BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003508
         (1213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing ...   357   3e-96
ref|XP_002524282.1| nucleic acid binding protein, putative [Rici...   357   3e-96
ref|XP_002329093.1| predicted protein [Populus trichocarpa] gi|2...   357   3e-96
ref|XP_004141224.1| PREDICTED: PAP-associated domain-containing ...   343   4e-92
dbj|BAE71308.1| hypothetical protein [Trifolium pratense]             341   2e-91

>ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing protein 5-like [Vitis
            vinifera] gi|302143015|emb|CBI20310.3| unnamed protein
            product [Vitis vinifera]
          Length = 497

 Score =  357 bits (917), Expect = 3e-96
 Identities = 191/297 (64%), Positives = 225/297 (75%), Gaps = 2/297 (0%)
 Frame = -2

Query: 1212 EKRSGVAFDISFDVQNGPKAAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGS 1033
            EKRS VAFDISFDV+NGPKAA +I+DAIS+ P LRPLCLILKVFLQQRELNEVYSGGIGS
Sbjct: 210  EKRSSVAFDISFDVENGPKAAEYIQDAISKWPPLRPLCLILKVFLQQRELNEVYSGGIGS 269

Query: 1032 YALLTMLIAQLQMHWKGQYYQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGT 853
            YALL MLIA LQ        Q   AS E NLG+LLVNFFDFYGRKLN  D+GV+C   GT
Sbjct: 270  YALLAMLIAMLQN------LQEWNASVEHNLGVLLVNFFDFYGRKLNTVDIGVTCNGPGT 323

Query: 852  FFLKNRKGFLNEDRPYLLSIEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTILSL 673
            FFLK+ KGF+N+ + +L+SIEDPQ P NDIG++SFN+ QIRSAF MAFSTLTN +TIL L
Sbjct: 324  FFLKSTKGFVNKGQKFLISIEDPQLPGNDIGKNSFNYFQIRSAFSMAFSTLTNARTILGL 383

Query: 672  GCSRSILGTIIRPDSILLERKGGANGEVTFDSLLPGAGEPLLAQEQSEQEMMFNWQFD-- 499
              +RSILGTIIRPD ILLERKGG+NG +TFD LLPGAGEP L+ +   QE++ NWQ +  
Sbjct: 384  DPNRSILGTIIRPDPILLERKGGSNGTMTFDHLLPGAGEP-LSPQTGGQELLCNWQVEDA 442

Query: 498  EEEPLPRQNGNLGVDSLNSSGKRKKVLREKRVSLSNGREVVQRNYHANKLRKRWKSQ 328
            EEEPLPR N   G  S NSSGK++K  +E+    +  +E        +K ++RWK Q
Sbjct: 443  EEEPLPRSNPIAGDGSANSSGKKRKASKER--LRNKVKEHADMEKDKSKKKRRWKHQ 497


>ref|XP_002524282.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223536473|gb|EEF38121.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 526

 Score =  357 bits (916), Expect = 3e-96
 Identities = 192/297 (64%), Positives = 223/297 (75%), Gaps = 1/297 (0%)
 Frame = -2

Query: 1212 EKRSGVAFDISFDVQNGPKAAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGS 1033
            EKRSGV+FDISFDV NGPKAA FIKDA+ + PALRPL LILKVFLQQRELNEVYSGGIGS
Sbjct: 230  EKRSGVSFDISFDVDNGPKAAEFIKDAVRKWPALRPLSLILKVFLQQRELNEVYSGGIGS 289

Query: 1032 YALLTMLIAQLQMHWKGQYYQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGT 853
            YALLTML+A L            KAS E NLG+LLV FFDFYGRKLN  DVGVSCK AGT
Sbjct: 290  YALLTMLMAVL------------KASSEHNLGVLLVYFFDFYGRKLNTTDVGVSCKGAGT 337

Query: 852  FFLKNRKGFLNEDRPYLLSIEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTILSL 673
            FF K +KGF+N+ RP+L++IEDPQAP+NDIG++SFN+SQIRSAF MAFSTLTN +TILSL
Sbjct: 338  FFSKRKKGFMNKGRPFLIAIEDPQAPDNDIGKNSFNYSQIRSAFSMAFSTLTNPRTILSL 397

Query: 672  GCSRSILGTIIRPDSILLERKGGANGEVTFDSLLPGAGEPLLAQEQSEQEMMFNWQF-DE 496
            G +RSILGTIIRPDSILLERK G NGEVTF SLLPGAGE L+      QE++ NWQ  D+
Sbjct: 398  GPNRSILGTIIRPDSILLERKAGCNGEVTFSSLLPGAGE-LIQSHYDHQEILGNWQLDDD 456

Query: 495  EEPLPRQNGNLGVDSLNSSGKRKKVLREKRVSLSNGREVVQRNYHANKLRKRWKSQK 325
            EE LPR  G        SSGK++K  ++K         + + ++  +  RK  K Q+
Sbjct: 457  EEVLPRGGGIAEDSGAQSSGKKRKSSKDKSTKREENGSIGKVSHEESGSRKDRKKQR 513


>ref|XP_002329093.1| predicted protein [Populus trichocarpa] gi|222869762|gb|EEF06893.1|
            predicted protein [Populus trichocarpa]
          Length = 543

 Score =  357 bits (916), Expect = 3e-96
 Identities = 193/310 (62%), Positives = 230/310 (74%), Gaps = 12/310 (3%)
 Frame = -2

Query: 1212 EKRSGVAFDISFDVQNGPKAAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGS 1033
            EKRSGV+FDISFDV  GP AA FIK+AIS+ P LRPLCLILKVFLQQRELNEVYSGGI S
Sbjct: 230  EKRSGVSFDISFDVNGGPIAAEFIKNAISKWPELRPLCLILKVFLQQRELNEVYSGGISS 289

Query: 1032 YALLTMLIAQLQMHWKGQYYQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGT 853
            YALL ML+A LQ H      +  +AS E+NLG+LL++FFDFYGRKLN  +VGVSCK  GT
Sbjct: 290  YALLAMLMAMLQNH------RECQASLERNLGLLLIHFFDFYGRKLNTTNVGVSCKGTGT 343

Query: 852  FFLKNRKGFLNEDRPYLLSIEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTILSL 673
            FF K  KGF+N  RP+L++IEDPQAPENDIG++SFN+ QIRSAF MAF+TLTN KTILSL
Sbjct: 344  FFSKRTKGFMNNGRPFLIAIEDPQAPENDIGKNSFNYFQIRSAFAMAFTTLTNPKTILSL 403

Query: 672  GCSRSILGTIIRPDSILLERKGGANGEVTFDSLLPGAGEPLLAQEQSEQEMMFNWQF-DE 496
            G +RSILGTIIRPD +LLERKGG NGEVTF SLLPGAGEP L     +QE++ NWQ  DE
Sbjct: 404  GPNRSILGTIIRPDPVLLERKGGKNGEVTFSSLLPGAGEP-LQSNYGQQEILCNWQLDDE 462

Query: 495  EEPLPRQNGNLGVDSLNSSGKRKKVLRE----KRVSLSNG-------REVVQRNYHANKL 349
            EE LPR  G+ G  S +SSGK++K   +    K+ S  NG        E   +   + K 
Sbjct: 463  EEALPRGGGDAGDGSAHSSGKKRKASSKEKSRKKKSKENGDIGKVRHDESGSKKEKSTKK 522

Query: 348  RKRWKSQKNA 319
            ++RW+   ++
Sbjct: 523  KQRWRKNDSS 532


>ref|XP_004141224.1| PREDICTED: PAP-associated domain-containing protein 5-like [Cucumis
            sativus]
          Length = 544

 Score =  343 bits (881), Expect = 4e-92
 Identities = 185/300 (61%), Positives = 221/300 (73%), Gaps = 4/300 (1%)
 Frame = -2

Query: 1212 EKRSGVAFDISFDVQNGPKAAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGS 1033
            EK+SG++FDISFDVQNGPKAA FIK A+S+ P LRPLCLILKVFLQQRELNEVYSGG+GS
Sbjct: 231  EKQSGISFDISFDVQNGPKAADFIKGAVSKWPPLRPLCLILKVFLQQRELNEVYSGGLGS 290

Query: 1032 YALLTMLIAQLQMHWKGQYYQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGT 853
            YALLTML+A LQ            +S E NLG+LLV+FFDFYGRKLN  DVGVSC   G 
Sbjct: 291  YALLTMLMAMLQS------INVPPSSLEHNLGVLLVHFFDFYGRKLNTSDVGVSCNAGGI 344

Query: 852  FFLKNRKGFLNEDRPYLLSIEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTILSL 673
            FF K+ +GF+ + RP LLSIEDPQAP+NDIG++SFN+ QIRSAF MA+S LTN KT+L L
Sbjct: 345  FFSKSYRGFMTKGRPCLLSIEDPQAPDNDIGKNSFNYFQIRSAFAMAYSILTNVKTVLGL 404

Query: 672  GCSRSILGTIIRPDSILLERKGGANGEVTFDSLLPGAGEPLLAQEQ-SEQEMMFNWQFDE 496
            G +RSILGTIIRPD +LL+RKGG +GEVTF+SLLPGAGEP+   E   +QEM+ NWQF +
Sbjct: 405  GPNRSILGTIIRPDPVLLKRKGGRHGEVTFNSLLPGAGEPVQQPEYGDDQEMLCNWQFGD 464

Query: 495  EEPLPRQNG---NLGVDSLNSSGKRKKVLREKRVSLSNGREVVQRNYHANKLRKRWKSQK 325
            EEPLPR N    N+G      S K+++  REK           +R +  N  RK   S+K
Sbjct: 465  EEPLPRGNDTPENVG----TPSSKKQRKTREKSRKKEKESHSSKRRHEDNGSRKEQSSKK 520


>dbj|BAE71308.1| hypothetical protein [Trifolium pratense]
          Length = 518

 Score =  341 bits (874), Expect = 2e-91
 Identities = 181/302 (59%), Positives = 226/302 (74%), Gaps = 9/302 (2%)
 Frame = -2

Query: 1212 EKRSGVAFDISFDVQNGPKAAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGS 1033
            EK+SG++FDISFD+ NGPKAA +I++A+++ P LRPLCLILKVFLQQRELNEVYSGGIGS
Sbjct: 216  EKKSGLSFDISFDIDNGPKAAEYIQEAVAKWPQLRPLCLILKVFLQQRELNEVYSGGIGS 275

Query: 1032 YALLTMLIAQLQMHWKGQYYQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGT 853
            YALLTML+A L+        + S+ + E NLG+LLV+FFDFYGRKLN  DVGVSC   GT
Sbjct: 276  YALLTMLMAMLRN------VRQSQPTAEHNLGVLLVHFFDFYGRKLNTSDVGVSCIGEGT 329

Query: 852  FFLKNRKGFLNEDRPYLLSIEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTILSL 673
            FF K+ +GF N+ RP+LL I+DPQ P+NDIG++SFN+ Q+RSAF MAF+TLTN K ILSL
Sbjct: 330  FFRKSSRGFYNKTRPFLLGIQDPQTPDNDIGKNSFNYFQVRSAFLMAFTTLTNPKVILSL 389

Query: 672  GCSRSILGTIIRPDSILLERKGGANGEVTFDSLLPGAGEPLLAQEQSEQEMMFNWQFD-E 496
            G +RSILGTIIRPD +L+ERKGG+NGE+TF+SLLPGAGEP + Q+  E +M+ NWQ D E
Sbjct: 390  GPNRSILGTIIRPDPVLMERKGGSNGEMTFNSLLPGAGEP-IQQQYGEHDMLCNWQLDFE 448

Query: 495  EEPLPRQNG-NLGVDSLNSSGKRK-----KVLREKRVSLSN--GREVVQRNYHANKLRKR 340
            EEPLPR +G N G +    S K+K     K  +E R S  N     + +   H    +KR
Sbjct: 449  EEPLPRGDGENTGAEPSRRSSKKKRKSASKENKENRDSRKNKENSSMTENGVHKKHKKKR 508

Query: 339  WK 334
             K
Sbjct: 509  AK 510