BLASTX nr result

ID: Coptis24_contig00002973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002973
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527153.1| serine/threonine-protein kinase cx32, putati...    86   1e-14
ref|XP_003631561.1| PREDICTED: probable serine/threonine-protein...    84   5e-14
ref|XP_002279800.2| PREDICTED: probable serine/threonine-protein...    84   5e-14
emb|CBI37741.3| unnamed protein product [Vitis vinifera]               84   5e-14
ref|XP_003572799.1| PREDICTED: protein kinase APK1A, chloroplast...    80   5e-13

>ref|XP_002527153.1| serine/threonine-protein kinase cx32, putative [Ricinus communis]
           gi|223533492|gb|EEF35235.1| serine/threonine-protein
           kinase cx32, putative [Ricinus communis]
          Length = 430

 Score = 85.9 bits (211), Expect(2) = 1e-14
 Identities = 48/103 (46%), Positives = 62/103 (60%), Gaps = 16/103 (15%)
 Frame = -3

Query: 288 TSKSISQYSTSGIEVELNS------------NGQLLPRPNLIIFSFEELKNAANNFGSDS 145
           +S+S +  S+ G  +  NS            NGQ+LP PNL +F+F+ELK A  NF SD+
Sbjct: 42  SSRSTNTASSQGSNISGNSRFSGGSGDEAFPNGQILPTPNLKVFTFQELKAATKNFRSDT 101

Query: 144 CIVWDCFGKVFKGWIDD----KPGSGYAIVVNKLNPESMQGLE 28
            +    FGKVFKGW+D+    KPGSG  I V KLN ES+QG E
Sbjct: 102 VLGEGGFGKVFKGWLDEKGSGKPGSGTVIAVKKLNSESLQGFE 144



 Score = 20.4 bits (41), Expect(2) = 1e-14
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -1

Query: 26  EWQSEVNF 3
           EWQSEV+F
Sbjct: 145 EWQSEVHF 152


>ref|XP_003631561.1| PREDICTED: probable serine/threonine-protein kinase Cx32,
           chloroplastic-like isoform 2 [Vitis vinifera]
          Length = 417

 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 48/86 (55%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
 Frame = -3

Query: 273 SQYST-SGIEVELNSNGQLLPRPNLIIFSFEELKNAANNFGSDSCIVWDCFGKVFKGWID 97
           SQ+S  SG   E   NGQ+LP PNL IF+F ELK A  NF  D+ +    FGKVFKGW+D
Sbjct: 46  SQFSAASGGSDEAFPNGQILPHPNLRIFTFSELKAATKNFRPDTVLGEGGFGKVFKGWLD 105

Query: 96  D---KPGSGYAIVVNKLNPESMQGLE 28
           +   K GSG  I V KLN ESMQG E
Sbjct: 106 EKVSKSGSGTVIAVKKLNSESMQGFE 131


>ref|XP_002279800.2| PREDICTED: probable serine/threonine-protein kinase Cx32,
           chloroplastic-like isoform 1 [Vitis vinifera]
          Length = 415

 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 48/86 (55%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
 Frame = -3

Query: 273 SQYST-SGIEVELNSNGQLLPRPNLIIFSFEELKNAANNFGSDSCIVWDCFGKVFKGWID 97
           SQ+S  SG   E   NGQ+LP PNL IF+F ELK A  NF  D+ +    FGKVFKGW+D
Sbjct: 44  SQFSAASGGSDEAFPNGQILPHPNLRIFTFSELKAATKNFRPDTVLGEGGFGKVFKGWLD 103

Query: 96  D---KPGSGYAIVVNKLNPESMQGLE 28
           +   K GSG  I V KLN ESMQG E
Sbjct: 104 EKVSKSGSGTVIAVKKLNSESMQGFE 129


>emb|CBI37741.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 48/86 (55%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
 Frame = -3

Query: 273 SQYST-SGIEVELNSNGQLLPRPNLIIFSFEELKNAANNFGSDSCIVWDCFGKVFKGWID 97
           SQ+S  SG   E   NGQ+LP PNL IF+F ELK A  NF  D+ +    FGKVFKGW+D
Sbjct: 44  SQFSAASGGSDEAFPNGQILPHPNLRIFTFSELKAATKNFRPDTVLGEGGFGKVFKGWLD 103

Query: 96  D---KPGSGYAIVVNKLNPESMQGLE 28
           +   K GSG  I V KLN ESMQG E
Sbjct: 104 EKVSKSGSGTVIAVKKLNSESMQGFE 129


>ref|XP_003572799.1| PREDICTED: protein kinase APK1A, chloroplastic-like [Brachypodium
           distachyon]
          Length = 448

 Score = 79.7 bits (195), Expect(2) = 5e-13
 Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
 Frame = -3

Query: 285 SKSISQYSTSGIEVELNSNGQLLPRPNLIIFSFEELKNAANNFGSDSCIVWDCFGKVFKG 106
           S S S+   +G E   ++ G++L  PNL IF+F ELK A  NF +D+ +    FG+VFKG
Sbjct: 60  SGSGSRRPVAGGEPSPSTEGRILETPNLRIFTFAELKAATRNFKADTLLGEGGFGRVFKG 119

Query: 105 WIDDK------PGSGYAIVVNKLNPESMQGLE 28
           W+D+K       GSG A+ V KLNPES+QGL+
Sbjct: 120 WVDEKTMSPARSGSGMAVAVKKLNPESLQGLQ 151



 Score = 21.2 bits (43), Expect(2) = 5e-13
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -1

Query: 26  EWQSEVNF 3
           EWQ+EVNF
Sbjct: 152 EWQTEVNF 159


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