BLASTX nr result

ID: Coptis24_contig00003211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003211
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW79830.1| putative protein kinase superfamily protein [Zea ...    63   1e-07
emb|CAN68567.1| hypothetical protein VITISV_013174 [Vitis vinifera]    63   1e-07
ref|XP_002263800.1| PREDICTED: probable receptor-like protein ki...    63   1e-07
ref|XP_002263510.2| PREDICTED: probable receptor-like protein ki...    62   2e-07
ref|XP_002264027.1| PREDICTED: probable receptor-like protein ki...    62   2e-07

>gb|AFW79830.1| putative protein kinase superfamily protein [Zea mays]
          Length = 618

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 27/56 (48%), Positives = 43/56 (76%)
 Frame = +1

Query: 850  TMSSISPKRYSYSQLKKITSNFSSKIGEGGFGILYKGIIQRNQVEVPVAVKILKRS 1017
            T  ++ P+RY++S+++K+T  FSS++G+GGFG +YKG +    V VPVAVK+L+ S
Sbjct: 301  TYRTLKPRRYTFSEVRKMTRRFSSRLGQGGFGSVYKGELPNGGVPVPVAVKMLEDS 356


>emb|CAN68567.1| hypothetical protein VITISV_013174 [Vitis vinifera]
          Length = 1241

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 30/53 (56%), Positives = 41/53 (77%)
 Frame = +1

Query: 859  SISPKRYSYSQLKKITSNFSSKIGEGGFGILYKGIIQRNQVEVPVAVKILKRS 1017
            ++ P RYSYS LKKIT+NF +K+G+GGFG +YKGI+Q  ++   VAVK+L  S
Sbjct: 249  NLQPIRYSYSHLKKITNNFKNKLGQGGFGSVYKGILQSGRI---VAVKVLVMS 298


>ref|XP_002263800.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
            [Vitis vinifera]
          Length = 688

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 30/53 (56%), Positives = 41/53 (77%)
 Frame = +1

Query: 859  SISPKRYSYSQLKKITSNFSSKIGEGGFGILYKGIIQRNQVEVPVAVKILKRS 1017
            ++ P RYSYS LKKIT+NF +K+G+GGFG +YKGI+Q  ++   VAVK+L  S
Sbjct: 352  NLQPIRYSYSHLKKITNNFRNKLGQGGFGSVYKGILQSGRI---VAVKVLVMS 401


>ref|XP_002263510.2| PREDICTED: probable receptor-like protein kinase At1g67000-like
            [Vitis vinifera]
          Length = 672

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 29/53 (54%), Positives = 40/53 (75%)
 Frame = +1

Query: 859  SISPKRYSYSQLKKITSNFSSKIGEGGFGILYKGIIQRNQVEVPVAVKILKRS 1017
            ++ P RYSYS LKK+T NF +K+G+GGFG +YKGI+Q  ++   VAVK+L  S
Sbjct: 336  NLQPIRYSYSHLKKVTDNFKNKLGQGGFGSVYKGILQSGRI---VAVKVLVMS 385


>ref|XP_002264027.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
            [Vitis vinifera]
          Length = 684

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 28/50 (56%), Positives = 40/50 (80%)
 Frame = +1

Query: 859  SISPKRYSYSQLKKITSNFSSKIGEGGFGILYKGIIQRNQVEVPVAVKIL 1008
            ++ P RYSYS LKK+T+NF +K+G+GGFG +YKGI+Q  ++   VAVK+L
Sbjct: 348  NLQPIRYSYSHLKKVTNNFKNKLGQGGFGSVYKGILQSGRI---VAVKVL 394


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