSDKPYFGYIGQHPLIPLHESMGIEDATTLKGVESFTNIMWPAG 119

Query: 866  NSNFCDILCSYVRQVSELELMVKRMIFESFGLERDFNATEKSTSYHLRAMRYMAPKTNEP 687
            N +FC+ + SY + VSELE MVK+M+FES+  E+ +++  +ST+Y LR ++Y  P+ NE 
Sbjct: 120  NDHFCETVLSYSKLVSELEQMVKKMVFESYDAEKYYDSHIQSTTYLLRLIKYRGPQKNET 179

Query: 686  NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 507
             +G   HTD SF+T+L+QN+V GLE++TK GEWIS KP+PSSYVVM GDA +AWSN R+H
Sbjct: 180  CIGTSCHTDKSFITVLHQNEVCGLEIRTKDGEWISFKPSPSSYVVMAGDALLAWSNGRIH 239

Query: 506  NPIHRVMMRGDAIRYSIGLLSYAKGITQTPEELVDEEHPLLFKPFNHLGYHQFIVGEDRK 327
            +P HRV+M G+  RYSIGL +Y +GI + PEEL DEEHPL FKPFNH G   F      K
Sbjct: 240  SPEHRVIMNGNKARYSIGLFAYHRGIIEIPEELADEEHPLQFKPFNHYGLLHFYF--TNK 297

Query: 326  GLKHASAMKAYCGV 285
              +  S  KAYCGV
Sbjct: 298  AGQAESTAKAYCGV 311


>emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera]
          Length = 311

 Score =  304 bits (778), Expect = 4e-80
 Identities = 153/314 (48%), Positives = 211/314 (67%), Gaps = 2/314 (0%)
 Frame = -3

Query: 1220 MGSISSDKIPAIVFYRKDLRPGTPSWCAVRDEIRQALELYGCFEAAFG--GTQLHPEMLG 1047
            MGS  + ++P + F    L+PGT SW     ++  ALE YGCF A +    ++L      
Sbjct: 1    MGS-EAPRLPVLNFSTGTLKPGTRSWLLACKDVLHALEEYGCFVAVYDKVSSELDNTTFC 59

Query: 1046 ELEKLFGLPSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 867
            +LE+LF LP+ETK K T +  + GY G +  +PL ES+  +D   ++ ++SFT++MWP G
Sbjct: 60   QLEELFDLPTETKVKNTSDKPYFGYIGQHPLIPLHESMGIEDATTLKGVESFTNIMWPAG 119

Query: 866  NSNFCDILCSYVRQVSELELMVKRMIFESFGLERDFNATEKSTSYHLRAMRYMAPKTNEP 687
            N +FC+ + SY + VSELE MVK+M+FES+  E+ +++  +ST+Y LR ++Y  P+ NE 
Sbjct: 120  NDHFCETVLSYSKLVSELEQMVKKMVFESYDAEKYYDSHIQSTTYLLRLIKYRGPQKNET 179

Query: 686  NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 507
             +G   HTD SF+T+L+QN+V GLE++TK GEWIS KP+PSSYVVM GDA +AWSN R+H
Sbjct: 180  CIGTSCHTDKSFITVLHQNEVCGLEIRTKDGEWISFKPSPSSYVVMAGDALLAWSNGRIH 239

Query: 506  NPIHRVMMRGDAIRYSIGLLSYAKGITQTPEELVDEEHPLLFKPFNHLGYHQFIVGEDRK 327
            +P HRV+M G+  RYSIGL +Y +GI + PEEL DEEHPL FKPFNH G   F      K
Sbjct: 240  SPEHRVIMNGNKARYSIGLFAYHRGIIEIPEELADEEHPLQFKPFNHYGLLHFYF--TNK 297

Query: 326  GLKHASAMKAYCGV 285
              +  S  KAYCGV
Sbjct: 298  AGQTESTAKAYCGV 311


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