BLASTX nr result

ID: Coptis24_contig00003509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003509
         (2159 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278392.1| PREDICTED: probable LRR receptor-like serine...   516   e-144
emb|CBI15912.3| unnamed protein product [Vitis vinifera]              506   e-140
ref|XP_002299998.1| predicted protein [Populus trichocarpa] gi|2...   489   e-136
ref|XP_002313236.1| predicted protein [Populus trichocarpa] gi|2...   485   e-134
ref|XP_002273218.1| PREDICTED: probable LRR receptor-like serine...   481   e-133

>ref|XP_002278392.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At5g45840-like [Vitis vinifera]
          Length = 720

 Score =  516 bits (1330), Expect = e-144
 Identities = 247/357 (69%), Positives = 298/357 (83%), Gaps = 2/357 (0%)
 Frame = -2

Query: 1231 TWLIVTGSIGAAAIMSVLVVGILILRGNKAVIIKPWATGLSGQLQKAFVTGVPKLKRSEL 1052
            T LI++G +G++ ++ +  +GI+  R +K V +KPWATGLSGQLQKAFVTGVPKL R+EL
Sbjct: 364  TVLILSGVLGSSLVIFISAMGIIFCRSHKVVTVKPWATGLSGQLQKAFVTGVPKLNRAEL 423

Query: 1051 EIACEDFSNXXXXXXXXXVYKGTLSSGVEIAVTSTTVTSAKDWSKHLEGAFRKKIDTLSK 872
            E ACEDFSN         VYKGTLS+GVEIAVTS+ V S  DWSK+LE  FRKKIDTLSK
Sbjct: 424  ETACEDFSNIIGSLSDGTVYKGTLSNGVEIAVTSSAVASLGDWSKNLEAQFRKKIDTLSK 483

Query: 871  VNHKNFVNLLGFCEEEEPFTRMMIFEYAPNGTLFEHLHIKESEHLDWGVRLRIAMGIAYC 692
            VNHKNFVNL+GFCEE++PFTRMM+FEYAPNGTLFEHLHIKE+EHLDWG+RLRIAMG+AYC
Sbjct: 484  VNHKNFVNLIGFCEEDKPFTRMMVFEYAPNGTLFEHLHIKEAEHLDWGMRLRIAMGLAYC 543

Query: 691  LEHIHQMNPPVVHKKLHSSTIYLTEDYAAKISDFGFWNEPTMAKMRSAGMD--DTPSTDP 518
            LE++HQ+NPP+ H+KL SS+IYLTEDYAAKISDF FWNE T AKM S  M+  +TPS DP
Sbjct: 544  LEYMHQLNPPIAHQKLQSSSIYLTEDYAAKISDFSFWNEVTAAKMGSVAMELLETPSADP 603

Query: 517  ENNVYSFGVILLEMITGRLSNSLDDGPLVDWALNFLGRKRPFKDMVDPTLKSFQEDDIEK 338
            E+NVYS GVIL EMITGRL  S+D+GP  DWA ++L   +P ++MVDPTLKSFQE++++K
Sbjct: 604  ESNVYSLGVILFEMITGRLPYSVDNGPSSDWASDYLKMDQPSREMVDPTLKSFQEEELKK 663

Query: 337  LCQVITSCIHSDPNQRPKMSEVTAWLREITSMAPDRATPRLSPLWWAELEILSTEAS 167
            L QV+  C+H DP+QRP M EVTA L+EIT+M PD ATP+LSPLWWAELEI+S+EAS
Sbjct: 664  LLQVVKDCVHPDPSQRPTMREVTARLKEITTMGPDGATPKLSPLWWAELEIMSSEAS 720



 Score =  238 bits (607), Expect = 5e-60
 Identities = 120/225 (53%), Positives = 160/225 (71%)
 Frame = -2

Query: 2140 FNTMDKKRRYTILVLFLFFWNLDLSWSLNSEGVSLLRFRDKVVKDPYGALLNWNRNDGEE 1961
            FN    +   T++V+ L   +L L W LNSEG++LL+FR+ VVKDP+GAL +WN + GE 
Sbjct: 7    FNRFKLRAAMTMVVISLLHQHLRLCWCLNSEGLALLKFRESVVKDPFGALSDWNDSGGEV 66

Query: 1960 NPCSWFGIECSDGRVVILNLKDLCLEGTISPELGNLARVKSIVLRNNSFSGAIPEEIKDL 1781
            + CSWFG+ECSDG+VVILNL+DLCL GT++PE+G LA +KSI+LRNNSFSG IP++I +L
Sbjct: 67   DHCSWFGVECSDGKVVILNLRDLCLVGTMAPEVGKLAFIKSIILRNNSFSGNIPKDIGEL 126

Query: 1780 EDLEVLDLGYNNFSGPLPVXXXXXXXXXXXXXXXNKFLRGISPELNELWKLSEIQVDEKD 1601
            ++LEVLDLGYNNFSG  P                N+FL  ISPE+ EL  LSE QVDE  
Sbjct: 127  KELEVLDLGYNNFSGSFPSDFGNNQSLTILLLDNNEFLGSISPEIYELKMLSEYQVDENQ 186

Query: 1600 LSTSVHGKSCNSRSISRNIVEARDVAYRKLLQLEDSSVSRKAKDK 1466
            LS++  G +C SRSIS +  + RDV+YR++LQ+ D+    K ++K
Sbjct: 187  LSSAASGPTCKSRSISGDTAQPRDVSYRRVLQVVDAVGPPKEREK 231


>emb|CBI15912.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  506 bits (1302), Expect = e-140
 Identities = 242/338 (71%), Positives = 285/338 (84%), Gaps = 2/338 (0%)
 Frame = -2

Query: 1174 VGILILRGNKAVIIKPWATGLSGQLQKAFVTGVPKLKRSELEIACEDFSNXXXXXXXXXV 995
            +GI+  R +K V +KPWATGLSGQLQKAFVTGVPKL R+ELE ACEDFSN         V
Sbjct: 1    MGIIFCRSHKVVTVKPWATGLSGQLQKAFVTGVPKLNRAELETACEDFSNIIGSLSDGTV 60

Query: 994  YKGTLSSGVEIAVTSTTVTSAKDWSKHLEGAFRKKIDTLSKVNHKNFVNLLGFCEEEEPF 815
            YKGTLS+GVEIAVTS+ V S  DWSK+LE  FRKKIDTLSKVNHKNFVNL+GFCEE++PF
Sbjct: 61   YKGTLSNGVEIAVTSSAVASLGDWSKNLEAQFRKKIDTLSKVNHKNFVNLIGFCEEDKPF 120

Query: 814  TRMMIFEYAPNGTLFEHLHIKESEHLDWGVRLRIAMGIAYCLEHIHQMNPPVVHKKLHSS 635
            TRMM+FEYAPNGTLFEHLHIKE+EHLDWG+RLRIAMG+AYCLE++HQ+NPP+ H+KL SS
Sbjct: 121  TRMMVFEYAPNGTLFEHLHIKEAEHLDWGMRLRIAMGLAYCLEYMHQLNPPIAHQKLQSS 180

Query: 634  TIYLTEDYAAKISDFGFWNEPTMAKMRSAGMD--DTPSTDPENNVYSFGVILLEMITGRL 461
            +IYLTEDYAAKISDF FWNE T AKM S  M+  +TPS DPE+NVYS GVIL EMITGRL
Sbjct: 181  SIYLTEDYAAKISDFSFWNEVTAAKMGSVAMELLETPSADPESNVYSLGVILFEMITGRL 240

Query: 460  SNSLDDGPLVDWALNFLGRKRPFKDMVDPTLKSFQEDDIEKLCQVITSCIHSDPNQRPKM 281
              S+D+GP  DWA ++L   +P ++MVDPTLKSFQE++++KL QV+  C+H DP+QRP M
Sbjct: 241  PYSVDNGPSSDWASDYLKMDQPSREMVDPTLKSFQEEELKKLLQVVKDCVHPDPSQRPTM 300

Query: 280  SEVTAWLREITSMAPDRATPRLSPLWWAELEILSTEAS 167
             EVTA L+EIT+M PD ATP+LSPLWWAELEI+S+EAS
Sbjct: 301  REVTARLKEITTMGPDGATPKLSPLWWAELEIMSSEAS 338


>ref|XP_002299998.1| predicted protein [Populus trichocarpa] gi|222847256|gb|EEE84803.1|
            predicted protein [Populus trichocarpa]
          Length = 349

 Score =  489 bits (1260), Expect = e-136
 Identities = 235/341 (68%), Positives = 280/341 (82%), Gaps = 2/341 (0%)
 Frame = -2

Query: 1183 VLVVGILILRGNKAVIIKPWATGLSGQLQKAFVTGVPKLKRSELEIACEDFSNXXXXXXX 1004
            +  VG  + R +K V +KPWATGLSGQLQKAFVTGVPKLKR ELE+ACEDFSN       
Sbjct: 5    ISAVGFFLFRRSKVVTVKPWATGLSGQLQKAFVTGVPKLKRPELEVACEDFSNIIGPFSD 64

Query: 1003 XXVYKGTLSSGVEIAVTSTTVTSAKDWSKHLEGAFRKKIDTLSKVNHKNFVNLLGFCEEE 824
              VYKGTLSSGVEIAVTST V S +DWSK+LE  FR KIDTLSK+NHKNFVNL+GFCEE+
Sbjct: 65   GTVYKGTLSSGVEIAVTSTAVKSREDWSKNLEAQFRNKIDTLSKMNHKNFVNLIGFCEED 124

Query: 823  EPFTRMMIFEYAPNGTLFEHLHIKESEHLDWGVRLRIAMGIAYCLEHIHQMNPPVVHKKL 644
            EPFTR+M+FEYAPNGTLFEHLH+KE+EHLDWG+RLRIAMG+AYCLE++HQ+ PPV HK L
Sbjct: 125  EPFTRIMVFEYAPNGTLFEHLHVKEAEHLDWGMRLRIAMGVAYCLEYMHQLTPPVAHKNL 184

Query: 643  HSSTIYLTEDYAAKISDFGFWNEPTMAKMRSAGMD--DTPSTDPENNVYSFGVILLEMIT 470
             SS+IYLTEDYAAKISDF FWN+ T AK  S  M+  ++ S+DPE+N+YSFGVIL EMIT
Sbjct: 185  QSSSIYLTEDYAAKISDFSFWNDATAAKTGSPSMELLESQSSDPESNIYSFGVILYEMIT 244

Query: 469  GRLSNSLDDGPLVDWALNFLGRKRPFKDMVDPTLKSFQEDDIEKLCQVITSCIHSDPNQR 290
            GR+  ++D+  L DWA ++L  ++P K+ VDPTLKSFQED++EKL +VI +CIH DP  R
Sbjct: 245  GRIPYAVDN--LADWASDYLRGEQPLKEKVDPTLKSFQEDELEKLSEVIRNCIHPDPKHR 302

Query: 289  PKMSEVTAWLREITSMAPDRATPRLSPLWWAELEILSTEAS 167
            P M E+ A L+EITS+ PD ATP+LSPLWWAELEI+STE S
Sbjct: 303  PTMKEIAAKLKEITSVGPDGATPKLSPLWWAELEIMSTEGS 343


>ref|XP_002313236.1| predicted protein [Populus trichocarpa] gi|222849644|gb|EEE87191.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  485 bits (1248), Expect = e-134
 Identities = 230/341 (67%), Positives = 278/341 (81%), Gaps = 2/341 (0%)
 Frame = -2

Query: 1183 VLVVGILILRGNKAVIIKPWATGLSGQLQKAFVTGVPKLKRSELEIACEDFSNXXXXXXX 1004
            +  +GI   R +K V ++PWATGLSGQLQ AFVTGVPKLKRSELE ACEDFSN       
Sbjct: 5    ISAIGIFFFRSSKVVTVRPWATGLSGQLQNAFVTGVPKLKRSELEAACEDFSNIIGSFSD 64

Query: 1003 XXVYKGTLSSGVEIAVTSTTVTSAKDWSKHLEGAFRKKIDTLSKVNHKNFVNLLGFCEEE 824
               YKGTLSSGVEIAV ST V S +DW K+LE  FRKKIDTLSK+NHKNFVNL+GFCEE 
Sbjct: 65   GTAYKGTLSSGVEIAVMSTAVRSHEDWLKNLEAQFRKKIDTLSKMNHKNFVNLIGFCEEN 124

Query: 823  EPFTRMMIFEYAPNGTLFEHLHIKESEHLDWGVRLRIAMGIAYCLEHIHQMNPPVVHKKL 644
            +PFTRMM+FEYAPNGTLFEHLH+KE+EHLDWG+RLRIAMG+AYCL+++HQ+ PP+ HK L
Sbjct: 125  DPFTRMMVFEYAPNGTLFEHLHVKEAEHLDWGMRLRIAMGMAYCLDYMHQLTPPIAHKHL 184

Query: 643  HSSTIYLTEDYAAKISDFGFWNEPTMAKMRSAGMD--DTPSTDPENNVYSFGVILLEMIT 470
             SSTIYLTEDYAAKISDF F N+ T AK+ SA M+  ++ ++DPE N+YSFGVIL EMIT
Sbjct: 185  QSSTIYLTEDYAAKISDFSFGNDATAAKIGSASMELLESQTSDPEGNIYSFGVILFEMIT 244

Query: 469  GRLSNSLDDGPLVDWALNFLGRKRPFKDMVDPTLKSFQEDDIEKLCQVITSCIHSDPNQR 290
            GR+  ++D+G L DWA ++L  +R  K++VDPTLKSFQE+++EKL +VI +CIH DP QR
Sbjct: 245  GRIPYAVDNGSLADWASDYLRGERSLKEIVDPTLKSFQENELEKLSEVIRNCIHPDPKQR 304

Query: 289  PKMSEVTAWLREITSMAPDRATPRLSPLWWAELEILSTEAS 167
            P M E+ + L+EIT+M PD ATP+LSPLWWAELEI+STE S
Sbjct: 305  PTMKEIASKLKEITAMEPDGATPKLSPLWWAELEIMSTEGS 345


>ref|XP_002273218.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            MRH1-like [Vitis vinifera]
          Length = 654

 Score =  481 bits (1239), Expect = e-133
 Identities = 234/355 (65%), Positives = 278/355 (78%), Gaps = 2/355 (0%)
 Frame = -2

Query: 1225 LIVTGSIGAAAIMSVLVVGILILRGNKAVIIKPWATGLSGQLQKAFVTGVPKLKRSELEI 1046
            L++ G IG + ++ + ++ I + R NK   +KPWATGLSGQLQK FVTGVPKLKRSELE 
Sbjct: 300  LLLVGVIGGSVLVFICIICIYLFRTNKVATVKPWATGLSGQLQKVFVTGVPKLKRSELET 359

Query: 1045 ACEDFSNXXXXXXXXXVYKGTLSSGVEIAVTSTTVTSAKDWSKHLEGAFRKKIDTLSKVN 866
            ACEDFSN         VYKGTLSSGVEIAVTS  VTS+KDWSK+LE  FRKKI+ LSKVN
Sbjct: 360  ACEDFSNVIGSSSIGTVYKGTLSSGVEIAVTSAAVTSSKDWSKNLEVQFRKKIERLSKVN 419

Query: 865  HKNFVNLLGFCEEEEPFTRMMIFEYAPNGTLFEHLHIKESEHLDWGVRLRIAMGIAYCLE 686
            HKNFVNLLG+CEEEEPFTRMM+FEYAPNGTLFEHLHIKE+EHLDW +RLR AMG+AY L 
Sbjct: 420  HKNFVNLLGYCEEEEPFTRMMVFEYAPNGTLFEHLHIKEAEHLDWAMRLRAAMGMAYYLN 479

Query: 685  HIHQMNPPVVHKKLHSSTIYLTEDYAAKISDFGFWNEPTMAKMRS--AGMDDTPSTDPEN 512
            HIHQ+ PP+ H+ L+SS + L EDYAAK+SDF  WN     +M+S    +  +PS DPE+
Sbjct: 480  HIHQLTPPIAHENLNSSAVNLAEDYAAKVSDFSVWNVMAATEMKSPRVELSASPSADPES 539

Query: 511  NVYSFGVILLEMITGRLSNSLDDGPLVDWALNFLGRKRPFKDMVDPTLKSFQEDDIEKLC 332
            NVYSFGVIL EMITGR+  S+D+G L DWA N+L   RP K+MVDPTLK FQE+ +E + 
Sbjct: 540  NVYSFGVILFEMITGRVPYSVDNGSLEDWASNYLQGDRPIKEMVDPTLKFFQEEQLESIR 599

Query: 331  QVITSCIHSDPNQRPKMSEVTAWLREITSMAPDRATPRLSPLWWAELEILSTEAS 167
            +VI SC++ DP QRP M +VTA +REIT + PD A P+LSPLWWAELEILSTEAS
Sbjct: 600  EVIKSCVNPDPKQRPTMRDVTARMREITEIGPDGAIPKLSPLWWAELEILSTEAS 654



 Score =  204 bits (520), Expect = 6e-50
 Identities = 106/205 (51%), Positives = 140/205 (68%), Gaps = 5/205 (2%)
 Frame = -2

Query: 2107 ILVLFLFFWNLDLSWSLNSEGVSLLRFRDKVVKDPYGALLNWNRNDGEENPCSWFGIECS 1928
            ++++   + NL L WSLN EG++LLRFR++VV DP+ AL NW+  DGE +PCSWFG+ECS
Sbjct: 14   VVIMCSLYQNLGLCWSLNDEGLALLRFRERVVSDPFRALANWD--DGELDPCSWFGVECS 71

Query: 1927 DGRVVILNLKDLCLEGTISPELGNLARVKSIVLRNNSFSGAIPEEIKDLEDLEVLDLGYN 1748
            DG+VVILNLKDLCL GT++PELG+LA +KSI+LRNNSFSG IPEEI +L++LEVLDLGYN
Sbjct: 72   DGKVVILNLKDLCLRGTLAPELGSLANIKSIILRNNSFSGTIPEEIGELKELEVLDLGYN 131

Query: 1747 NFSGPLPVXXXXXXXXXXXXXXXNKFLRGISPELNELWKLSEIQVDEKDLS-----TSVH 1583
            N   P+P                N  +  +  +++EL  LSE QVDE  LS     +S+H
Sbjct: 132  NLCVPIPANLGNNLSLTILLLDNNVLISSLPSQIHELVVLSESQVDENRLSNIAKISSLH 191

Query: 1582 GKSCNSRSISRNIVEARDVAYRKLL 1508
            G SC     +R   +  DV + +LL
Sbjct: 192  GGSC-----TRKTDQTEDVVHHRLL 211


Top