BLASTX nr result

ID: Coptis24_contig00003557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003557
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532180.1| PREDICTED: cellulose synthase-like protein E...   207   1e-87
gb|AFZ78594.1| cellulose synthase-like protein [Populus tomentosa]    201   6e-85
ref|XP_002300383.1| predicted protein [Populus trichocarpa] gi|2...   197   7e-84
emb|CBI29575.3| unnamed protein product [Vitis vinifera]              194   5e-82
ref|XP_003635559.1| PREDICTED: cellulose synthase-like protein E...   194   5e-82

>ref|XP_003532180.1| PREDICTED: cellulose synthase-like protein E1-like [Glycine max]
          Length = 736

 Score =  207 bits (526), Expect(2) = 1e-87
 Identities = 95/175 (54%), Positives = 126/175 (72%), Gaps = 1/175 (0%)
 Frame = -2

Query: 522  PPLFLLKGVSLFPRISSPWFLPFAYVVITENTYSLIEFLLCGGTFQSWWNEQRMWMYKRT 343
            P L+LLKG+ LFP+ISSPWF+PFAYV++ E TYSL+EF  CGGTFQ WWN+QR+W+YKRT
Sbjct: 540  PSLYLLKGIPLFPKISSPWFIPFAYVIVGETTYSLLEFFFCGGTFQGWWNDQRIWLYKRT 599

Query: 342  TSYFFSFVDTCLKLLGYTNSAFEITAKVSDQDVSQRYEKDIFEFGNSSPMXXXXXXXXXX 163
            +SY F+ +DT LKL G++ S F IT KV+++D S+R+EK+I EFG SSPM          
Sbjct: 600  SSYLFACIDTILKLFGFSESTFTITTKVTEEDASKRHEKEIMEFGTSSPMLTVLATLALL 659

Query: 162  XXXXLVGGL-NRIIKSRDINDLQSMFLQILLTGIVVILNLPLYWGLFFRKDNGRM 1
                 +  L + I+   DI   ++M LQ+LL G +V +NLP+Y GLF RKDNGR+
Sbjct: 660  NLFCFLSVLKDAILGEGDIGAYETMGLQVLLCGFLVFINLPIYQGLFLRKDNGRL 714



 Score =  143 bits (360), Expect(2) = 1e-87
 Identities = 65/85 (76%), Positives = 70/85 (82%)
 Frame = -1

Query: 865 TEWGKEMGLKYGCPVEDVITGLAIQCRGWKSVYFNPTRTGFFGIAPITLAQTLVQHKRWS 686
           T WGKEMGLKYGCPVEDVITGL+IQC+GWKSVY+NP R  F G+AP TL QTLVQHKRWS
Sbjct: 432 TLWGKEMGLKYGCPVEDVITGLSIQCQGWKSVYYNPPRKAFLGLAPTTLPQTLVQHKRWS 491

Query: 685 EGDFQIILSKYGPLSQGVGRIKLGL 611
           EGD QI+LSKY P   G GRI  GL
Sbjct: 492 EGDLQILLSKYSPAWYGFGRINFGL 516


>gb|AFZ78594.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 736

 Score =  201 bits (511), Expect(2) = 6e-85
 Identities = 98/175 (56%), Positives = 128/175 (73%), Gaps = 1/175 (0%)
 Frame = -2

Query: 522  PPLFLLKGVSLFPRISSPWFLPFAYVVITENTYSLIEFLLCGGTFQSWWNEQRMWMYKRT 343
            P LFLLKG+SLFP++SSPWFLPFAYV+  +  YSL+EFL   GT   WWN+QR+W+YKRT
Sbjct: 540  PSLFLLKGISLFPQVSSPWFLPFAYVIFAKYIYSLVEFLWADGTVLGWWNDQRIWLYKRT 599

Query: 342  TSYFFSFVDTCLKLLGYTNSAFEITAKVSDQDVSQRYEKDIFEFGNSSPMXXXXXXXXXX 163
            +SY F+ +DT LK LG+ ++AF IT KV+D+DVSQRYEK++ EFG +SPM          
Sbjct: 600  SSYLFATIDTVLKTLGFGDTAFVITDKVADEDVSQRYEKEMMEFGATSPMFEVLSTLAML 659

Query: 162  XXXXLVGGLNRIIKSRDINDL-QSMFLQILLTGIVVILNLPLYWGLFFRKDNGRM 1
                LVG + ++I +  I+ L ++M LQILL G++VI+NLPLY GL  RKD GRM
Sbjct: 660  NLFCLVGAVKKVIMNYSIHRLHETMPLQILLCGVLVIVNLPLYQGLLLRKDKGRM 714



 Score =  140 bits (352), Expect(2) = 6e-85
 Identities = 63/85 (74%), Positives = 69/85 (81%)
 Frame = -1

Query: 865 TEWGKEMGLKYGCPVEDVITGLAIQCRGWKSVYFNPTRTGFFGIAPITLAQTLVQHKRWS 686
           T+WG E GLKYGCPVEDVITGL+IQC+GWKS YFNP R  F G+AP TL Q LVQHKRWS
Sbjct: 432 TKWGNETGLKYGCPVEDVITGLSIQCKGWKSAYFNPERKAFLGLAPTTLPQVLVQHKRWS 491

Query: 685 EGDFQIILSKYGPLSQGVGRIKLGL 611
           EGDFQI+LSKY P     GRI+LGL
Sbjct: 492 EGDFQILLSKYSPAWYAHGRIRLGL 516


>ref|XP_002300383.1| predicted protein [Populus trichocarpa] gi|222847641|gb|EEE85188.1|
            predicted protein [Populus trichocarpa]
          Length = 736

 Score =  197 bits (502), Expect(2) = 7e-84
 Identities = 96/175 (54%), Positives = 126/175 (72%), Gaps = 1/175 (0%)
 Frame = -2

Query: 522  PPLFLLKGVSLFPRISSPWFLPFAYVVITENTYSLIEFLLCGGTFQSWWNEQRMWMYKRT 343
            P LFLLKG+SLFP++SSPWFLPFAYV+  +  YSL+EFL   GT   WWN+QR+W+YKRT
Sbjct: 540  PSLFLLKGISLFPQVSSPWFLPFAYVIFAKYIYSLVEFLWADGTVLGWWNDQRIWLYKRT 599

Query: 342  TSYFFSFVDTCLKLLGYTNSAFEITAKVSDQDVSQRYEKDIFEFGNSSPMXXXXXXXXXX 163
            +SY F+ +DT LK LG+  +AF IT KV+D+DVSQRYEK++ EFG +SPM          
Sbjct: 600  SSYLFATIDTILKTLGFGETAFVITDKVADEDVSQRYEKEMMEFGATSPMFEILSTLAML 659

Query: 162  XXXXLVGGLNRIIKSRDINDL-QSMFLQILLTGIVVILNLPLYWGLFFRKDNGRM 1
                L G + ++I +  I+ L ++M LQILL G++V++NLPLY GL  RKD GRM
Sbjct: 660  NLFCLAGTVKKVIMNDSIDRLHETMPLQILLCGVLVLVNLPLYQGLLLRKDKGRM 714



 Score =  140 bits (352), Expect(2) = 7e-84
 Identities = 63/85 (74%), Positives = 69/85 (81%)
 Frame = -1

Query: 865 TEWGKEMGLKYGCPVEDVITGLAIQCRGWKSVYFNPTRTGFFGIAPITLAQTLVQHKRWS 686
           T+WG E GLKYGCPVEDVITGL+IQC+GWKS YFNP R  F G+AP TL Q LVQHKRWS
Sbjct: 432 TKWGNETGLKYGCPVEDVITGLSIQCKGWKSAYFNPERKAFLGLAPTTLPQVLVQHKRWS 491

Query: 685 EGDFQIILSKYGPLSQGVGRIKLGL 611
           EGDFQI+LSKY P     GRI+LGL
Sbjct: 492 EGDFQILLSKYSPAWYAHGRIRLGL 516


>emb|CBI29575.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  194 bits (493), Expect(2) = 5e-82
 Identities = 92/174 (52%), Positives = 123/174 (70%)
 Frame = -2

Query: 522  PPLFLLKGVSLFPRISSPWFLPFAYVVITENTYSLIEFLLCGGTFQSWWNEQRMWMYKRT 343
            P L LLKG+SLFP+ISS W LPFAYV+ +   YSL EF+ CGGT   WWN+QRMW++KRT
Sbjct: 540  PSLCLLKGISLFPKISSLWILPFAYVMSSSCAYSLGEFIWCGGTLLGWWNDQRMWVFKRT 599

Query: 342  TSYFFSFVDTCLKLLGYTNSAFEITAKVSDQDVSQRYEKDIFEFGNSSPMXXXXXXXXXX 163
            TS+FF F +T LK LG++ S+F +T+KV+D++ S+R+E++I EFG +SPM          
Sbjct: 600  TSHFFGFSETILKQLGFSRSSFAVTSKVADEEESKRFEQEIMEFGAASPMFTILATLALL 659

Query: 162  XXXXLVGGLNRIIKSRDINDLQSMFLQILLTGIVVILNLPLYWGLFFRKDNGRM 1
                 VGG+ R+I       L S+ LQILL G++V++NLP+Y GLFFRKD  RM
Sbjct: 660  NLFTFVGGIKRVIIDMQAQVLDSLLLQILLCGVLVLMNLPVYHGLFFRKDATRM 713



 Score =  137 bits (345), Expect(2) = 5e-82
 Identities = 61/85 (71%), Positives = 69/85 (81%)
 Frame = -1

Query: 865 TEWGKEMGLKYGCPVEDVITGLAIQCRGWKSVYFNPTRTGFFGIAPITLAQTLVQHKRWS 686
           T+WGKEMGLKYGCPVEDV+TGL+IQCRGWKS+YF P R  F G+AP TL Q+L+QHKRWS
Sbjct: 432 TQWGKEMGLKYGCPVEDVLTGLSIQCRGWKSIYFTPERKAFLGVAPTTLLQSLIQHKRWS 491

Query: 685 EGDFQIILSKYGPLSQGVGRIKLGL 611
           EGDFQI LS Y P + G  RI L L
Sbjct: 492 EGDFQIFLSSYCPFTYGHKRIPLKL 516


>ref|XP_003635559.1| PREDICTED: cellulose synthase-like protein E6-like [Vitis vinifera]
          Length = 734

 Score =  194 bits (493), Expect(2) = 5e-82
 Identities = 92/174 (52%), Positives = 123/174 (70%)
 Frame = -2

Query: 522  PPLFLLKGVSLFPRISSPWFLPFAYVVITENTYSLIEFLLCGGTFQSWWNEQRMWMYKRT 343
            P L LLKG+SLFP+ISS W LPFAYV+ +   YSL EF+ CGGT   WWN+QRMW++KRT
Sbjct: 540  PSLCLLKGISLFPKISSLWILPFAYVMSSSCAYSLGEFIWCGGTLLGWWNDQRMWVFKRT 599

Query: 342  TSYFFSFVDTCLKLLGYTNSAFEITAKVSDQDVSQRYEKDIFEFGNSSPMXXXXXXXXXX 163
            TS+FF F +T LK LG++ S+F +T+KV+D++ S+R+E++I EFG +SPM          
Sbjct: 600  TSHFFGFSETILKQLGFSRSSFAVTSKVADEEESKRFEQEIMEFGAASPMFTILATLALL 659

Query: 162  XXXXLVGGLNRIIKSRDINDLQSMFLQILLTGIVVILNLPLYWGLFFRKDNGRM 1
                 VGG+ R+I       L S+ LQILL G++V++NLP+Y GLFFRKD  RM
Sbjct: 660  NLFTFVGGIKRVIIDMQAQVLDSLLLQILLCGVLVLMNLPVYHGLFFRKDATRM 713



 Score =  137 bits (345), Expect(2) = 5e-82
 Identities = 61/85 (71%), Positives = 69/85 (81%)
 Frame = -1

Query: 865 TEWGKEMGLKYGCPVEDVITGLAIQCRGWKSVYFNPTRTGFFGIAPITLAQTLVQHKRWS 686
           T+WGKEMGLKYGCPVEDV+TGL+IQCRGWKS+YF P R  F G+AP TL Q+L+QHKRWS
Sbjct: 432 TQWGKEMGLKYGCPVEDVLTGLSIQCRGWKSIYFTPERKAFLGVAPTTLLQSLIQHKRWS 491

Query: 685 EGDFQIILSKYGPLSQGVGRIKLGL 611
           EGDFQI LS Y P + G  RI L L
Sbjct: 492 EGDFQIFLSSYCPFTYGHKRIPLKL 516


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