BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002996
         (1392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containin...   448   e-123
ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|2...   440   e-121
ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus ...   437   e-120
ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containin...   427   e-117
ref|XP_002892071.1| zinc finger family protein [Arabidopsis lyra...   417   e-114

>ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Vitis
            vinifera] gi|297745423|emb|CBI40503.3| unnamed protein
            product [Vitis vinifera]
          Length = 331

 Score =  448 bits (1153), Expect = e-123
 Identities = 219/313 (69%), Positives = 244/313 (77%), Gaps = 1/313 (0%)
 Frame = -2

Query: 1325 DSSEPQSSEQVCNFFRKPTKNKNIRKRTTXXXXXXXXXXDSVTINRNKKQPKPDNKLVFS 1146
            D+ E Q SE VCNFFRKPTKNKNIRKRT            +  +++ KK PKPDNKL FS
Sbjct: 14   DTGEKQQSEPVCNFFRKPTKNKNIRKRTHDEDENEDSKTGTSVLHQQKKPPKPDNKLYFS 73

Query: 1145 TGPIKKSDPXXXXXXXXXXXSIFQFESSSEIQVQNDSRATAISEIETDYTRDARAIRERM 966
            TG  +KS              IFQFESS EIQVQ+DSRATA  E ETD++RDARAIRER+
Sbjct: 74   TGSSRKST---MDEPNKESEPIFQFESSKEIQVQHDSRATATLETETDFSRDARAIRERV 130

Query: 965  LKQAENTLKGKG-GDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRASAHIRAST 789
            LKQ+++ LKGK   DEK+YKGIHGYTDYKAGFRREQT+ASEKAGG+HGPLRASAHIRAS 
Sbjct: 131  LKQSQDALKGKNKSDEKLYKGIHGYTDYKAGFRREQTVASEKAGGAHGPLRASAHIRASA 190

Query: 788  RFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAMGIMX 609
            RFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQME+EW+EAEK RKRNLAMG   
Sbjct: 191  RFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEKEWEEAEKARKRNLAMG--- 247

Query: 608  XXXXXXXXXXXXXXXXXEKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHSKNKRCFV 429
                             + LPFACFICR+ FVDPVVTKCKH+FCEHCAL+HHSKNK+CFV
Sbjct: 248  GDDADEGGGGQSDEDDDDALPFACFICRQPFVDPVVTKCKHFFCEHCALRHHSKNKKCFV 307

Query: 428  CNEPTLGIFNTAH 390
            CN+PTLG+FNTAH
Sbjct: 308  CNQPTLGMFNTAH 320


>ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|222861631|gb|EEE99173.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  440 bits (1132), Expect = e-121
 Identities = 214/312 (68%), Positives = 241/312 (77%), Gaps = 3/312 (0%)
 Frame = -2

Query: 1316 EPQSSEQVCNFFRKPTKNKNIRKRTTXXXXXXXXXXDSVTINRNKKQPKPDNKLVFSTGP 1137
            EPQ +E VCNFFRKP KNKNIRKR             +  ++  KK PK DNKL FSTGP
Sbjct: 8    EPQQTEAVCNFFRKPMKNKNIRKRMIDEDEDEDSKTQTSLLHSQKKAPKADNKLYFSTGP 67

Query: 1136 IKKSDPXXXXXXXXXXXSIFQFESSSEIQVQNDSRATAISEIETDYTRDARAIRERMLKQ 957
            +KKS              +FQFESS EIQVQ+DSRATA  E ET++++DARAIRER LKQ
Sbjct: 68   LKKSSESNAEPERL----LFQFESSKEIQVQHDSRATATLETETEFSKDARAIRERALKQ 123

Query: 956  AENTLKGK---GGDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRASAHIRASTR 786
            A++ LKGK    GDEK+YKGIHGYTD+KAGFRREQTI+SEKAGGSHGPLRASAHIR S R
Sbjct: 124  ADDALKGKKMSSGDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSAR 183

Query: 785  FDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAMGIMXX 606
            FDYQPDICKDYKETGYCG+GD+CKFMHDRGDYKSGWQME+EW+EAEK RKRNLA+G+   
Sbjct: 184  FDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQMEKEWEEAEKARKRNLALGM--- 240

Query: 605  XXXXXXXXXXXXXXXXEKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHSKNKRCFVC 426
                            ++LPFACFICRE FVDPV+TKCKHYFCEHCALKHH+KNK+CFVC
Sbjct: 241  -DDEEVGGAGHDDDDEDELPFACFICRENFVDPVMTKCKHYFCEHCALKHHAKNKKCFVC 299

Query: 425  NEPTLGIFNTAH 390
            NEPTLGIFN AH
Sbjct: 300  NEPTLGIFNAAH 311


>ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus communis]
            gi|223538607|gb|EEF40210.1| RING finger protein 113A,
            putative [Ricinus communis]
          Length = 325

 Score =  437 bits (1123), Expect = e-120
 Identities = 215/318 (67%), Positives = 240/318 (75%), Gaps = 4/318 (1%)
 Frame = -2

Query: 1331 MEDSSEPQSSEQVCNFFRKPTKNKNIRKRTTXXXXXXXXXXDSVTINRN-KKQPKPDNKL 1155
            M DS + +  E VCNFFRKP KNKNIRKRT              ++  N KK PKPDNKL
Sbjct: 1    MADSGQSEQPEPVCNFFRKPLKNKNIRKRTIEKDEEDDNSKTESSLLHNQKKAPKPDNKL 60

Query: 1154 VFSTGPIKKSDPXXXXXXXXXXXSIFQFESSSEIQVQNDSRATAISEIETDYTRDARAIR 975
             FSTGP K S              +FQFESS EIQVQ+DSRATA  E ET++++DARAIR
Sbjct: 61   YFSTGPSKNS-LSAAESVVESDRPVFQFESSKEIQVQHDSRATATLETETEFSKDARAIR 119

Query: 974  ERMLKQAENTLKGK---GGDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRASAH 804
            ER LKQAE  LKGK    GD K+YKGIHGYTD+KAGFRREQTI+SEKAGGSHGPLRASAH
Sbjct: 120  ERALKQAEEALKGKTLSSGDAKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAH 179

Query: 803  IRASTRFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLA 624
            IR S RFDYQPDICKDYKETGYCG+GD+CKFMHDRGDYKSGWQ+E+EWDEAEK+RKRNLA
Sbjct: 180  IRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEAEKIRKRNLA 239

Query: 623  MGIMXXXXXXXXXXXXXXXXXXEKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHSKN 444
            +G +                   +LPFACFICR+ FVDPV TKCKHYFCEHCALKHH+KN
Sbjct: 240  LGEL---EGGTGENEEEDDDDEHELPFACFICRQPFVDPVTTKCKHYFCEHCALKHHAKN 296

Query: 443  KRCFVCNEPTLGIFNTAH 390
            K+CFVCN+PTLGIFNTAH
Sbjct: 297  KKCFVCNQPTLGIFNTAH 314


>ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Cucumis
            sativus]
          Length = 322

 Score =  427 bits (1099), Expect = e-117
 Identities = 211/317 (66%), Positives = 237/317 (74%), Gaps = 3/317 (0%)
 Frame = -2

Query: 1331 MEDSSEPQSSEQVCNFFRKPTKNKNIRKRTTXXXXXXXXXXDSVTINRNKKQPKPDNKLV 1152
            M D+ + Q SEQVC+FFRKPTKNKNIRKRT           ++  +   KK PK ++KL 
Sbjct: 1    MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 1151 FSTGPIKKSDPXXXXXXXXXXXSIFQFESSSEIQVQNDSRATAISEIETDYTRDARAIRE 972
            FS+GP K S              IFQFESS EIQV +DSRATA  E ETD++RDARAIRE
Sbjct: 61   FSSGPSKNSSSNESNVEPNKP--IFQFESSKEIQVHHDSRATATLETETDFSRDARAIRE 118

Query: 971  RMLKQAENTLKGKG---GDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRASAHI 801
            R+LKQAE  LKGKG   G EK+YKG++ Y DYKAGFRRE TI+SEKAGG+HGPLRASAHI
Sbjct: 119  RVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHI 178

Query: 800  RASTRFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAM 621
            RAS RFDYQPDICKDYKETGYCG+GDACKFMHDRGDYKSGWQ+E+EW+E EK RKR LA 
Sbjct: 179  RASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLA- 237

Query: 620  GIMXXXXXXXXXXXXXXXXXXEKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHSKNK 441
              M                  + LPFACFICRE FVDPVVTKCKHYFCEHCALKHH+KNK
Sbjct: 238  --MKSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNK 295

Query: 440  RCFVCNEPTLGIFNTAH 390
            +CFVCN+PTLGIFNTAH
Sbjct: 296  KCFVCNQPTLGIFNTAH 312


>ref|XP_002892071.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297337913|gb|EFH68330.1| zinc finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score =  417 bits (1071), Expect = e-114
 Identities = 204/317 (64%), Positives = 235/317 (74%), Gaps = 4/317 (1%)
 Frame = -2

Query: 1328 EDSSEPQSSEQVCNFFRKPTKNKNIRKRTTXXXXXXXXXXDSVTINRN-KKQPKPDNKLV 1152
            + + E   S+QVC FF+KPTK+KNIRKR               +I +N KK  KPD+KL 
Sbjct: 18   QPAGEETKSQQVCTFFKKPTKSKNIRKRAIDADEEDGDSKSESSILQNLKKVAKPDSKLY 77

Query: 1151 FSTGPIKKSDPXXXXXXXXXXXSIFQFESSSEIQVQNDSRATAISEIETDYTRDARAIRE 972
            FS+GP K S              +F ++SS EIQVQNDSRATA  E ETD+ +DARAIRE
Sbjct: 78   FSSGPAKSSTTSEAAERP-----VFHYDSSKEIQVQNDSRATATLETETDFNQDARAIRE 132

Query: 971  RMLKQAENTLKG---KGGDEKVYKGIHGYTDYKAGFRREQTIASEKAGGSHGPLRASAHI 801
            R+LK+A+  LKG   K  DEK+YKGIHGYTD+KAGFRREQTI+SEKAGGSHGPLRASAHI
Sbjct: 133  RVLKKADEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHI 192

Query: 800  RASTRFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAM 621
            R S RFDYQPDICKDYKETGYCG+GD+CKF+HDRGDYK GWQ+E+EW+EAEKVRKRN AM
Sbjct: 193  RVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAM 252

Query: 620  GIMXXXXXXXXXXXXXXXXXXEKLPFACFICREAFVDPVVTKCKHYFCEHCALKHHSKNK 441
            G+                     LPFACFICRE FVDPVVTKCKHYFCEHCALKHH+KNK
Sbjct: 253  GV----EDEDDEADNDSDEDENALPFACFICREPFVDPVVTKCKHYFCEHCALKHHTKNK 308

Query: 440  RCFVCNEPTLGIFNTAH 390
            +CFVCN+PT+GIFN AH
Sbjct: 309  KCFVCNQPTMGIFNAAH 325