BLASTX nr result
ID: Coptis24_contig00002997
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00002997
(2080 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002315377.1| predicted protein [Populus trichocarpa] gi|2... 585 e-164
ref|XP_002311905.1| predicted protein [Populus trichocarpa] gi|2... 570 e-160
emb|CAN68359.1| hypothetical protein VITISV_029196 [Vitis vinifera] 568 e-159
ref|XP_002264976.1| PREDICTED: F-box/kelch-repeat protein At1g51... 564 e-158
ref|XP_002518834.1| ubiquitin-protein ligase, putative [Ricinus ... 554 e-155
>ref|XP_002315377.1| predicted protein [Populus trichocarpa] gi|222864417|gb|EEF01548.1|
predicted protein [Populus trichocarpa]
Length = 469
Score = 585 bits (1509), Expect = e-164
Identities = 279/443 (62%), Positives = 340/443 (76%)
Frame = +1
Query: 337 DHLFSILLLLPVDSVLSFSMTCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSS 516
DHLF+ILLLLP+DS++SF+ TCKRF+SL S+TLW+SICRR+WG +VDA+ S ++
Sbjct: 25 DHLFTILLLLPIDSLISFARTCKRFRSLTSSDTLWESICRREWGS--TSVDALKSSINTK 82
Query: 517 QDMRHQQLSWRKLYQKISQLGSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGY 696
+ QQL W +LY+++SQL SV+C +L+ D L+LPTPRASHCLNFVSDCLVLFGGG
Sbjct: 83 NN---QQLPWMRLYKQVSQLDSVSCHKLSDPDSELMLPTPRASHCLNFVSDCLVLFGGGC 139
Query: 697 EGGRHLDDAWVAYIGNEFRMVPRWQKINSGTPSGRFGHSCAVVGETLVLFGGINDHGIRQ 876
EGGR LDD WVAYIGN+F+ + +WQK+NSG P+GRFGH+C V+G+ LVLFGGIND GIRQ
Sbjct: 140 EGGRDLDDTWVAYIGNDFQRMLKWQKVNSGIPNGRFGHACIVIGDYLVLFGGINDRGIRQ 199
Query: 877 NDTWLGHVLRDEIFGIELSWMLLHVGSVAPPPRGAHAGCCVNDKRMIIHGGIGLDGHRLN 1056
NDTW+G V+ E GI LSW LL V S+APPPRGAHA CC++ M+IHGGIGL G R+
Sbjct: 200 NDTWVGKVVLSENLGITLSWRLLDVRSIAPPPRGAHAACCIDKSTMVIHGGIGLYGLRMG 259
Query: 1057 DTWLFDLSEGLESTTWSQIITYLSPPARSGHTLTCIGSTRMVLFGGRGVGYEVLNDVWLL 1236
DTW+ +LSE S TW +++T+ SPPARSGHTLTCI T +VLFGGRG GY+VL+DVWLL
Sbjct: 260 DTWILELSENFCSGTWRELVTHPSPPARSGHTLTCIEGTGIVLFGGRGSGYDVLHDVWLL 319
Query: 1237 DIREEYAEWIQLLYNLPSIPRGVPPPRVGHSATXXXXXXXXXXXXEDSYRRRKNDFWVLD 1416
+ E +WIQ+LYNL IP GV PRVGHSAT EDS R RK+DFWVLD
Sbjct: 320 QVSEVELKWIQILYNLQDIPAGVSLPRVGHSATLILGGRLLIYGGEDSQRHRKDDFWVLD 379
Query: 1417 VNAIPSERMRSDTVDTQLLSKKMWKRLKAKGHQPDCRSFHRACADHSGCYVYVFGGMVDG 1596
V+ IPS + +S L + MWK LKAKG++P RSFHRACADHSGC +YVFGGMVDG
Sbjct: 380 VSKIPSNKAQSPLNSRGLQANNMWKMLKAKGYKPYRRSFHRACADHSGCRLYVFGGMVDG 439
Query: 1597 ILRPGEVIGLRFDGELFLVELGL 1665
+L+P E GLRFDGELFLV+L L
Sbjct: 440 LLQPAEAYGLRFDGELFLVKLEL 462
>ref|XP_002311905.1| predicted protein [Populus trichocarpa] gi|222851725|gb|EEE89272.1|
predicted protein [Populus trichocarpa]
Length = 475
Score = 570 bits (1469), Expect = e-160
Identities = 274/444 (61%), Positives = 337/444 (75%), Gaps = 1/444 (0%)
Frame = +1
Query: 337 DHLFSILLLLPVDSVLSFSMTCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSS 516
DHLF+I+LLLPVDS++SF+MTCKRF+SL S+TLW+SICRR+WG +VDA S +++
Sbjct: 30 DHLFTIMLLLPVDSLISFAMTCKRFRSLTTSDTLWESICRREWGS--TSVDAFKSSINTN 87
Query: 517 QDMRHQQLSWRKLYQKISQLGSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGY 696
+ QQL W +LY+++SQL S +C +L D +L+LPTPRASH LNFVSDCLVLFGGG
Sbjct: 88 NN---QQLPWMRLYKQVSQLDSFSCHKLPDPDSDLMLPTPRASHSLNFVSDCLVLFGGGR 144
Query: 697 EGGRHLDDAWVAYIGNEFRMVPRWQKINSGTPSGRFGHSCAVVGETLVLFGGINDHGIRQ 876
EGGR LDD WVAYIG +F+ + +WQK+ SG PSGRFGH+CAV+GE LVLFGGIND G+RQ
Sbjct: 145 EGGRDLDDTWVAYIGKDFQRMLKWQKVTSGIPSGRFGHTCAVIGENLVLFGGINDRGMRQ 204
Query: 877 NDTWLGHVLRDEIFGIE-LSWMLLHVGSVAPPPRGAHAGCCVNDKRMIIHGGIGLDGHRL 1053
NDTW+G V+ E GI LSW LL V SVAPPPRGAHA CC++ + M+IHGGIGL G RL
Sbjct: 205 NDTWVGQVVLGENLGITTLSWRLLDVSSVAPPPRGAHAACCIDKRTMVIHGGIGLYGLRL 264
Query: 1054 NDTWLFDLSEGLESTTWSQIITYLSPPARSGHTLTCIGSTRMVLFGGRGVGYEVLNDVWL 1233
DTW+ +LSE S TW +++ + SPP RSGHTLTCI T VLFGGRG+GY+VL+DVWL
Sbjct: 265 GDTWILELSENFCSGTWIELVAHPSPPPRSGHTLTCIEGTGTVLFGGRGLGYDVLHDVWL 324
Query: 1234 LDIREEYAEWIQLLYNLPSIPRGVPPPRVGHSATXXXXXXXXXXXXEDSYRRRKNDFWVL 1413
L E+ +W+Q+LYNL IP GV PRVGHSAT EDS R RK DFWVL
Sbjct: 325 LQASEDQLKWVQMLYNLQDIPEGVSLPRVGHSATLILGGRLLIYGGEDSQRHRKGDFWVL 384
Query: 1414 DVNAIPSERMRSDTVDTQLLSKKMWKRLKAKGHQPDCRSFHRACADHSGCYVYVFGGMVD 1593
DV+ IPS + +S ++++ L MW+RLKAKG++P+CRSFHRACADHSG +YVFGGMVD
Sbjct: 385 DVSKIPSIKEQSTPLNSRGLQANMWRRLKAKGYKPNCRSFHRACADHSGRRLYVFGGMVD 444
Query: 1594 GILRPGEVIGLRFDGELFLVELGL 1665
+L P E LRFDGELFLV+ L
Sbjct: 445 SLLHPAEASELRFDGELFLVKFEL 468
>emb|CAN68359.1| hypothetical protein VITISV_029196 [Vitis vinifera]
Length = 473
Score = 568 bits (1464), Expect = e-159
Identities = 269/444 (60%), Positives = 333/444 (75%), Gaps = 1/444 (0%)
Frame = +1
Query: 337 DHLFSILLLLPVDSVLSFSMTCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSS 516
DH+FSILLLLP DS++SFSMTC RF+SL +SE+LW++ICRRDWG VDA+ S ++
Sbjct: 32 DHIFSILLLLPTDSIISFSMTCSRFRSLTFSESLWEAICRRDWGP--TTVDALKFSAEAT 89
Query: 517 QDMRHQQLSWRKLYQKISQLGSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGY 696
QQLSW +LY+++ QL SV+C RL+ D ++LP PRASH LNFVSDCLVLFGGG
Sbjct: 90 NCQ--QQLSWMRLYKQVCQLDSVSCHRLSGPDAGMVLPKPRASHSLNFVSDCLVLFGGGS 147
Query: 697 EGGRHLDDAWVAYIGNEFRMVPRWQKINSGTPSGRFGHSCAVVGETLVLFGGINDHGIRQ 876
EGGRH+DD WVAYIGN+FR + RW+KI SG PSGRFGH+C V+G LVLFGGIND GIR
Sbjct: 148 EGGRHIDDTWVAYIGNDFRRMLRWEKITSGIPSGRFGHTCVVIGNHLVLFGGINDDGIRH 207
Query: 877 NDTWLGHVLRDEIFGIELSWMLLHVGSVAPPPRGAHAGCCVNDKRMIIHGGIGLDGHRLN 1056
NDTW+G V +E G +SW LL VGSVAPPPRGAHAGCC+ + RM+IHGGIGL G RL
Sbjct: 208 NDTWVGQVAPNETLGFTVSWRLLDVGSVAPPPRGAHAGCCIGNNRMVIHGGIGLYGLRLG 267
Query: 1057 DTWLFDLSEGLESTTWSQIITYLSPPARSGHTLTCIGSTRMVLFGGRGVGYEVLNDVWLL 1236
DTW+ DLSE L TW +++T+ SPPARSGHTLTCIG +R VLFGGRG+ Y VLND+WL
Sbjct: 268 DTWMLDLSENLCFGTWHEVVTHPSPPARSGHTLTCIGGSRTVLFGGRGLSYNVLNDLWLF 327
Query: 1237 DIREEYAEWIQLLYNLPSIPRGVPPPRVGHSATXXXXXXXXXXXXEDSYRRRKNDFWVLD 1416
+ E Y++W+Q+LY L ++P G+ PRVGHSAT EDS R RK+DFWVLD
Sbjct: 328 EFSEVYSKWVQILYELKNVPGGISLPRVGHSATLILGGRVLIYGGEDSQRHRKDDFWVLD 387
Query: 1417 VNAIPS-ERMRSDTVDTQLLSKKMWKRLKAKGHQPDCRSFHRACADHSGCYVYVFGGMVD 1593
AI S + ++++ L +WKRL A+G++P+CRSFH AC D SG +++VFGGMVD
Sbjct: 388 TGAITSVNPINPIPLNSRGLLVNIWKRLNAEGYKPECRSFHGACTDRSGRFLFVFGGMVD 447
Query: 1594 GILRPGEVIGLRFDGELFLVELGL 1665
G++RP E G+RFD ELFL EL L
Sbjct: 448 GLIRPAEPAGMRFDAELFLAELVL 471
>ref|XP_002264976.1| PREDICTED: F-box/kelch-repeat protein At1g51550 [Vitis vinifera]
gi|297735772|emb|CBI18459.3| unnamed protein product
[Vitis vinifera]
Length = 473
Score = 564 bits (1453), Expect = e-158
Identities = 268/444 (60%), Positives = 332/444 (74%), Gaps = 1/444 (0%)
Frame = +1
Query: 337 DHLFSILLLLPVDSVLSFSMTCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSS 516
DH+FSILLLLP DS++SFSMTC RF+SL +SE+LW++ICRRDWG VDA+ S ++
Sbjct: 32 DHIFSILLLLPTDSIISFSMTCSRFRSLTFSESLWEAICRRDWGP--TTVDALKFSAEAT 89
Query: 517 QDMRHQQLSWRKLYQKISQLGSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGY 696
QQLSW +LY+++ QL SV+C RL+ D ++LP PRAS LNFVSDCLVLFGGG
Sbjct: 90 NCQ--QQLSWMRLYKQVCQLDSVSCHRLSGPDAGMVLPKPRASLSLNFVSDCLVLFGGGS 147
Query: 697 EGGRHLDDAWVAYIGNEFRMVPRWQKINSGTPSGRFGHSCAVVGETLVLFGGINDHGIRQ 876
EGGRH+DD WVAYIGN+FR + RW+KI SG PSGRFGH+C V+G LVLFGGIND GIR
Sbjct: 148 EGGRHIDDTWVAYIGNDFRRMLRWEKITSGIPSGRFGHTCVVIGNHLVLFGGINDDGIRH 207
Query: 877 NDTWLGHVLRDEIFGIELSWMLLHVGSVAPPPRGAHAGCCVNDKRMIIHGGIGLDGHRLN 1056
NDTW+G V +E G +SW LL VGSVAPPPRGAHAGCC+ + RM+IHGGIGL G RL
Sbjct: 208 NDTWVGQVALNETLGFTVSWRLLDVGSVAPPPRGAHAGCCIGNNRMVIHGGIGLYGLRLG 267
Query: 1057 DTWLFDLSEGLESTTWSQIITYLSPPARSGHTLTCIGSTRMVLFGGRGVGYEVLNDVWLL 1236
DTW+ DLSE L TW +++T+ SPPARSGHTLTCIG +R VLFGGRG+ Y VLND+WL
Sbjct: 268 DTWMLDLSENLCFGTWHEVVTHPSPPARSGHTLTCIGGSRTVLFGGRGLSYNVLNDLWLF 327
Query: 1237 DIREEYAEWIQLLYNLPSIPRGVPPPRVGHSATXXXXXXXXXXXXEDSYRRRKNDFWVLD 1416
+ E Y++W+Q+LY L ++P G+ PRVGHSAT EDS R RK+DFWVLD
Sbjct: 328 EFSEVYSKWVQILYELKNVPGGISLPRVGHSATLILGGRVLIYGGEDSQRHRKDDFWVLD 387
Query: 1417 VNAIPS-ERMRSDTVDTQLLSKKMWKRLKAKGHQPDCRSFHRACADHSGCYVYVFGGMVD 1593
AI S + ++++ L +WKRL A+G++P+CRSFH AC D SG +++VFGGMVD
Sbjct: 388 TGAITSVNPINPIPLNSRGLLVNIWKRLNAEGYKPECRSFHGACTDRSGRFLFVFGGMVD 447
Query: 1594 GILRPGEVIGLRFDGELFLVELGL 1665
G++RP E G+RFD ELFL EL L
Sbjct: 448 GLIRPAEPAGMRFDAELFLAELVL 471
>ref|XP_002518834.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223542007|gb|EEF43552.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 462
Score = 554 bits (1428), Expect = e-155
Identities = 263/442 (59%), Positives = 329/442 (74%)
Frame = +1
Query: 337 DHLFSILLLLPVDSVLSFSMTCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSS 516
DHLF+ILLLLP+DS+LSF MTCKRF SL S+ LW+SIC+RDWG +VDA+
Sbjct: 35 DHLFTILLLLPIDSILSFGMTCKRFTSLTSSDALWESICKRDWGP--TSVDAL------- 85
Query: 517 QDMRHQQLSWRKLYQKISQLGSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGY 696
++Q W +LY+++S L +++C +L+ D + LLP+PRASH LNF+SDCLVLFGGG
Sbjct: 86 ---KNQHFPWMRLYKQVSLLDTISCHKLSDPDTDSLLPSPRASHSLNFISDCLVLFGGGC 142
Query: 697 EGGRHLDDAWVAYIGNEFRMVPRWQKINSGTPSGRFGHSCAVVGETLVLFGGINDHGIRQ 876
EGGRHLDD WVAYIGNEF +WQK++SG PSGRFGH+C V+G LVLFGGIND GIRQ
Sbjct: 143 EGGRHLDDTWVAYIGNEFPRTFKWQKVDSGVPSGRFGHTCVVIGHLLVLFGGINDRGIRQ 202
Query: 877 NDTWLGHVLRDEIFGIELSWMLLHVGSVAPPPRGAHAGCCVNDKRMIIHGGIGLDGHRLN 1056
NDTW+G ++ + I LSW LL V S+APP RGAHA CC++ ++M+I GGIGL+G RL
Sbjct: 203 NDTWIGQLIFSDNLCISLSWRLLSVQSLAPPSRGAHAACCIDQRKMVIQGGIGLNGLRLG 262
Query: 1057 DTWLFDLSEGLESTTWSQIITYLSPPARSGHTLTCIGSTRMVLFGGRGVGYEVLNDVWLL 1236
DTW+ +LSE L TW +++ + SPP RSGH+LTCIG +VLFGGRG+GYEVLNDVWLL
Sbjct: 263 DTWVLELSENLCFGTWHELVIHPSPPPRSGHSLTCIGEPGLVLFGGRGLGYEVLNDVWLL 322
Query: 1237 DIREEYAEWIQLLYNLPSIPRGVPPPRVGHSATXXXXXXXXXXXXEDSYRRRKNDFWVLD 1416
+ + +W+Q+LY L +IP GV PRVGHSAT EDSYR RK+DFW+LD
Sbjct: 323 QMSDGQLKWVQMLYELQNIPEGVSLPRVGHSATLTLGGRVLIYGGEDSYRHRKDDFWMLD 382
Query: 1417 VNAIPSERMRSDTVDTQLLSKKMWKRLKAKGHQPDCRSFHRACADHSGCYVYVFGGMVDG 1596
++++ S +M L MWKRLKAKG++P+ RSFHRAC DHSG Y+YVFGGMVDG
Sbjct: 383 ISSMISTQMLPTA-----LRANMWKRLKAKGYKPNRRSFHRACGDHSGRYLYVFGGMVDG 437
Query: 1597 ILRPGEVIGLRFDGELFLVELG 1662
+L+P E GLRFDGELFLVELG
Sbjct: 438 VLQPAEASGLRFDGELFLVELG 459