BLASTX nr result

ID: Coptis24_contig00003598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003598
         (1672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN69972.1| MYB transcription factor ML2 [Thalictrum thalictr...   561   e-157
gb|ACT78693.1| mixta-like2 MYB transcription factor [Thalictrum ...   546   e-153
gb|ACT78694.1| mixta-like2 MYB transcription factor [Thalictrum ...   522   e-146
ref|XP_002283843.1| PREDICTED: uncharacterized protein LOC100245...   461   e-127
ref|XP_002323871.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126

>gb|ACN69972.1| MYB transcription factor ML2 [Thalictrum thalictroides]
          Length = 405

 Score =  561 bits (1447), Expect = e-157
 Identities = 289/403 (71%), Positives = 321/403 (79%), Gaps = 23/403 (5%)
 Frame = -3

Query: 1493 MGRSPCCDKVGLKKGPWTPEEDQKLLAHIEEHGHGSWRALPTKAGLQRCGKSCRLRWTNY 1314
            MGRSPCCDKVGLKKGPWTPEEDQKLLA+IEEHGHGSWRALP KAGLQRCGKSCRLRWTNY
Sbjct: 1    MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNY 60

Query: 1313 LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKLG 1134
            LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRL+KLG
Sbjct: 61   LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLSKLG 120

Query: 1133 IDPVTHKPKSDALSSVDGQTKSDSNLSHMAQWESARLEAEARLVRESRLRSNSFIQQLGL 954
            IDPVTHKPKSDALSS+DG TK+DSNLSHMAQWESARLEAEARLVRES+LRS+S   QLGL
Sbjct: 121  IDPVTHKPKSDALSSIDGHTKADSNLSHMAQWESARLEAEARLVRESKLRSSSLNSQLGL 180

Query: 953  SGSGTGMDQGHLHLSKGTTSSTQPHCLDILKAWQGAWSNSTKCGAVAGGGSS--GHDLES 780
            SGSG    Q    L+K T++STQP CL+++KAWQG WS  TKCG V G GSS  G DLES
Sbjct: 181  SGSGVDPGQ---QLNKATSTSTQPQCLNVMKAWQGIWSKPTKCGLVTGEGSSTGGLDLES 237

Query: 779  PTSTLCFSENSMPIANVGFSDN-HLSSVDLIHNPGT-----------XXXXXXXXXXXXX 636
            PTSTLCFS+NSMP+  VGFSDN  +SS+DLI N  +                        
Sbjct: 238  PTSTLCFSDNSMPVLTVGFSDNPTMSSLDLIPNSSSGTFEGAPVKEECDEEYMGGEYKRM 297

Query: 635  XXXXXKMQPSHNDMGF--TMETPWLAQSSKSGHDHIPVTNFIEGFTSLLLANS-DDRNSV 465
                  +     DMGF  T+++PW ++SSK G++HIPVTNFIEGFT+LLL NS +DRNSV
Sbjct: 298  VNSAVPLNTGLQDMGFSTTVDSPWSSESSKVGNEHIPVTNFIEGFTNLLLGNSINDRNSV 357

Query: 464  DH-SGDSD-----NADGTGCDEYEENKSYWNNILNLVNSSPSD 354
            D+ SGD D     +AD   C+E+EENK+YWNNILNLVNSSPSD
Sbjct: 358  DNTSGDGDSSDNGDADAMDCEEFEENKNYWNNILNLVNSSPSD 400


>gb|ACT78693.1| mixta-like2 MYB transcription factor [Thalictrum dioicum]
          Length = 392

 Score =  546 bits (1408), Expect = e-153
 Identities = 285/395 (72%), Positives = 316/395 (80%), Gaps = 19/395 (4%)
 Frame = -3

Query: 1469 KVGLKKGPWTPEEDQKLLAHIEEHGHGSWRALPTKAGLQRCGKSCRLRWTNYLRPDIKRG 1290
            KVGLKKGPWTPEEDQKLLA+IEEHGHGSWRALP+KAGLQRCGKSCRLRWTNYLRPDIKRG
Sbjct: 1    KVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYLRPDIKRG 60

Query: 1289 KFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKLGIDPVTHKP 1110
            KFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRL+KLGIDPVTHKP
Sbjct: 61   KFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLSKLGIDPVTHKP 120

Query: 1109 KSDALSSVDGQTKSDSNLSHMAQWESARLEAEARLVRESRLRSNSFIQQLGLSGSGTGMD 930
            KSDALSS++GQTK+DSNLSHMAQWESARLEAEARLVRES+LRS S   QLGLS SG    
Sbjct: 121  KSDALSSINGQTKADSNLSHMAQWESARLEAEARLVRESKLRSTSMNNQLGLSSSGVDPG 180

Query: 929  QGHLHLSKGTTSSTQPHCLDILKAWQGAWSNSTKCGAVAGGGSSGH-DLESPTSTLCFSE 753
            Q    L+K T++STQP CLD++K WQG WS  TKCG + G GS+G  DLESPTSTLCFS+
Sbjct: 181  Q---QLNKATSTSTQPQCLDVMKTWQGIWSKPTKCGLLTGEGSTGGLDLESPTSTLCFSD 237

Query: 752  NSMPIANVGFSDNHLSSVDLIHN-----PGTXXXXXXXXXXXXXXXXXXKMQPSHN---- 600
            NSMP+  VGFSDN + S+DLI N      G                   +M  S N    
Sbjct: 238  NSMPVLTVGFSDNPMPSLDLIPNSSGTSEGVPAVKEECDEEYMGGGEYKRMVNSVNTGLQ 297

Query: 599  DMGF--TMETPWLAQSSKSGHDHIPVTNFIEGFTSLLLANSDD---RNSVDH-SGD-SDN 441
            DMGF  T+++PW ++SSK G++HIPVTNFIEGFT+LLL NS     RNSVD+ SGD SDN
Sbjct: 298  DMGFSTTVDSPWASESSKGGNEHIPVTNFIEGFTNLLLGNSIHDRMRNSVDNTSGDSSDN 357

Query: 440  ADGTG--CDEYEENKSYWNNILNLVNSSPSDSPVF 342
            AD     C+E+EENK+YWNNILNLVNSSPSDSP F
Sbjct: 358  ADADAMDCEEFEENKNYWNNILNLVNSSPSDSPTF 392


>gb|ACT78694.1| mixta-like2 MYB transcription factor [Thalictrum filamentosum]
          Length = 388

 Score =  522 bits (1345), Expect = e-146
 Identities = 271/386 (70%), Positives = 304/386 (78%), Gaps = 22/386 (5%)
 Frame = -3

Query: 1445 WTPEEDQKLLAHIEEHGHGSWRALPTKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQ 1266
            WTPEEDQKLLA+IEEHGHGSWRALP KAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQ
Sbjct: 1    WTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQ 60

Query: 1265 TIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKLGIDPVTHKPKSDALSSV 1086
            TIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRL+KLGIDPVTHKPKSDALSS+
Sbjct: 61   TIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLSKLGIDPVTHKPKSDALSSI 120

Query: 1085 DGQTKSDSNLSHMAQWESARLEAEARLVRESRLRSNSFIQQLGLSGSGTGMDQGHLHLSK 906
            DG TK+DSNLSHMAQWESARLEAEARLVRES+LRS+S   QLGLSGSG    Q    L+K
Sbjct: 121  DGHTKADSNLSHMAQWESARLEAEARLVRESKLRSSSLNNQLGLSGSGVDPGQ---QLNK 177

Query: 905  GTTSSTQPHCLDILKAWQGAWSNSTKCGAVAGGGSSGH-DLESPTSTLCFSENSMPIANV 729
             T++STQP CL+++KAWQG WS  TKCG V G GS+G  DLESPTSTLCFS+NSMP+  V
Sbjct: 178  ATSTSTQPQCLNVMKAWQGIWSKPTKCGLVTGEGSTGGLDLESPTSTLCFSDNSMPVLTV 237

Query: 728  GFSDN-HLSSVDLIHNPGT-----------XXXXXXXXXXXXXXXXXXKMQPSHNDMGF- 588
            GFSDN  +SS+DLI N  +                              +     DMGF 
Sbjct: 238  GFSDNPTMSSLDLIPNSSSGTFEGAPVKEECDEEYMGGEYKRMVNSAVPLNTGLQDMGFS 297

Query: 587  -TMETPWLAQSSKSGHDHIPVTNFIEGFTSLLLANS-DDRNSVDH-SGDSDNADGTGCD- 420
             T+++PW ++SSK G++HIPVTNFIEGFT+LLL NS +DRNSVD+ SGD D++D    D 
Sbjct: 298  TTVDSPWASESSKVGNEHIPVTNFIEGFTNLLLGNSINDRNSVDNTSGDGDSSDNGDADA 357

Query: 419  ----EYEENKSYWNNILNLVNSSPSD 354
                E+EENK+YWNNILNLVNSSPSD
Sbjct: 358  MDYEEFEENKNYWNNILNLVNSSPSD 383


>ref|XP_002283843.1| PREDICTED: uncharacterized protein LOC100245564 [Vitis vinifera]
          Length = 393

 Score =  461 bits (1185), Expect = e-127
 Identities = 247/407 (60%), Positives = 283/407 (69%), Gaps = 23/407 (5%)
 Frame = -3

Query: 1493 MGRSPCCDKVGLKKGPWTPEEDQKLLAHIEEHGHGSWRALPTKAGLQRCGKSCRLRWTNY 1314
            MGRSPCCDKVGLKKGPWTPEEDQKLLA+IEEHGHGSWRALP+KAGLQRCGKSCRLRWTNY
Sbjct: 1    MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNY 60

Query: 1313 LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKLG 1134
            LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRL K+G
Sbjct: 61   LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMG 120

Query: 1133 IDPVTHKPKSDALSSVDGQTKSDSNLSHMAQWESARLEAEARLVRESRLRSNSFIQQLGL 954
            IDPVTHKPKSDAL S DGQ+K+ +NLSHMAQWESARLEAEARLVRES+LRSNSF    G 
Sbjct: 121  IDPVTHKPKSDALLSSDGQSKNAANLSHMAQWESARLEAEARLVRESKLRSNSFNHHPGT 180

Query: 953  SGSGTGMDQGHLHLSKGTTSSTQPHCLDILKAWQGAWSNSTKCGAVAGGGSSG------- 795
              + T    G         SS+ P  LD+LKAW G W  ST+ G  +GGG  G       
Sbjct: 181  PSASTSAAVGG---KTAAVSSSPPLYLDVLKAWHGVWPKSTEGGGSSGGGGGGGGGGGGV 237

Query: 794  ---HDLESPTSTLCFSENSMPIANVGFSDNHLSSVDLIHNPGT--------XXXXXXXXX 648
                DLESPTSTL +SEN+  +A+        + +D + N G+                 
Sbjct: 238  AVAGDLESPTSTLSYSENAAAVAST-------AVIDFVGNSGSCEGGIIKDEGDQQEWKG 290

Query: 647  XXXXXXXXXKMQPSHNDMGFTMET-PWLAQSSKSGHDHIPVTNFIEGFTSLLLANSDDR- 474
                         + +DM   M++  W  +S K+    +   +FIEGFT LLL+NS +R 
Sbjct: 291  MGSSTQLPESFTSALHDMAVPMDSGAWTPESLKT----VNGGHFIEGFTELLLSNSTNRT 346

Query: 473  -NSVDHSGDSDN--ADGTGCDEYEENKSYWNNILNLVNSSPSDSPVF 342
             +  D  GDSDN    G+G D YE+NK+YWN+ILNLVNSSP DSP+F
Sbjct: 347  LSDTDGGGDSDNGGCSGSGSDYYEDNKNYWNSILNLVNSSPYDSPMF 393


>ref|XP_002323871.1| predicted protein [Populus trichocarpa] gi|222866873|gb|EEF04004.1|
            predicted protein [Populus trichocarpa]
          Length = 401

 Score =  456 bits (1173), Expect = e-126
 Identities = 245/407 (60%), Positives = 288/407 (70%), Gaps = 23/407 (5%)
 Frame = -3

Query: 1493 MGRSPCCDKVGLKKGPWTPEEDQKLLAHIEEHGHGSWRALPTKAGLQRCGKSCRLRWTNY 1314
            MGRSPCCDKVGLKKGPWTPEEDQKLLA+IEEHGHGSWRALP KAGLQRCGKSCRLRWTNY
Sbjct: 1    MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNY 60

Query: 1313 LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKLG 1134
            LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRL K+G
Sbjct: 61   LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMG 120

Query: 1133 IDPVTHKPKSDALSSVDGQTKSDSNLSHMAQWESARLEAEARLVRESRLRSNSFIQQLGL 954
            IDPVTHK K+DAL S+DGQ+K+ +NLSHMAQWESARLEAEARLVRES+LRS S   QL  
Sbjct: 121  IDPVTHKSKNDALLSIDGQSKNAANLSHMAQWESARLEAEARLVRESKLRSQSIQHQLSS 180

Query: 953  SGSGTGMDQGHLHLSKGTTSST---QPHCLDILKAWQGAWSNSTKCGAVAGGGSS---GH 792
            +  G     G    S G+TSST    P  LD LKAW   WS S++     GGG +   G 
Sbjct: 181  TTPGYFPGSGS---SPGSTSSTLAQPPRSLDALKAWNDGWSKSSEGN---GGGLNMGIGD 234

Query: 791  DLESPTSTLCFSENSMPIANVG-FSDNHLSSVDLIHNPGT----------XXXXXXXXXX 645
             LESPTSTL FSEN+ P+ N G   +N +S ++ +   G+                    
Sbjct: 235  VLESPTSTLTFSENAPPVMNSGAVGENSISMIEFVGTSGSTETGIIKEEGEHDWKSLSNS 294

Query: 644  XXXXXXXXKMQPSHNDMGFTMETPWLAQSSKSGHDHIPVTNFI--EGFTSLLLANSDDRN 471
                     +  + +DM  +ME PW   S ++  D++ V   +  EGFT LLL++S +R+
Sbjct: 295  SHLPDNSVSLTSTLHDMTISMEAPWNPDSLRANCDNVHVGKNVMEEGFTHLLLSDSAERS 354

Query: 470  SVDHSGDSDNA----DGTGCDEYEENKSYWNNILNLVNSSPSDSPVF 342
              D   DSD++     G+G + YE+NK+YWN+ILNLVNSSPS+SP+F
Sbjct: 355  LSDDGKDSDHSGGSGSGSGSNYYEDNKNYWNSILNLVNSSPSNSPMF 401


Top