BLASTX nr result

ID: Coptis24_contig00003000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003000
         (1475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274653.2| PREDICTED: uncharacterized protein LOC100256...    89   3e-15
emb|CAN68937.1| hypothetical protein VITISV_015472 [Vitis vinifera]    74   1e-10
gb|ADN33923.1| DNAJ heat shock N-terminal domain-containing prot...    62   5e-07
ref|XP_002313356.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-07

>ref|XP_002274653.2| PREDICTED: uncharacterized protein LOC100256902 [Vitis vinifera]
          Length = 1380

 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 92/357 (25%), Positives = 148/357 (41%), Gaps = 27/357 (7%)
 Frame = +3

Query: 447  SGG--VFVFGTSNSSS----------VDMKLPYEMKNLNIGSNAAHTFVFGQSGSVDF-- 584
            SGG   FVFG + S+           +D     ++ N N+G  A+ +   G      F  
Sbjct: 142  SGGNESFVFGANRSNPNLNLNPGNEILDEMRKLKIANENVGGRASSSVSEGLVDGSGFDE 201

Query: 585  ----KLPHQMKNLNIG--------DTTGNVEFKAKGSDERRSVFRKNKNETSSFGVGESS 728
                +LP++M+ LNI         + + N    +  +D+ R  F++  N   S G     
Sbjct: 202  SLASELPNEMRKLNIEAAVNRECFEKSNNSNIDSSVTDKTRFTFQRGDNVGGSLGRSLGF 261

Query: 729  LLPGELRKLNIGDTGSVG-NVKDAGYVKFKAKGSEKKSFVLRKNRNDAGSFGASESSVLP 905
                EL+K N  + G+V  N+ DA              FV   +R    SF  S SS L 
Sbjct: 262  QRSNELKKSNKSEDGNVAINLIDAN------------KFVFGSSRKGIDSFMGSSSSTLH 309

Query: 906  NEMKKLNIDDLKGGDKVEESNDGYDKVNGTNVFGFGSDKKETGSFSSSAVNMLPDEMNKL 1085
            ++MK LNI++    + VE+     + +N  N F FGS     G FS  A N L D+M K+
Sbjct: 310  DQMKNLNIEESVNTNVVEKEEADNETIN-KNSFLFGSTGSARGYFSGIAENSLADDMRKM 368

Query: 1086 NVGSKSGDSNAFADTASTSSFDAQANKSTQRVSNDPGIGNTMHGSFSFQAAKPSRSSSVG 1265
             + +  GD++   +T              ++  N   +GN++   F+FQA    ++ S G
Sbjct: 369  KIRNGVGDTSGQTNTEKLGG---------EKFHN---VGNSIPTKFTFQAVTSVKNLS-G 415

Query: 1266 SDHPLQPNDDXXXXXXXXXXXXFHTAGVSFQSSGTAFEESTADSAVNTVDSAVNKAE 1436
            S  PL  ++D            F +  +  Q+    F+  + D + +   S  NK E
Sbjct: 416  SQGPLDQSNDDIKMKGKPGTFSFSSHDIHLQAYENTFQAPSMDKSEDRF-SFANKLE 471


>emb|CAN68937.1| hypothetical protein VITISV_015472 [Vitis vinifera]
          Length = 1237

 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 73/260 (28%), Positives = 111/260 (42%), Gaps = 33/260 (12%)
 Frame = +3

Query: 447  SGG--VFVFGTSNSSS----------VDMKLPYEMKNLNIGSNAAHTFVFGQSGSVDF-- 584
            SGG   FVFG + S+           +D     ++ N N+G  A+ +   G      F  
Sbjct: 142  SGGNESFVFGANRSNPNLNLNPGNEILDEMRKLKIANENVGGRASSSVSEGLVDGSGFDE 201

Query: 585  ----KLPHQMKNLNIG--------DTTGNVEFKAKGSDERRSVFRKNKNETSSFGVGESS 728
                +LP++M+ LNI         + + N    +  +D+ R  F++  N   S G     
Sbjct: 202  SLASELPNEMRKLNIEAAVNRECFEKSNNSNIDSSVTDKTRFTFQRGDNVGGSLGRSLGF 261

Query: 729  LLPGELRKLNIGDTGSVG-NVKDAGYVKFKAKGSEKKSFVLRKNRNDAGSFGASESSVLP 905
                EL+K N  + G+V  N+ DA              FV   +R    SF  S SS L 
Sbjct: 262  QRSNELKKSNKSEDGNVAINLIDAN------------KFVFGSSRKGIDSFMGSSSSTLH 309

Query: 906  NEMKKLNIDDLKGGDKVEESNDGYDKVNGTNVFGFGSDKKETGSFSSSAVNMLPDEMNKL 1085
            ++MK LNI++    + VE+     + +N  N F FGS     G FS  A N L D+M K+
Sbjct: 310  DQMKNLNIEESVNTNVVEKEEADNETIN-KNSFLFGSTGSARGYFSGIAENSLADDMRKM 368

Query: 1086 NVGS------KSGDSNAFAD 1127
             + +      KS D  +FA+
Sbjct: 369  KIRNGAPSMDKSEDRXSFAN 388


>gb|ADN33923.1| DNAJ heat shock N-terminal domain-containing protein [Cucumis melo
            subsp. melo]
          Length = 1337

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 74/287 (25%), Positives = 117/287 (40%), Gaps = 39/287 (13%)
 Frame = +3

Query: 447  SGGV----FVFG---TSNSSSVDM---KLPYEMKNLNI-------------------GSN 539
            SGG+    FVFG   ++ SS+++M   ++   MK LNI                    S 
Sbjct: 84   SGGIGNQPFVFGENRSTTSSNLEMSEREVFDGMKKLNIESVDEVGIARDGKFVFKGGNSR 143

Query: 540  AAHTFVFGQSG--SVDFKLPHQMKNLNIGDTTGNVEFKAKGSDERRSVFRKNKNETSSFG 713
             + T VF + G  +++ KLP  M+ LNI +  GN     K  +E     R   NE +  G
Sbjct: 144  TSKTDVFDKGGKEAIESKLPDDMRKLNIEEGQGNAVPVEKTRNESS---RLRSNEQAKVG 200

Query: 714  VGESSL-------LPGELRKLNIGDTGSVGNVKDAGYVKFKAKGSEKKSFVLRKNRNDAG 872
            +  S++       LP +L  LNI D+G  G     G   FKA G +   F L K +    
Sbjct: 201  LWNSNIDNPMVSELPNKLEHLNIEDSGHRG----IGSAAFKADGVD--MFGLDKGKGVTN 254

Query: 873  SFGASESSVLPNEMKKLNIDDLKGGDKVEESNDGYDKVNGTNVFGFGSDKKET-GSFSSS 1049
                S +  LP ++K LNI D      +            T+   F S++ +T G+F   
Sbjct: 255  FAIGSSADSLPEKIKGLNIKDTSNSTNI-----------NTHKEKFVSERTQTSGNFVEQ 303

Query: 1050 AVNMLPDEMNKLNVGSKSGDSNAFADTASTSSFDAQANKSTQRVSND 1190
                L  +M ++ +  ++  S    +T    +F        Q ++ D
Sbjct: 304  KDTFLSRKMEEMKLDKRTPSSGGITETTEMQNFSYLDRNPNQPLATD 350


>ref|XP_002313356.1| predicted protein [Populus trichocarpa] gi|222849764|gb|EEE87311.1|
            predicted protein [Populus trichocarpa]
          Length = 1026

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 70/229 (30%), Positives = 101/229 (44%), Gaps = 16/229 (6%)
 Frame = +3

Query: 531  GSNAAHTFVFGQSGS-VDFK------LPHQMKNLNIGDTTGNVEFKAKGSDERRSVFRKN 689
            GS     F+FG SGS V F       +   +K+L IG  T   E     +D+   VF  +
Sbjct: 89   GSGGNEAFLFGASGSNVGFNSDSSKGIIEDLKSLRIGGGTNVNE-----NDKSGFVFSSD 143

Query: 690  KNETSSFGVGESSLLPGELRKLNIGDTGSVGNVKDAGYVKFKAKGSEKKSFVLRKNRNDA 869
             N+  SFGV ES      ++KL+I D   V        V  ++K S    F      N  
Sbjct: 144  GNK--SFGVDES------MQKLSIDDKEKV--------VDGESKLSANARF--ESGDNVG 185

Query: 870  GSFGASESSVLPNEM-KKLNIDDLKGGDKVEESNDGYDKVNGTNVFGFGSDKKETGSFSS 1046
            GS G +  SVL +E+ KKLNI++   GD    +  G  +      FG  S +K +  F+ 
Sbjct: 186  GSIGRNVGSVLSDELEKKLNIEE--AGDAT--NGGGSFRAEDIKKFGLKSSEKRSDIFAD 241

Query: 1047 SAVNMLPDEMNKLNVG--------SKSGDSNAFADTASTSSFDAQANKS 1169
            ++ N LPD + KL++         +   DS AF    ST  +    N+S
Sbjct: 242  ASENALPDRIKKLSIRDFVDTYNVNNEKDSFAFGSRESTGGYVGGENES 290


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