BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003420
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299341.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27
ref|XP_004169818.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   125   9e-27
ref|XP_004152157.1| PREDICTED: uncharacterized protein LOC101204...   125   9e-27
ref|XP_002512657.1| pentatricopeptide repeat-containing protein,...   124   1e-26
ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containi...   123   3e-26

>ref|XP_002299341.1| predicted protein [Populus trichocarpa] gi|222846599|gb|EEE84146.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  127 bits (319), Expect = 2e-27
 Identities = 69/148 (46%), Positives = 93/148 (62%), Gaps = 4/148 (2%)
 Frame = -2

Query: 649 AFSNTKHHTDIQVTDISGSAEVEFCSIKLPVSEQQESSASNWMGPVVKMSLPSYSGNTEY 470
           A S+TK   D+ VT+ +G +  + C+IKL  S         W GP +KMSLPS+SG TEY
Sbjct: 151 ASSSTKDCMDVLVTETNGPSATDICNIKLTTSVPGVKF-DKWKGPAIKMSLPSFSGRTEY 209

Query: 469 NPQLLKYSCQIECRVRPVKTAQVSGPIHSDKIDGEKSSNPIDFPVGELGGNDTRER---- 302
           NP LLKY+C IECRVR V+ A+VSGP    K D E+S + +     E    +  +     
Sbjct: 210 NPNLLKYTCSIECRVRAVQAAKVSGPSSPPKHDTEESQSQLKLKTVEPSSRELLDEGQNL 269

Query: 301 SISVLLSKPLVALQFNFLRMQVEAPTLV 218
           SISV+LSKP++AL+ + L+MQVEAP +V
Sbjct: 270 SISVMLSKPILALELSCLKMQVEAPVVV 297


>ref|XP_004169818.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101230754 [Cucumis sativus]
          Length = 289

 Score =  125 bits (313), Expect = 9e-27
 Identities = 69/143 (48%), Positives = 92/143 (64%)
 Frame = -2

Query: 646 FSNTKHHTDIQVTDISGSAEVEFCSIKLPVSEQQESSASNWMGPVVKMSLPSYSGNTEYN 467
           F N K+   +QV ++ G   ++ C+I L  S       S WMGP +KMSLPSYSG+TEY 
Sbjct: 143 FHNQKNQEHVQVAEVKGPTSMDVCNINLSFSVP----FSKWMGPAIKMSLPSYSGHTEYT 198

Query: 466 PQLLKYSCQIECRVRPVKTAQVSGPIHSDKIDGEKSSNPIDFPVGELGGNDTRERSISVL 287
           P+LLKYSCQI CRVR VK A VS P  +   DG+  S+      GE G ++ +    SVL
Sbjct: 199 PELLKYSCQIRCRVRAVKPATVSIPALNRAEDGDHHSHIT--RTGEYGEHE-QSLCTSVL 255

Query: 286 LSKPLVALQFNFLRMQVEAPTLV 218
           LSKP++AL+F+ + MQV+APT+V
Sbjct: 256 LSKPILALEFSCMEMQVQAPTVV 278


>ref|XP_004152157.1| PREDICTED: uncharacterized protein LOC101204328 [Cucumis sativus]
          Length = 289

 Score =  125 bits (313), Expect = 9e-27
 Identities = 69/143 (48%), Positives = 92/143 (64%)
 Frame = -2

Query: 646 FSNTKHHTDIQVTDISGSAEVEFCSIKLPVSEQQESSASNWMGPVVKMSLPSYSGNTEYN 467
           F N K+   +QV ++ G   ++ C+I L  S       S WMGP +KMSLPSYSG+TEY 
Sbjct: 143 FHNQKNQEHVQVAEVKGPTSMDVCNINLSFSVP----FSKWMGPAIKMSLPSYSGHTEYT 198

Query: 466 PQLLKYSCQIECRVRPVKTAQVSGPIHSDKIDGEKSSNPIDFPVGELGGNDTRERSISVL 287
           P+LLKYSCQI CRVR VK A VS P  +   DG+  S+      GE G ++ +    SVL
Sbjct: 199 PELLKYSCQIRCRVRAVKPATVSIPALNRAEDGDHHSHIT--RTGEYGEHE-QSLCTSVL 255

Query: 286 LSKPLVALQFNFLRMQVEAPTLV 218
           LSKP++AL+F+ + MQV+APT+V
Sbjct: 256 LSKPILALEFSCMEMQVQAPTVV 278


>ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548618|gb|EEF50109.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 837

 Score =  124 bits (312), Expect = 1e-26
 Identities = 73/164 (44%), Positives = 101/164 (61%), Gaps = 9/164 (5%)
 Frame = -2

Query: 649  AFSNTKHHTDIQVTDISGSAEVEFCSIKLPVSEQQESSASNWMGPVVKMSLPSYSGNTEY 470
            A S      D+QVT+I+G++    C+I L  +         WMGP +KMSLPS+SG TE+
Sbjct: 679  ALSRPDDRMDVQVTEINGASTTNICNINLATAVP----GIKWMGPAIKMSLPSFSGRTEH 734

Query: 469  NPQLLKYSCQIECRVRPVKTAQVSGPIHSDKIDGEKS-----SNPIDFPVGELGGNDTRE 305
            NP LLKYSC IECRVR V+ A++S P  + K   E+S         D   GE+  N  + 
Sbjct: 735  NPNLLKYSCNIECRVRAVRPAEISVPFPASKHRTEESLGHHNCKIADSVTGEILDNG-QN 793

Query: 304  RSISVLLSKPLVALQFNFLRMQVEAPTLV--CSPP--RDAIGCS 185
             S+SV+LS+P++AL+FN+L+MQVEAP+ V  CS    R ++G S
Sbjct: 794  LSLSVMLSRPILALEFNYLKMQVEAPSPVSHCSKSSCRTSLGVS 837


>ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic-like [Vitis vinifera]
          Length = 835

 Score =  123 bits (309), Expect = 3e-26
 Identities = 73/162 (45%), Positives = 97/162 (59%), Gaps = 8/162 (4%)
 Frame = -2

Query: 646  FSNTKHHTDIQVTDISGSAEVEFCSIKLPVSEQQESSASNWMGPVVKMSLPSYSGNTEYN 467
            F++ K   D+QVT+I G    + CS+ L  +         WMGP +KMSLPS+SG+T YN
Sbjct: 675  FNSPKDCMDVQVTEIEGHTAADACSVNLNTAVPL-LKPEKWMGPAIKMSLPSFSGHTVYN 733

Query: 466  PQLLKYSCQIECRVRPVKTAQVSGPIHSDK--IDGEKSSNPID--FPVGELGGNDTRERS 299
            P LLKYSCQIECRVR VK A+VS P    K   + EK  +P    F   +    +T E  
Sbjct: 734  PNLLKYSCQIECRVRAVKPARVSSPSPGPKNEKENEKEGSPRHQIFSSMDSTAVETIENG 793

Query: 298  ----ISVLLSKPLVALQFNFLRMQVEAPTLVCSPPRDAIGCS 185
                +SV+LSKP++AL+FN L MQVEAP +V    ++ +G S
Sbjct: 794  ENLCVSVMLSKPVLALEFNCLNMQVEAPIVVSHCSKNTLGGS 835