BLASTX nr result

ID: Coptis24_contig00003605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003605
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278974.1| PREDICTED: uncharacterized protein LOC100257...   146   6e-33
emb|CBI26282.3| unnamed protein product [Vitis vinifera]              143   4e-32
ref|XP_003632315.1| PREDICTED: uncharacterized protein LOC100852...   138   1e-30
ref|XP_002315761.1| predicted protein [Populus trichocarpa] gi|2...   133   6e-29
ref|XP_003535646.1| PREDICTED: non-specific lipid-transfer prote...   129   1e-27

>ref|XP_002278974.1| PREDICTED: uncharacterized protein LOC100257872 [Vitis vinifera]
          Length = 217

 Score =  146 bits (368), Expect = 6e-33
 Identities = 85/199 (42%), Positives = 109/199 (54%), Gaps = 12/199 (6%)
 Frame = +1

Query: 118 LEVLFVPAYGQGSTSCTASMVNSFAPCMNFITN--GTTTSPTPACCNSLQSLTSASTDCA 291
           L V+ +P  GQ STSC+ASM++SF PC+NF+TN  G  TSPT  CCN+L+SLTS S DC 
Sbjct: 18  LMVVIMPVQGQISTSCSASMISSFTPCINFVTNSSGNGTSPTADCCNALRSLTSTSMDCL 77

Query: 292 CLILTGNVPFQLPINRTLAVSLPRACNGSSVPLQCKALGXXXXXXXXXSFGTXXXXXXXX 471
           CLI+TG+VPFQ+PINRTLA+SLPRACN +SVP+QCKA G         + G         
Sbjct: 78  CLIVTGSVPFQMPINRTLAISLPRACNTASVPVQCKATGAPVPAPGPAALGPTLSPQATP 137

Query: 472 XXXXXXXXXXXXXXTSEP-------QTPSVRXXXXXXXXXXXXXV---RPVVPNSAAIVS 621
                         ++ P        TPS+                  RPV+  SA    
Sbjct: 138 SPTGPSPKASSVPGSTSPALAPGSDTTPSLTPDSPTVDSDAPTTTTGSRPVLTPSAGNRP 197

Query: 622 TASLPSVLLLVLGATFLNY 678
            +  PS++L VLG  F+ Y
Sbjct: 198 QSLSPSLVLFVLGIIFIMY 216


>emb|CBI26282.3| unnamed protein product [Vitis vinifera]
          Length = 195

 Score =  143 bits (361), Expect = 4e-32
 Identities = 83/194 (42%), Positives = 106/194 (54%), Gaps = 12/194 (6%)
 Frame = +1

Query: 133 VPAYGQGSTSCTASMVNSFAPCMNFITN--GTTTSPTPACCNSLQSLTSASTDCACLILT 306
           +P  GQ STSC+ASM++SF PC+NF+TN  G  TSPT  CCN+L+SLTS S DC CLI+T
Sbjct: 1   MPVQGQISTSCSASMISSFTPCINFVTNSSGNGTSPTADCCNALRSLTSTSMDCLCLIVT 60

Query: 307 GNVPFQLPINRTLAVSLPRACNGSSVPLQCKALGXXXXXXXXXSFGTXXXXXXXXXXXXX 486
           G+VPFQ+PINRTLA+SLPRACN +SVP+QCKA G         + G              
Sbjct: 61  GSVPFQMPINRTLAISLPRACNTASVPVQCKATGAPVPAPGPAALGPTLSPQATPSPTGP 120

Query: 487 XXXXXXXXXTSEP-------QTPSVRXXXXXXXXXXXXXV---RPVVPNSAAIVSTASLP 636
                    ++ P        TPS+                  RPV+  SA     +  P
Sbjct: 121 SPKASSVPGSTSPALAPGSDTTPSLTPDSPTVDSDAPTTTTGSRPVLTPSAGNRPQSLSP 180

Query: 637 SVLLLVLGATFLNY 678
           S++L VLG  F+ Y
Sbjct: 181 SLVLFVLGIIFIMY 194


>ref|XP_003632315.1| PREDICTED: uncharacterized protein LOC100852532 [Vitis vinifera]
          Length = 214

 Score =  138 bits (348), Expect = 1e-30
 Identities = 86/214 (40%), Positives = 112/214 (52%), Gaps = 10/214 (4%)
 Frame = +1

Query: 61  MEGFSFKFVAHIMILTLWVLEVLFVPAYGQGSTSCTASMVNSFAPCMNFITNGTT---TS 231
           MEG   K   H++ +   +L +  + A  Q ST CT SM++SF PC+NFIT  T+   +S
Sbjct: 1   MEGL--KAFQHMVAVYTTLLAISVISANAQISTPCTTSMISSFTPCLNFITGSTSGNGSS 58

Query: 232 PTPACCNSLQSLTSASTDCACLILTGNVPFQLPINRTLAVSLPRACNGSSVPLQCKALGX 411
           PT  CC+SL+SLTS + DCACLI+TG+VP QLPINRTLA+SLPRACN  SVP+QCKA G 
Sbjct: 59  PTAGCCSSLRSLTSTTMDCACLIITGSVPLQLPINRTLAISLPRACNMGSVPIQCKASGT 118

Query: 412 XXXXXXXXSFGTXXXXXXXXXXXXXXXXXXXXXXTSEPQ-------TPSVRXXXXXXXXX 570
                     G                          P+       +P+           
Sbjct: 119 PLPAPGPVLLGPTLPPPAAAPLSPRASKAAAATLAPAPEPETAIELSPASPPVDSETPTT 178

Query: 571 XXXXVRPVVPNSAAIVSTASLPSVLLLVLGATFL 672
               +RPV+  SA+  S  S P +LL+VLG  FL
Sbjct: 179 TTPGIRPVLTPSASNPSYISSP-LLLIVLGIMFL 211


>ref|XP_002315761.1| predicted protein [Populus trichocarpa] gi|222864801|gb|EEF01932.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  133 bits (334), Expect = 6e-29
 Identities = 61/100 (61%), Positives = 77/100 (77%), Gaps = 3/100 (3%)
 Frame = +1

Query: 118 LEVLFVPAYGQGSTSCTASMVNSFAPCMNFITNGTT---TSPTPACCNSLQSLTSASTDC 288
           L V+ +P YGQ +T+CTAS++ +F PCMNF+TN T    TSPT  CC +L++LTS   DC
Sbjct: 9   LAVMILPVYGQINTACTASVLATFTPCMNFLTNSTAANGTSPTAGCCGALKNLTSNGMDC 68

Query: 289 ACLILTGNVPFQLPINRTLAVSLPRACNGSSVPLQCKALG 408
            CLI+TG+VPF +PINRTLA+SLPRACN   VP+QCKA G
Sbjct: 69  FCLIVTGSVPFSIPINRTLAISLPRACNMPGVPVQCKATG 108


>ref|XP_003535646.1| PREDICTED: non-specific lipid-transfer protein-like protein
           At2g13820-like [Glycine max]
          Length = 227

 Score =  129 bits (323), Expect = 1e-27
 Identities = 63/113 (55%), Positives = 80/113 (70%), Gaps = 3/113 (2%)
 Frame = +1

Query: 115 VLEVLFVPAYGQGSTSCTASMVNSF-APCMNFITN--GTTTSPTPACCNSLQSLTSASTD 285
           V  V+  P+YGQ ST C AS++ +F  PCMNF+TN  G  TSPT  CC++L+SLTS   D
Sbjct: 17  VAMVMGAPSYGQISTPCNASILGTFFTPCMNFLTNSSGNGTSPTTECCSALKSLTSGGMD 76

Query: 286 CACLILTGNVPFQLPINRTLAVSLPRACNGSSVPLQCKALGXXXXXXXXXSFG 444
           C CLI+TG+VPF++P+NRTLA+SLPRACN + VP+QCKA G         S G
Sbjct: 77  CLCLIVTGSVPFRIPVNRTLAISLPRACNMAGVPVQCKASGSPLPAPGPVSLG 129


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