BLASTX nr result

ID: Coptis24_contig00003599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003599
         (1576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein A...   466   e-129
emb|CAN62385.1| hypothetical protein VITISV_011126 [Vitis vinifera]   464   e-128
ref|XP_002520111.1| homeobox protein, putative [Ricinus communis...   453   e-125
ref|XP_002311597.1| predicted protein [Populus trichocarpa] gi|2...   446   e-123
ref|XP_002315797.1| predicted protein [Populus trichocarpa] gi|2...   433   e-119

>ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein ATHB-13-like [Vitis
            vinifera]
          Length = 285

 Score =  466 bits (1199), Expect = e-129
 Identities = 236/289 (81%), Positives = 255/289 (88%), Gaps = 3/289 (1%)
 Frame = +2

Query: 302  MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLNPILPSCTPQDFHGVASFLGKRSMSFSG 481
            MTCN MAFFP+NFMLQT   +D     PP SLNPILPSC PQDFHGVAS LGKRSMSFSG
Sbjct: 1    MTCNGMAFFPANFMLQTPREDDHQ---PPNSLNPILPSCAPQDFHGVASLLGKRSMSFSG 57

Query: 482  IDVCEEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALGLQ 661
            IDVCEE NGEDDLSDDGSQ GEKKRRLNMEQV+TLEKNFELGNKLEPERKMQLARALGLQ
Sbjct: 58   IDVCEETNGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQ 117

Query: 662  PRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNREP 841
            PRQIAIWFQNRRARWKTKQLEKDYDLLKRQF+A+KA+NDALQAQN+KLHAE+LALK+REP
Sbjct: 118  PRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAVKAENDALQAQNQKLHAEMLALKSREP 177

Query: 842  TECINLN-KETEGSCSNRSENSSDINLDISRTPAIDSPLSSNP-SRPLFPSSIRSTSMVQ 1015
            TE INLN KETEGSCSNRSENSSDI LDISRTPAIDSPLS++P SRPLFPSSIR   +VQ
Sbjct: 178  TESINLNIKETEGSCSNRSENSSDIKLDISRTPAIDSPLSTHPTSRPLFPSSIRPAGVVQ 237

Query: 1016 LLQN-TTKSDLQFQKIDHNNSQEESFCNMFCSIDDQPGFWPWPEQSQFH 1159
            L QN +++ DLQ QK+D    +EESFCNMFC +DDQ GFWPW EQ  F+
Sbjct: 238  LFQNSSSRPDLQCQKMD-QPVKEESFCNMFCGMDDQSGFWPWLEQQHFN 285


>emb|CAN62385.1| hypothetical protein VITISV_011126 [Vitis vinifera]
          Length = 285

 Score =  464 bits (1193), Expect = e-128
 Identities = 235/289 (81%), Positives = 254/289 (87%), Gaps = 3/289 (1%)
 Frame = +2

Query: 302  MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLNPILPSCTPQDFHGVASFLGKRSMSFSG 481
            MTCN MAFFP+NFMLQT   +D     PP SLNPILPSC PQDFHGVAS LGKRSMSFSG
Sbjct: 1    MTCNGMAFFPANFMLQTPREDDHQ---PPNSLNPILPSCAPQDFHGVASLLGKRSMSFSG 57

Query: 482  IDVCEEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALGLQ 661
            IDVCEE NGEDDLSDDGSQ GEKKRRLNMEQV+TLEKNFELGNKLEPERKM LARALGLQ
Sbjct: 58   IDVCEETNGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMXLARALGLQ 117

Query: 662  PRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNREP 841
            PRQIAIWFQNRRARWKTKQLEKDYDLLKRQF+A+KA+NDALQAQN+KLHAE+LALK+REP
Sbjct: 118  PRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAVKAENDALQAQNQKLHAEMLALKSREP 177

Query: 842  TECINLN-KETEGSCSNRSENSSDINLDISRTPAIDSPLSSNP-SRPLFPSSIRSTSMVQ 1015
            TE INLN KETEGSCSNRSENSSDI LDISRTPAIDSPLS++P SRPLFPSSIR   +VQ
Sbjct: 178  TESINLNIKETEGSCSNRSENSSDIKLDISRTPAIDSPLSTHPTSRPLFPSSIRPAGVVQ 237

Query: 1016 LLQN-TTKSDLQFQKIDHNNSQEESFCNMFCSIDDQPGFWPWPEQSQFH 1159
            L QN +++ DLQ QK+D    +EESFCNMFC +DDQ GFWPW EQ  F+
Sbjct: 238  LFQNSSSRPDLQCQKMD-QPVKEESFCNMFCGMDDQSGFWPWLEQQHFN 285


>ref|XP_002520111.1| homeobox protein, putative [Ricinus communis]
            gi|223540603|gb|EEF42166.1| homeobox protein, putative
            [Ricinus communis]
          Length = 296

 Score =  453 bits (1166), Expect = e-125
 Identities = 237/299 (79%), Positives = 252/299 (84%), Gaps = 13/299 (4%)
 Frame = +2

Query: 302  MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLNPILPSCTPQDFHGVASFLGKRSMSFSG 481
            MTCN MAFFP+NFMLQT H ED  H  PPTSLNPILPSCT  DFHGVASFLGKRSMS SG
Sbjct: 1    MTCNGMAFFPANFMLQTPHEED--HHQPPTSLNPILPSCTTHDFHGVASFLGKRSMSCSG 58

Query: 482  IDVC--EEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALG 655
            ID    EEANGEDDLSDDGSQ GEKKRRLNMEQV+TLEKNFELGNKLEPERKMQLARALG
Sbjct: 59   IDASCHEEANGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 118

Query: 656  LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNR 835
            LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQF+AIKADNDALQAQN+KLHAEI+ALK+R
Sbjct: 119  LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNDALQAQNQKLHAEIMALKSR 178

Query: 836  EPTECINLNKETEGSCSNRSENSSDINLDISRTPAIDSPLSSNP--SRPLFP--SSIRST 1003
            EPTE INLNKETEGSCSNRSENSSDI LDISRTPAIDSPLS++P  SRPLFP  SSIR T
Sbjct: 179  EPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLSNHPITSRPLFPSSSSIRPT 238

Query: 1004 SMVQLLQNTTKS-------DLQFQKIDHNNSQEESFCNMFCSIDDQPGFWPWPEQSQFH 1159
             +  L  N++ S       ++Q QKID    +EES  NMFC IDDQ GFWPW EQ  F+
Sbjct: 239  GVAHLFHNSSSSRPDSHHHNIQCQKID-QMVKEESLSNMFCGIDDQSGFWPWLEQQHFN 296


>ref|XP_002311597.1| predicted protein [Populus trichocarpa] gi|222851417|gb|EEE88964.1|
            predicted protein [Populus trichocarpa]
          Length = 289

 Score =  446 bits (1147), Expect = e-123
 Identities = 231/292 (79%), Positives = 254/292 (86%), Gaps = 6/292 (2%)
 Frame = +2

Query: 302  MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLNPILPSCTPQDFHGVASFLGKRS-MSFS 478
            MTCN MAFFP+NFMLQ+SH  DQD   PPTSLNPILPSC P+DFHGVA FLGKRS MSFS
Sbjct: 1    MTCNGMAFFPTNFMLQSSH--DQDDHQPPTSLNPILPSCAPRDFHGVAPFLGKRSSMSFS 58

Query: 479  GIDVC-EEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALG 655
            GIDVC EE NGED+LSDDGSQ GEKKRRL+MEQV+TLEKNFELGNKLEPERKMQLARALG
Sbjct: 59   GIDVCHEEGNGEDELSDDGSQAGEKKRRLSMEQVKTLEKNFELGNKLEPERKMQLARALG 118

Query: 656  LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNR 835
            LQPRQIAIWFQNRRARWKTKQLE DYDLLKRQFDA+KA+N+ALQ QN++LHAEILALK+R
Sbjct: 119  LQPRQIAIWFQNRRARWKTKQLEIDYDLLKRQFDAVKAENNALQTQNQRLHAEILALKSR 178

Query: 836  EPTECINLNKETEGSCSNRSENSSDINLDISRTPAIDSPLSSN--PSRPLFP-SSIRSTS 1006
            EPTE INLNKETEGSCSNRSENSSDI LDISRTPAIDSPL ++   SRP FP SSIR T 
Sbjct: 179  EPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLPNHHPTSRPFFPSSSIRPTG 238

Query: 1007 MVQLLQ-NTTKSDLQFQKIDHNNSQEESFCNMFCSIDDQPGFWPWPEQSQFH 1159
            + QL Q N+++ D Q+QK+DH   +EES  NM CSI+DQ GFWPW EQ QF+
Sbjct: 239  IAQLNQNNSSRPDFQYQKMDH-IVKEESLTNMLCSIEDQSGFWPWLEQQQFN 289


>ref|XP_002315797.1| predicted protein [Populus trichocarpa] gi|222864837|gb|EEF01968.1|
            predicted protein [Populus trichocarpa]
          Length = 296

 Score =  433 bits (1113), Expect = e-119
 Identities = 233/301 (77%), Positives = 250/301 (83%), Gaps = 15/301 (4%)
 Frame = +2

Query: 302  MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLNPILPSCTPQDFHGVASFLGKRS-MSFS 478
            MTCN MAFFP+NFMLQ SH  DQD   PPTSLNPILPS  PQDFHGVASF+GKRS MSFS
Sbjct: 1    MTCNGMAFFPTNFMLQISH--DQDDHQPPTSLNPILPS--PQDFHGVASFIGKRSSMSFS 56

Query: 479  GIDVC-EEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALG 655
            GID C EE NGED+LSDDGSQ GEKKRRLNMEQV+TLEKNFELGNKLEPERKMQLARALG
Sbjct: 57   GIDACHEEGNGEDELSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 116

Query: 656  LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNR 835
            LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKA+NDALQAQN+KLHAEIL LK+R
Sbjct: 117  LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKAENDALQAQNQKLHAEILTLKSR 176

Query: 836  EPTECINLNKETEGSCSNRSENSSDINLDISRTPAIDSPLSSN--PSRPLFPSS------ 991
            EPTE INLNKETEGS SNRSENSSDI LDISRTPAIDSPLS++   SR  FPSS      
Sbjct: 177  EPTEPINLNKETEGSSSNRSENSSDIKLDISRTPAIDSPLSNHHPTSRSFFPSSSSSIRP 236

Query: 992  ----IRSTSMVQLLQ-NTTKSDLQFQKIDHNNSQEESFCNMFCSIDDQPGFWPWPEQSQF 1156
                IR T + QL Q N ++ D+Q QKID    +EE+  NMFCSI+DQ GFWPW EQ  F
Sbjct: 237  AGVAIRPTGVAQLFQTNPSRPDIQCQKID-QLVKEENLGNMFCSIEDQSGFWPWLEQQHF 295

Query: 1157 H 1159
            +
Sbjct: 296  N 296


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