BLASTX nr result

ID: Coptis24_contig00003600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003600
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519105.1| PREDICTED: uncharacterized protein LOC100805...    68   3e-09
ref|XP_003535828.1| PREDICTED: uncharacterized protein LOC100798...    65   1e-08
ref|XP_002323366.1| predicted protein [Populus trichocarpa] gi|2...    60   7e-07
emb|CBI39111.3| unnamed protein product [Vitis vinifera]               59   1e-06
ref|XP_002268304.1| PREDICTED: uncharacterized protein LOC100261...    59   1e-06

>ref|XP_003519105.1| PREDICTED: uncharacterized protein LOC100805715 [Glycine max]
          Length = 662

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
 Frame = -2

Query: 778 TMGILDLKLEFVLPSLINFMSRQLLGSTCKLSRKTVTYMARGD-GKFGKASGDPIYVQIC 602
           T+  +D+KL+FV PSLINF+SRQL+G+  +L +KTV+ M   D G+F KA GDP+YV+I 
Sbjct: 247 TIANMDIKLDFVPPSLINFISRQLIGNGFRLYQKTVSSMTSHDKGEFNKALGDPLYVRIR 306

Query: 601 ERLH 590
           E L+
Sbjct: 307 EALY 310


>ref|XP_003535828.1| PREDICTED: uncharacterized protein LOC100798284 [Glycine max]
          Length = 665

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 34/64 (53%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
 Frame = -2

Query: 778 TMGILDLKLEFVLPSLINFMSRQLLGSTCKLSRKTVTYMARGD-GKFGKASGDPIYVQIC 602
           T+  +D+KL FV PSLINF+SRQL+G+  +L +KTV+ M   D G+F KA GDP+YV+I 
Sbjct: 246 TIANMDIKLNFVPPSLINFISRQLIGNGFRLYQKTVSSMMSHDKGEFSKALGDPLYVRIR 305

Query: 601 ERLH 590
           + L+
Sbjct: 306 DALY 309


>ref|XP_002323366.1| predicted protein [Populus trichocarpa] gi|222867996|gb|EEF05127.1|
           predicted protein [Populus trichocarpa]
          Length = 803

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 30/63 (47%), Positives = 44/63 (69%)
 Frame = -2

Query: 778 TMGILDLKLEFVLPSLINFMSRQLLGSTCKLSRKTVTYMARGDGKFGKASGDPIYVQICE 599
           T+  +DLKL+FV PSLINF+SRQL+G+  +L +K V  ++  D  + KA  DP+Y +I E
Sbjct: 246 TIANMDLKLDFVRPSLINFISRQLVGNGFRLYQKAVASVSNYDEDYSKALKDPMYARIRE 305

Query: 598 RLH 590
            L+
Sbjct: 306 ALY 308


>emb|CBI39111.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 30/62 (48%), Positives = 43/62 (69%)
 Frame = -2

Query: 778 TMGILDLKLEFVLPSLINFMSRQLLGSTCKLSRKTVTYMARGDGKFGKASGDPIYVQICE 599
           T+  +D+KL+FV PSLINF+SRQL+GS  +L +K V+    G+  F +A G P+Y +I E
Sbjct: 250 TIANMDIKLDFVPPSLINFISRQLVGSGFRLYQKIVSSATEGNEDFHEALGGPLYTRIRE 309

Query: 598 RL 593
            L
Sbjct: 310 AL 311


>ref|XP_002268304.1| PREDICTED: uncharacterized protein LOC100261548 [Vitis vinifera]
          Length = 613

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 30/62 (48%), Positives = 43/62 (69%)
 Frame = -2

Query: 778 TMGILDLKLEFVLPSLINFMSRQLLGSTCKLSRKTVTYMARGDGKFGKASGDPIYVQICE 599
           T+  +D+KL+FV PSLINF+SRQL+GS  +L +K V+    G+  F +A G P+Y +I E
Sbjct: 257 TIANMDIKLDFVPPSLINFISRQLVGSGFRLYQKIVSSATEGNEDFHEALGGPLYTRIRE 316

Query: 598 RL 593
            L
Sbjct: 317 AL 318


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