BLASTX nr result
ID: Coptis24_contig00002991
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002991 (1757 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245... 170 1e-39 emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera] 170 1e-39 ref|XP_002519325.1| DNA binding protein, putative [Ricinus commu... 165 3e-38 ref|XP_002315467.1| predicted protein [Populus trichocarpa] gi|2... 156 1e-35 ref|XP_002312763.1| predicted protein [Populus trichocarpa] gi|2... 154 9e-35 >ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245891 [Vitis vinifera] Length = 314 Score = 170 bits (431), Expect = 1e-39 Identities = 82/168 (48%), Positives = 117/168 (69%), Gaps = 10/168 (5%) Frame = -3 Query: 1584 TPSECSGCNLTERWLLHNVCMREVYRRLCTSCVLKLHSGSFCPICFQVYDSGPNNAPIER 1405 T EC GC+LT+RWLLH+V R +YRRLCTSCVLKLH G FCPICF+ YD P +P R Sbjct: 6 TTPECGGCSLTDRWLLHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDPPP--SPHLR 63 Query: 1404 VICLRCPSITHKECVTKDVINSYICPPCANPNFTFFDTSRSGKE----------IELSGS 1255 +C +CPSI+H+ CV +S++CPPC NP F+FFD +R+ K+ I+L+ + Sbjct: 64 SLCQKCPSISHQHCVASH-SDSFVCPPCLNPTFSFFDPARTPKDAQNPQSDRRYIDLNSA 122 Query: 1254 KVFLAAARIASVSMSRAAGLARVDAERKVREAMVSRKNAKEALEEVNA 1111 KV AARI+ ++M +AA +R ++ER+V+EA ++K A+E+L+ V + Sbjct: 123 KVVACAARISFLTMRKAAVASRGESERRVKEAAFAKKRARESLQHVES 170 >emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera] Length = 1076 Score = 170 bits (431), Expect = 1e-39 Identities = 82/168 (48%), Positives = 117/168 (69%), Gaps = 10/168 (5%) Frame = -3 Query: 1584 TPSECSGCNLTERWLLHNVCMREVYRRLCTSCVLKLHSGSFCPICFQVYDSGPNNAPIER 1405 T EC GC+LT+RWLLH+V R +YRRLCTSCVLKLH G FCPICF+ YD P +P R Sbjct: 768 TTPECGGCSLTDRWLLHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDPPP--SPHLR 825 Query: 1404 VICLRCPSITHKECVTKDVINSYICPPCANPNFTFFDTSRSGKE----------IELSGS 1255 +C +CPSI+H+ CV +S++CPPC NP F+FFD +R+ K+ I+L+ + Sbjct: 826 SLCQKCPSISHQHCVASH-SDSFVCPPCLNPTFSFFDPARTPKDAQNPQSDRRYIDLNSA 884 Query: 1254 KVFLAAARIASVSMSRAAGLARVDAERKVREAMVSRKNAKEALEEVNA 1111 KV AARI+ ++M +AA +R ++ER+V+EA ++K A+E+L+ V + Sbjct: 885 KVVACAARISFLTMRKAAVASRGESERRVKEAAFAKKRARESLQHVES 932 >ref|XP_002519325.1| DNA binding protein, putative [Ricinus communis] gi|223541640|gb|EEF43189.1| DNA binding protein, putative [Ricinus communis] Length = 186 Score = 165 bits (418), Expect = 3e-38 Identities = 79/157 (50%), Positives = 111/157 (70%), Gaps = 4/157 (2%) Frame = -3 Query: 1575 ECSGCNLTERWLLHNVCMREVYRRLCTSCVLKLHSGSFCPICFQVY--DSGPNNAPIERV 1402 +C GC RWLLHNV R YRRLCT+C+LK H G FCP CF VY DS AP ERV Sbjct: 6 QCGGCGGENRWLLHNVRHRAAYRRLCTNCILKTHQGLFCPFCFHVYDHDSLLVPAPEERV 65 Query: 1401 ICLRCPSITHKECVTK-DVINSYICPPCANPNFTFFDTSRSGK-EIELSGSKVFLAAARI 1228 +CL+CPSI+H C+ + ++CPPC++PNF+FF+ I++ ++ +AAA+I Sbjct: 66 MCLKCPSISHLSCLPPFHNTSPFLCPPCSSPNFSFFNLPHDDDVSIDIDSARALVAAAKI 125 Query: 1227 ASVSMSRAAGLARVDAERKVREAMVSRKNAKEALEEV 1117 A+VSM++AA LAR++AER+V+EA +++K A+EALE + Sbjct: 126 AAVSMAKAAALARLEAERRVKEATLAKKRAREALERL 162 >ref|XP_002315467.1| predicted protein [Populus trichocarpa] gi|222864507|gb|EEF01638.1| predicted protein [Populus trichocarpa] Length = 220 Score = 156 bits (395), Expect = 1e-35 Identities = 84/183 (45%), Positives = 120/183 (65%), Gaps = 9/183 (4%) Frame = -3 Query: 1593 KRDTPSECSGCNLTERWLLHNVCMREV-YRRLCTSCVLKLHSGSFCPICFQVYDSGPNNA 1417 +RD EC C +R+LLHNV R YRRLCT+C+LK H G FCP CF VY+ N Sbjct: 4 ERDHQFECGICGTQDRYLLHNVRHRTPSYRRLCTNCLLKDHRGLFCPFCFIVYEEPLQN- 62 Query: 1416 PIERVICLRCPSITHKECVTKDVINS--YICPPCANPNFTFFDTSR-----SGKEIELSG 1258 +R +C +CPSI HK C+ + + +ICP C++PNF+FF+ +R SG+ I+ Sbjct: 63 --DRSMCNKCPSIAHKPCIPSNYPHHTPFICPSCSSPNFSFFNPTRNGDSSSGRFIDKDS 120 Query: 1257 SKVFLAAARIASVSMSRAAGLARVDAERKVREAMVSRKNAKEALEEVNAIVL-GNEKSEK 1081 ++ +AAA+IAS+SM++AA LARV+AE++V+EA ++K A+EALE + + NE E Sbjct: 121 ARALVAAAKIASISMTKAAALARVEAEKRVKEATYAKKRAREALERLAYLAAKENEMMED 180 Query: 1080 IKG 1072 IKG Sbjct: 181 IKG 183 >ref|XP_002312763.1| predicted protein [Populus trichocarpa] gi|222852583|gb|EEE90130.1| predicted protein [Populus trichocarpa] Length = 207 Score = 154 bits (388), Expect = 9e-35 Identities = 81/183 (44%), Positives = 122/183 (66%), Gaps = 8/183 (4%) Frame = -3 Query: 1593 KRDTPSECSGCNLTERWLLHNVCMREV-YRRLCTSCVLKLHSGSFCPICFQVYDSGPNNA 1417 +RD EC C +R+LLHNV R YRRLCT+C+LK H G FCP CF VY+ Sbjct: 4 ERDHQFECGICGAEDRYLLHNVRHRTPSYRRLCTNCLLKDHRGLFCPFCFSVYEEP---L 60 Query: 1416 PIERVICLRCPSITHKECVTKDVINS--YICPPCANPNFTFFDT-----SRSGKEIELSG 1258 PI+R +C +CPSI+HK C+ + + +ICP C++PNF+FF+ S SG+ I+ Sbjct: 61 PIDRSMCNKCPSISHKPCIPSNYPHHTPFICPSCSSPNFSFFNPTTNGDSPSGRIIDRDS 120 Query: 1257 SKVFLAAARIASVSMSRAAGLARVDAERKVREAMVSRKNAKEALEEVNAIVLGNEKSEKI 1078 ++ +AAA+IA+VSM++AA +A+V+AE++V+EA ++K A+EALE + L ++ E + Sbjct: 121 ARALVAAAKIAAVSMTKAAAMAKVEAEKRVKEATYAKKRAREALERL--AYLAAKEKEIM 178 Query: 1077 KGK 1069 +GK Sbjct: 179 EGK 181