BLASTX nr result
ID: Coptis24_contig00003667
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003667
(1433 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31848.3| unnamed protein product [Vitis vinifera] 450 0.0
ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis... 450 0.0
ref|XP_002310896.1| predicted protein [Populus trichocarpa] gi|2... 432 0.0
ref|XP_002530379.1| valyl-tRNA synthetase, putative [Ricinus com... 431 0.0
ref|XP_002306367.1| predicted protein [Populus trichocarpa] gi|2... 423 0.0
>emb|CBI31848.3| unnamed protein product [Vitis vinifera]
Length = 1106
Score = 450 bits (1158), Expect(2) = 0.0
Identities = 203/264 (76%), Positives = 237/264 (89%)
Frame = +3
Query: 3 DWCISRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQL 182
DWC+SRQLWWGHRIPAWYVTLEDD++KE GAY +HWVV RNEEEA++ A+ +F GK+FQ+
Sbjct: 552 DWCVSRQLWWGHRIPAWYVTLEDDKMKELGAYTDHWVVARNEEEAQIEASRMFPGKNFQI 611
Query: 183 AQDPDVLDTWFSSGLFPLSVLGWPDNTEELKVFYPTSVLETGHDIIFFWVARMVMLGMKL 362
+QDPDVLDTWFSSGLFPL+VLGWPD+T++LK FYPTSVLETGHDI+FFWVARMVMLG+KL
Sbjct: 612 SQDPDVLDTWFSSGLFPLTVLGWPDDTQDLKAFYPTSVLETGHDILFFWVARMVMLGIKL 671
Query: 363 GGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLEGLQKRLEEGNLDPSELV 542
GGD+PF+K+YLHPMIRDAHG+KMSKS GNV+DPLEVINGISLEGL KRLEEGNLDPSELV
Sbjct: 672 GGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPSELV 731
Query: 543 DAKREQAVEFPDGIAECGADALRFALVSYTAQSENINCNILRVIGYRQWCNKLWNVVRFA 722
AK Q +FP+GIAECGADALRFALV+YTAQS+ IN +I RV+GYRQWCNKLWN +RFA
Sbjct: 732 VAKEGQVKDFPNGIAECGADALRFALVTYTAQSDRINLDIQRVVGYRQWCNKLWNAIRFA 791
Query: 723 MTKLGDNYTPCTDMQDGIYAFQLQ 794
M+KLGD+YTP ++ + F Q
Sbjct: 792 MSKLGDDYTPPMEIVPDVMPFTCQ 815
Score = 250 bits (638), Expect(2) = 0.0
Identities = 131/220 (59%), Positives = 160/220 (72%), Gaps = 2/220 (0%)
Frame = +1
Query: 778 MPFSCRWILSVLNKGIFETVSSLDSYEFAKAANAVYSWW-FQLCDTFIEVIKPYFSRADP 954
MPF+C+WILSVLNK I +TVSS+DSYEFA AA+ VYSWW FQLCD FIEV+KP+FS DP
Sbjct: 810 MPFTCQWILSVLNKAISKTVSSMDSYEFADAASTVYSWWQFQLCDVFIEVVKPFFSSNDP 869
Query: 955 KFDSSRSAACDTLWISLDSGLRLLHPFMHFVTEELWQRLPKSSGNYSKESIMISKYPSVT 1134
KF S+R A DTLW+ LD+GLRLLHPFM FVTEELWQRLP + KESI+IS YPSV
Sbjct: 870 KFASARRFAQDTLWVCLDNGLRLLHPFMPFVTEELWQRLPPARDCARKESIVISDYPSVV 929
Query: 1135 KKWTNETTESQMDLVEGIVKMLRSRRSQLSSDVTHERWPAYAVCQIDFISEIIKNH*SEI 1314
+ WTNE E +MDLVE VK LRS RS + + HER PAY +C+ D I+EII ++ EI
Sbjct: 930 QCWTNERVEYEMDLVESTVKSLRSLRSLMPAKERHERRPAYVLCRTDAIAEIINSYELEI 989
Query: 1315 MTLAXXXXXXXEILGEYDRL-AECGSKFLNENITVYLELQ 1431
+TLA ++L E D C +NE+++VYL+LQ
Sbjct: 990 LTLA--TLSSLKVLNEGDDAPIGCAVSVVNESLSVYLKLQ 1027
>ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
Length = 1071
Score = 450 bits (1158), Expect(2) = 0.0
Identities = 203/264 (76%), Positives = 237/264 (89%)
Frame = +3
Query: 3 DWCISRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQL 182
DWC+SRQLWWGHRIPAWYVTLEDD++KE GAY +HWVV RNEEEA++ A+ +F GK+FQ+
Sbjct: 517 DWCVSRQLWWGHRIPAWYVTLEDDKMKELGAYTDHWVVARNEEEAQIEASRMFPGKNFQI 576
Query: 183 AQDPDVLDTWFSSGLFPLSVLGWPDNTEELKVFYPTSVLETGHDIIFFWVARMVMLGMKL 362
+QDPDVLDTWFSSGLFPL+VLGWPD+T++LK FYPTSVLETGHDI+FFWVARMVMLG+KL
Sbjct: 577 SQDPDVLDTWFSSGLFPLTVLGWPDDTQDLKAFYPTSVLETGHDILFFWVARMVMLGIKL 636
Query: 363 GGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLEGLQKRLEEGNLDPSELV 542
GGD+PF+K+YLHPMIRDAHG+KMSKS GNV+DPLEVINGISLEGL KRLEEGNLDPSELV
Sbjct: 637 GGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPSELV 696
Query: 543 DAKREQAVEFPDGIAECGADALRFALVSYTAQSENINCNILRVIGYRQWCNKLWNVVRFA 722
AK Q +FP+GIAECGADALRFALV+YTAQS+ IN +I RV+GYRQWCNKLWN +RFA
Sbjct: 697 VAKEGQVKDFPNGIAECGADALRFALVTYTAQSDRINLDIQRVVGYRQWCNKLWNAIRFA 756
Query: 723 MTKLGDNYTPCTDMQDGIYAFQLQ 794
M+KLGD+YTP ++ + F Q
Sbjct: 757 MSKLGDDYTPPMEIVPDVMPFTCQ 780
Score = 250 bits (638), Expect(2) = 0.0
Identities = 131/220 (59%), Positives = 160/220 (72%), Gaps = 2/220 (0%)
Frame = +1
Query: 778 MPFSCRWILSVLNKGIFETVSSLDSYEFAKAANAVYSWW-FQLCDTFIEVIKPYFSRADP 954
MPF+C+WILSVLNK I +TVSS+DSYEFA AA+ VYSWW FQLCD FIEV+KP+FS DP
Sbjct: 775 MPFTCQWILSVLNKAISKTVSSMDSYEFADAASTVYSWWQFQLCDVFIEVVKPFFSSNDP 834
Query: 955 KFDSSRSAACDTLWISLDSGLRLLHPFMHFVTEELWQRLPKSSGNYSKESIMISKYPSVT 1134
KF S+R A DTLW+ LD+GLRLLHPFM FVTEELWQRLP + KESI+IS YPSV
Sbjct: 835 KFASARRFAQDTLWVCLDNGLRLLHPFMPFVTEELWQRLPPARDCARKESIVISDYPSVV 894
Query: 1135 KKWTNETTESQMDLVEGIVKMLRSRRSQLSSDVTHERWPAYAVCQIDFISEIIKNH*SEI 1314
+ WTNE E +MDLVE VK LRS RS + + HER PAY +C+ D I+EII ++ EI
Sbjct: 895 QCWTNERVEYEMDLVESTVKSLRSLRSLMPAKERHERRPAYVLCRTDAIAEIINSYELEI 954
Query: 1315 MTLAXXXXXXXEILGEYDRL-AECGSKFLNENITVYLELQ 1431
+TLA ++L E D C +NE+++VYL+LQ
Sbjct: 955 LTLA--TLSSLKVLNEGDDAPIGCAVSVVNESLSVYLKLQ 992
>ref|XP_002310896.1| predicted protein [Populus trichocarpa] gi|222853799|gb|EEE91346.1|
predicted protein [Populus trichocarpa]
Length = 1054
Score = 432 bits (1112), Expect(2) = 0.0
Identities = 197/250 (78%), Positives = 224/250 (89%)
Frame = +3
Query: 3 DWCISRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQL 182
DWCISRQLWWGHRIPAWYVTL+DD++KE G+Y++HWVV RNEE+A A+ F GK FQ+
Sbjct: 502 DWCISRQLWWGHRIPAWYVTLDDDEMKEIGSYHDHWVVARNEEDALAEASQKFSGKKFQM 561
Query: 183 AQDPDVLDTWFSSGLFPLSVLGWPDNTEELKVFYPTSVLETGHDIIFFWVARMVMLGMKL 362
QDPDVLDTWFSSGLFPLSVLGWPD+T++L+ FYPTSVLETGHDI+FFWVARMVMLG+KL
Sbjct: 562 IQDPDVLDTWFSSGLFPLSVLGWPDDTDDLRAFYPTSVLETGHDILFFWVARMVMLGIKL 621
Query: 363 GGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLEGLQKRLEEGNLDPSELV 542
GGD+PF+K+YLHPMIRDAHG+KMSKS GNVVDPLEVING+SLEGL KRLEEGNLDP EL
Sbjct: 622 GGDVPFRKVYLHPMIRDAHGRKMSKSLGNVVDPLEVINGVSLEGLHKRLEEGNLDPKELD 681
Query: 543 DAKREQAVEFPDGIAECGADALRFALVSYTAQSENINCNILRVIGYRQWCNKLWNVVRFA 722
AK Q +FP+GIAECGADALRFALV YTAQS+ IN +ILRV+GYRQWCNKLWN VRFA
Sbjct: 682 VAKAGQKQDFPNGIAECGADALRFALVCYTAQSDKINLDILRVVGYRQWCNKLWNAVRFA 741
Query: 723 MTKLGDNYTP 752
M+KL +YTP
Sbjct: 742 MSKLDTDYTP 751
Score = 237 bits (604), Expect(2) = 0.0
Identities = 123/223 (55%), Positives = 158/223 (70%), Gaps = 2/223 (0%)
Frame = +1
Query: 769 MESMPFSCRWILSVLNKGIFETVSSLDSYEFAKAANAVYSWW-FQLCDTFIEVIKPYFSR 945
+E+MP SC+WILSVLNK IF+TVS+++SYEF+ AA+ VYSWW +Q CD FIE IKPYFS
Sbjct: 757 LEAMPSSCKWILSVLNKAIFKTVSAMNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFSG 816
Query: 946 ADPKFDSSRSAACDTLWISLDSGLRLLHPFMHFVTEELWQRLPKSSGNYSKESIMISKYP 1125
P F + RS+A DTLW+ LD+GLRLLHP M FVTEELWQRLP + G+ KESIMIS+YP
Sbjct: 817 DGPSFAAERSSAQDTLWVCLDNGLRLLHPLMPFVTEELWQRLPPARGHTRKESIMISEYP 876
Query: 1126 SVTKKWTNETTESQMDLVEGIVKMLRSRRSQLSSDVTHERWPAYAVCQIDFISEIIKNH* 1305
V W NE E +MDLVE VK LRS R+++ +ER PA+A C + IS++IK++
Sbjct: 877 KVEDAWKNEEVEYEMDLVESTVKCLRSLRAKVLGKQKNERLPAFAFCLNEDISKVIKSYQ 936
Query: 1306 SEIMTLAXXXXXXXEILGEYDR-LAECGSKFLNENITVYLELQ 1431
EI+TLA +L E D A C + +NEN+ VYL+ +
Sbjct: 937 LEILTLATLSTMKV-LLSEKDAPPAGCAFENVNENLAVYLQAE 978
>ref|XP_002530379.1| valyl-tRNA synthetase, putative [Ricinus communis]
gi|223530096|gb|EEF32012.1| valyl-tRNA synthetase,
putative [Ricinus communis]
Length = 1065
Score = 431 bits (1108), Expect(2) = 0.0
Identities = 197/250 (78%), Positives = 226/250 (90%)
Frame = +3
Query: 3 DWCISRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQL 182
DWCISRQLWWGHRIPAWY+TLEDD+LKEFG YN+HWVVGR+E+EA A+ F GK F++
Sbjct: 512 DWCISRQLWWGHRIPAWYITLEDDELKEFGVYNDHWVVGRDEKEALEEASLKFAGKKFEM 571
Query: 183 AQDPDVLDTWFSSGLFPLSVLGWPDNTEELKVFYPTSVLETGHDIIFFWVARMVMLGMKL 362
+QDPDVLDTWFSSGLFPLSVLGWPD+T++LK FYPTSVLETGHDI+FFWVARMVMLG+ L
Sbjct: 572 SQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKTFYPTSVLETGHDILFFWVARMVMLGITL 631
Query: 363 GGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLEGLQKRLEEGNLDPSELV 542
GD+PF+K+YLHPMIRDAHG+KMSKS GNV+DPLEVINGI+LEGL KRLEEGNLDP+ELV
Sbjct: 632 RGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGINLEGLHKRLEEGNLDPNELV 691
Query: 543 DAKREQAVEFPDGIAECGADALRFALVSYTAQSENINCNILRVIGYRQWCNKLWNVVRFA 722
AK Q +FP+GIAECGADALRFALVSYTAQS+ IN +I RV+GYRQWCNKLWN VRFA
Sbjct: 692 TAKDGQKKDFPNGIAECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFA 751
Query: 723 MTKLGDNYTP 752
M+KL +Y+P
Sbjct: 752 MSKLDADYSP 761
Score = 233 bits (594), Expect(2) = 0.0
Identities = 116/221 (52%), Positives = 154/221 (69%), Gaps = 1/221 (0%)
Frame = +1
Query: 772 ESMPFSCRWILSVLNKGIFETVSSLDSYEFAKAANAVYSWW-FQLCDTFIEVIKPYFSRA 948
E++PFSC+WILS LNK I TVS+++SYEF+ AA+ VYSWW +Q CD FIE IKPYF
Sbjct: 768 EALPFSCKWILSALNKAIARTVSAMNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFVGD 827
Query: 949 DPKFDSSRSAACDTLWISLDSGLRLLHPFMHFVTEELWQRLPKSSGNYSKESIMISKYPS 1128
+P++ S+++AA TLW+ LD+GLRLLHPFM FVTEELWQRLP + + K+SIMIS+YPS
Sbjct: 828 NPEYASAKNAAQGTLWVCLDNGLRLLHPFMPFVTEELWQRLPSARDHTRKDSIMISEYPS 887
Query: 1129 VTKKWTNETTESQMDLVEGIVKMLRSRRSQLSSDVTHERWPAYAVCQIDFISEIIKNH*S 1308
+ WTNE E +MDLVE VK +RS R ++ +ER PA+A CQ D ++ II +H
Sbjct: 888 AVEAWTNEQVEYEMDLVESTVKCVRSLRGEVLGKQKNERLPAFAFCQSDEVARIISSHEL 947
Query: 1309 EIMTLAXXXXXXXEILGEYDRLAECGSKFLNENITVYLELQ 1431
EI+TLA + + A C + +NEN+ VYL+ Q
Sbjct: 948 EILTLATLSSLEVLLSRKDAPPAGCAFENVNENLKVYLKAQ 988
>ref|XP_002306367.1| predicted protein [Populus trichocarpa] gi|222855816|gb|EEE93363.1|
predicted protein [Populus trichocarpa]
Length = 1046
Score = 423 bits (1087), Expect(2) = 0.0
Identities = 193/249 (77%), Positives = 220/249 (88%)
Frame = +3
Query: 3 DWCISRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQL 182
DWCISRQLWWGHRIPAWYVTLEDD K+FG YN+HWVVGRNEEEA A+ F GK F +
Sbjct: 495 DWCISRQLWWGHRIPAWYVTLEDDAEKDFGVYNDHWVVGRNEEEALAEASQKFSGKKFDI 554
Query: 183 AQDPDVLDTWFSSGLFPLSVLGWPDNTEELKVFYPTSVLETGHDIIFFWVARMVMLGMKL 362
+QDPDVLDTWFSSGLFPLSVLGWPD+T++L+ FYPTSVLETGHDI+FFWVARMVMLG++L
Sbjct: 555 SQDPDVLDTWFSSGLFPLSVLGWPDDTDDLRTFYPTSVLETGHDILFFWVARMVMLGIQL 614
Query: 363 GGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLEGLQKRLEEGNLDPSELV 542
GGD+PF+K++LHPM+RDAHG+KMSKS GNV+DPLEVI+GISLEGL KRLEEGNLD ELV
Sbjct: 615 GGDVPFRKVFLHPMVRDAHGRKMSKSLGNVIDPLEVIDGISLEGLHKRLEEGNLDQKELV 674
Query: 543 DAKREQAVEFPDGIAECGADALRFALVSYTAQSENINCNILRVIGYRQWCNKLWNVVRFA 722
AK Q +FP+GIAECG DALRFALVSYTAQS+ IN +I RV+GYRQWCNKLWN VRFA
Sbjct: 675 VAKAGQKQDFPNGIAECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFA 734
Query: 723 MTKLGDNYT 749
M+K +YT
Sbjct: 735 MSKFDIDYT 743
Score = 239 bits (610), Expect(2) = 0.0
Identities = 122/221 (55%), Positives = 156/221 (70%), Gaps = 2/221 (0%)
Frame = +1
Query: 769 MESMPFSCRWILSVLNKGIFETVSSLDSYEFAKAANAVYSWW-FQLCDTFIEVIKPYFSR 945
+E+MPFSC+WILSVLNK I + VS+LDSYE + AA+ VYSWW +Q CD FIE IKPYF+
Sbjct: 750 LETMPFSCKWILSVLNKAISKAVSALDSYELSYAASTVYSWWQYQFCDVFIEAIKPYFAG 809
Query: 946 ADPKFDSSRSAACDTLWISLDSGLRLLHPFMHFVTEELWQRLPKSSGNYSKESIMISKYP 1125
DP F RS+A +TLWI LDSGLRLLHPFM FVTEELWQRLP G+ KESI+ S+YP
Sbjct: 810 DDPAFAFERSSAQETLWICLDSGLRLLHPFMPFVTEELWQRLPPVRGHTRKESIVTSEYP 869
Query: 1126 SVTKKWTNETTESQMDLVEGIVKMLRSRRSQLSSDVTHERWPAYAVCQIDFISEIIKNH* 1305
S WTNE E +MDL+E VK LRS R+++ D +ER PA+A C++ +++I+ +H
Sbjct: 870 SAADAWTNEEVEYEMDLIESTVKCLRSLRAEVFEDRKNERLPAFAFCKMRAVADILTSHN 929
Query: 1306 SEIMTLAXXXXXXXEIL-GEYDRLAECGSKFLNENITVYLE 1425
EI+TLA +L GE A C + +NEN+ VYL+
Sbjct: 930 FEILTLAKNLSSIQVLLSGEDAPPAGCAFENVNENLAVYLK 970