BLASTX nr result

ID: Coptis24_contig00003678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003678
         (1506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263464.1| PREDICTED: uncharacterized protein LOC100265...   408   e-111
emb|CAN66425.1| hypothetical protein VITISV_007985 [Vitis vinifera]   377   e-102
ref|XP_002511367.1| conserved hypothetical protein [Ricinus comm...   365   2e-98
ref|XP_002322176.1| predicted protein [Populus trichocarpa] gi|2...   362   1e-97
gb|ABK96116.1| unknown [Populus trichocarpa]                          356   1e-95

>ref|XP_002263464.1| PREDICTED: uncharacterized protein LOC100265372 [Vitis vinifera]
            gi|297733749|emb|CBI14996.3| unnamed protein product
            [Vitis vinifera]
          Length = 343

 Score =  408 bits (1048), Expect = e-111
 Identities = 208/349 (59%), Positives = 259/349 (74%), Gaps = 9/349 (2%)
 Frame = +1

Query: 115  MALIAHHTQASYASFPSRSNLQTKEVKPNKQFVSLKLVGRLDRINFSNRRY--------C 270
            MAL  HH   SYA+FP+RS+  TK +K  +   +  +VG+ D I+FS +R         C
Sbjct: 1    MALATHHVPGSYATFPTRSHSWTKGIKLKQYVKTRHIVGKPD-ISFSLKRNLHLSVGTPC 59

Query: 271  LRVQTNLPLKVKHFKVSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQ-NEETIAESPN 447
            +RV    PLK+      AFKGSA+N+ESGGR++ SK PKNSV+LSY PQ NEETI ESP 
Sbjct: 60   VRVPKRRPLKI-----CAFKGSAQNDESGGRASGSKSPKNSVRLSYAPQGNEETITESPK 114

Query: 448  TEQAPISYSSGREENIAGSPAIQKLFQKWLMMLRTQSTNQASDAIFEDEPVQSGILESHS 627
            ++  P+ YSS     I GS AIQ LF+KWL MLRTQS +Q  D I  + P    ILE+ +
Sbjct: 115  SQNVPLPYSSEANGTIGGSLAIQNLFKKWLTMLRTQSPSQEVDEILGEGPAVKEILETQN 174

Query: 628  ESEKQEGSTVLKAAWCYFLGLDTTVKILLLIFIPWYLAVNVVYGAEVSKELTPLWVLGPV 807
            E + ++   +LKA W YFLG+D  +KI LLIFIP YLAVNV YG EVSKEL PLWVLGP+
Sbjct: 175  EIQNKDRGEILKAVWFYFLGMDAVIKIPLLIFIPLYLAVNVAYGPEVSKELAPLWVLGPL 234

Query: 808  IVALYIKMLQGLCALYVFSFKQTVRLLKSSPTYFLLVYNYVAQGKLKEEFYSRFWQPVVD 987
            IVALYIKML+G+CALYVFSFKQTV+L+K+ PTY+LL Y Y+A GKLKE+  +RFWQPVVD
Sbjct: 235  IVALYIKMLRGICALYVFSFKQTVKLVKNIPTYYLLAYTYIAHGKLKEDIQARFWQPVVD 294

Query: 988  VKNLNYRKLFKRKLKALEQWAVEKYLDYVESIWPYYCRTIRFLKKANLI 1134
            +KNL+YR+L +RKLK L++W +E+YLD+VESIWPYYCRTIRFLK+ANLI
Sbjct: 295  IKNLDYRELSRRKLKDLQEWLLERYLDFVESIWPYYCRTIRFLKRANLI 343


>emb|CAN66425.1| hypothetical protein VITISV_007985 [Vitis vinifera]
          Length = 307

 Score =  377 bits (968), Expect = e-102
 Identities = 185/290 (63%), Positives = 226/290 (77%), Gaps = 1/290 (0%)
 Frame = +1

Query: 268  CLRVQTNLPLKVKHFKVSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQ-NEETIAESP 444
            C+RV    PLK+      AFKGSA+N+ESGGR++ SK PKNSV+LSY PQ NEETI ESP
Sbjct: 23   CVRVPKRRPLKI-----CAFKGSAQNDESGGRASGSKSPKNSVRLSYAPQGNEETITESP 77

Query: 445  NTEQAPISYSSGREENIAGSPAIQKLFQKWLMMLRTQSTNQASDAIFEDEPVQSGILESH 624
             ++  P+ YSS     I GS AIQ LF+KWL MLRTQS +Q  D I  + P    ILE+ 
Sbjct: 78   KSQNVPLPYSSEANGTIGGSLAIQNLFKKWLTMLRTQSPSQEVDEILGEGPAVKEILETQ 137

Query: 625  SESEKQEGSTVLKAAWCYFLGLDTTVKILLLIFIPWYLAVNVVYGAEVSKELTPLWVLGP 804
            +E + ++   +LKA W YFLG+D  +KI LLIFIP YLAVNV YG EVSKEL PLWV GP
Sbjct: 138  NEIQXKDRGEILKAVWFYFLGMDAVIKIPLLIFIPLYLAVNVAYGPEVSKELAPLWVXGP 197

Query: 805  VIVALYIKMLQGLCALYVFSFKQTVRLLKSSPTYFLLVYNYVAQGKLKEEFYSRFWQPVV 984
            +IVALYIKML+G+CALYVFSFKQTV+L+K+ PTY+LL Y Y+A GKLKE+  +RFWQPVV
Sbjct: 198  LIVALYIKMLRGICALYVFSFKQTVKLVKNIPTYYLLAYTYIAHGKLKEDIQARFWQPVV 257

Query: 985  DVKNLNYRKLFKRKLKALEQWAVEKYLDYVESIWPYYCRTIRFLKKANLI 1134
            D+KNL+YR+L +RKLK L++W +E+YLD+VESIWPYYCRTIRFLK+ANLI
Sbjct: 258  DIKNLDYRELSRRKLKDLQEWLLERYLDFVESIWPYYCRTIRFLKRANLI 307


>ref|XP_002511367.1| conserved hypothetical protein [Ricinus communis]
            gi|223550482|gb|EEF51969.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 343

 Score =  365 bits (936), Expect = 2e-98
 Identities = 186/343 (54%), Positives = 243/343 (70%), Gaps = 3/343 (0%)
 Frame = +1

Query: 115  MALIAHHTQASYASFPSRSNLQTKEVKPNKQFVSLKLVGRLDRINFSNRRYCLRVQTNLP 294
            MAL+ H  Q SY +FP R    TK  K  +   +L + GR+DR     R   L V   + 
Sbjct: 1    MALVTHQMQGSYTTFPLRPFSWTKGFKLKQHVSTLHMFGRIDRRISVKRNLRLSVGACVH 60

Query: 295  -LKVKHFKVSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQNE-ETIAESPNTEQAPIS 468
              + K FK+SAFKG+A+N+ES  R N SK+   SVKLSY  +   ETI ESP     P+S
Sbjct: 61   GPRTKFFKISAFKGTAQNDESRNRENGSKISHKSVKLSYAQKESGETIMESPKVHSVPVS 120

Query: 469  YSSGREENIAGSPAIQKLFQKWLMMLRTQSTNQASDAIF-EDEPVQSGILESHSESEKQE 645
            Y+S   E   GSPAI KLF+KWL MLRTQS NQ +D I  E  P   G  ++ + ++ +E
Sbjct: 121  YTSEANEGFNGSPAIHKLFKKWLNMLRTQSPNQVADEILGEGIPSSEGSEQTQTAAQTKE 180

Query: 646  GSTVLKAAWCYFLGLDTTVKILLLIFIPWYLAVNVVYGAEVSKELTPLWVLGPVIVALYI 825
               +LK  W +FLGLDTT+KI L++FIP YLAVNVVYG EVSKELTPLW+LGP+IVALYI
Sbjct: 181  SGEILKTVWSHFLGLDTTIKIPLMVFIPLYLAVNVVYGVEVSKELTPLWILGPLIVALYI 240

Query: 826  KMLQGLCALYVFSFKQTVRLLKSSPTYFLLVYNYVAQGKLKEEFYSRFWQPVVDVKNLNY 1005
            KML+ L ALYVFSF+QTV+L+K+ PTY+L+  +Y+ +G+LKE+ ++R  QPV+++KNL+Y
Sbjct: 241  KMLRVLWALYVFSFRQTVKLVKNLPTYYLVASSYITRGRLKEDVHARVVQPVINIKNLDY 300

Query: 1006 RKLFKRKLKALEQWAVEKYLDYVESIWPYYCRTIRFLKKANLI 1134
            ++L ++KLK  E+W ++KY DYVESIWPYYCRTIRFLK+ANLI
Sbjct: 301  KELSRKKLKEFEEWLLDKYFDYVESIWPYYCRTIRFLKRANLI 343


>ref|XP_002322176.1| predicted protein [Populus trichocarpa] gi|222869172|gb|EEF06303.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  362 bits (929), Expect = 1e-97
 Identities = 186/351 (52%), Positives = 249/351 (70%), Gaps = 11/351 (3%)
 Frame = +1

Query: 115  MALIAHHTQASYASFPSRSNLQTKEVKPNKQFVSLKLVGRLDRINFSNRRYCLRVQTNLP 294
            MAL+ H  Q SYA+FPSR    +K VK  ++   L++VGR D         C  V+ +L 
Sbjct: 1    MALVTHQMQGSYATFPSRPLSWSKGVKLKQRVTELQMVGRTDM--------CFSVKHSLR 52

Query: 295  L---------KVKHFKVSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQNE-ETIAESP 444
            L         KVK  +VSAFKGSA+N+ESGGR+N SK+ K SVKLSYVP+   ET+ +S 
Sbjct: 53   LSAGAFSHGPKVKLLRVSAFKGSAQNDESGGRANGSKVSKKSVKLSYVPKESGETMMDSS 112

Query: 445  NTEQAPISYSSGREENIAGSPAIQKLFQKWLMMLRTQSTNQASDAIFED-EPVQSGILES 621
                 P+SY+S  +E IAGSPAI KLF+KWL MLRTQS +Q +D I E+  P +  + ++
Sbjct: 113  KVHSIPVSYTSEADERIAGSPAINKLFKKWLSMLRTQSPSQVADEILEEGPPPREELQQA 172

Query: 622  HSESEKQEGSTVLKAAWCYFLGLDTTVKILLLIFIPWYLAVNVVYGAEVSKELTPLWVLG 801
             + ++ +E    +K+ W +FL LD T+KI +L FIP +LAVNVVYGA VSKELTPLW+LG
Sbjct: 173  QNTTQNKERVDNVKSVWYHFLNLDATIKIPILTFIPLFLAVNVVYGAGVSKELTPLWILG 232

Query: 802  PVIVALYIKMLQGLCALYVFSFKQTVRLLKSSPTYFLLVYNYVAQGKLKEEFYSRFWQPV 981
            P+IVA YIK+LQGL ALYVFSF+QT++++K+ PTY+L+ Y Y+ QGKLKE+  +R  QP+
Sbjct: 233  PLIVAFYIKLLQGLWALYVFSFRQTIKVIKNVPTYYLVAYGYIRQGKLKEDIQARVLQPL 292

Query: 982  VDVKNLNYRKLFKRKLKALEQWAVEKYLDYVESIWPYYCRTIRFLKKANLI 1134
               KNL+ ++  ++K+  L++W +EKYLDYVESIWPYYCR IRFLK+ANLI
Sbjct: 293  QSFKNLDRKEFSRKKMMELQEWCMEKYLDYVESIWPYYCRAIRFLKRANLI 343


>gb|ABK96116.1| unknown [Populus trichocarpa]
          Length = 342

 Score =  356 bits (913), Expect = 1e-95
 Identities = 183/343 (53%), Positives = 238/343 (69%), Gaps = 3/343 (0%)
 Frame = +1

Query: 115  MALIAHHTQASYASFPSRSNLQTKEVKPNKQFVSLKLVGRLDRINFSNRRYCLRVQTNLP 294
            MAL+ H  Q SYA+FPSR    +K VK     ++L++ GR +   FS +R  L       
Sbjct: 1    MALVTHQMQGSYATFPSRPLSWSKGVKLKPHVMTLQMFGRTNMC-FSVKRSLLLSAGAFA 59

Query: 295  L--KVKHFKVSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQNE-ETIAESPNTEQAPI 465
            L  KVK  ++SAFKGSA+N+ESGGR N SK+ KN VKLSYVP+   ETI  S      P+
Sbjct: 60   LGPKVKLLRISAFKGSAQNDESGGRKNGSKVSKNYVKLSYVPKESGETIINSSKVHTIPV 119

Query: 466  SYSSGREENIAGSPAIQKLFQKWLMMLRTQSTNQASDAIFEDEPVQSGILESHSESEKQE 645
            SY+S     IAGSPAI KLF+KWL MLRTQS +Q +D I E  P    + ++ + ++ +E
Sbjct: 120  SYTSEANNRIAGSPAINKLFKKWLSMLRTQSPSQVADEILEGPPPSEELQQAQNSTQNKE 179

Query: 646  GSTVLKAAWCYFLGLDTTVKILLLIFIPWYLAVNVVYGAEVSKELTPLWVLGPVIVALYI 825
               ++K  WC FL LD T+KI +L FIP  LA+NV+YGA VSKELTPLW+LGP+IVA+YI
Sbjct: 180  RVEIVKLVWCRFLILDATIKIPILTFIPLVLAINVIYGAGVSKELTPLWILGPLIVAIYI 239

Query: 826  KMLQGLCALYVFSFKQTVRLLKSSPTYFLLVYNYVAQGKLKEEFYSRFWQPVVDVKNLNY 1005
            K+ QGL ALYVFSF+QTV+L+K+ P Y+L+   Y+ QGKLK++      QPV+ +KNL+ 
Sbjct: 240  KLFQGLWALYVFSFRQTVKLIKNVPAYYLVASGYIRQGKLKDDMQVHVLQPVLHIKNLDR 299

Query: 1006 RKLFKRKLKALEQWAVEKYLDYVESIWPYYCRTIRFLKKANLI 1134
            ++  ++K K L++W  EKYLDYVESIWPYYCR IRFLKKANLI
Sbjct: 300  KEFSRKKTKELQEWLTEKYLDYVESIWPYYCRAIRFLKKANLI 342


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