BLASTX nr result

ID: Coptis24_contig00002970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002970
         (1634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19106.3| unnamed protein product [Vitis vinifera]              505   e-140
ref|XP_002284289.1| PREDICTED: alkylated DNA repair protein alkB...   503   e-140
ref|XP_002513858.1| S-adenosylmethionine-dependent methyltransfe...   488   e-135
ref|XP_002302272.1| predicted protein [Populus trichocarpa] gi|2...   471   e-130
ref|XP_003522817.1| PREDICTED: alkylated DNA repair protein alkB...   463   e-128

>emb|CBI19106.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  505 bits (1301), Expect = e-140
 Identities = 254/355 (71%), Positives = 294/355 (82%), Gaps = 5/355 (1%)
 Frame = -3

Query: 1536 QKKGCITMAEAASILPPCVSERLSLSMKVTTDQKC-YSSVQSTPEIEKKYVHHVYDAIAP 1360
            +++G + MA +   L          S+ V+ DQ C  S+VQSTPEIEKKYVHHVYDAIAP
Sbjct: 38   RREGKVDMASSLCTLVSDGESHTQPSLIVSQDQICPVSNVQSTPEIEKKYVHHVYDAIAP 97

Query: 1359 HFSSTRFAKWPKVSTFLNSLPEGSLVLDAGCGNGKYLGLNPDCFYVGCDISPSLINICAG 1180
            HFSSTRFAKWPKV+TFL SLP GSLVLDAGCGNGKYLGL+PDCF++GCDIS  LINICA 
Sbjct: 98   HFSSTRFAKWPKVATFLKSLPSGSLVLDAGCGNGKYLGLSPDCFFIGCDISAPLINICAD 157

Query: 1179 RGHEVLVADAVILPYRTAFGDAAISIAVLHHLSTESRRRKAIQELIRVVQKGGLVLITVW 1000
            R HEV+VADAV LPYRT FGDAAISIAVLHHLSTESRR+KAIQEL+RVV+KGGLVLITVW
Sbjct: 158  RDHEVVVADAVNLPYRTGFGDAAISIAVLHHLSTESRRKKAIQELVRVVKKGGLVLITVW 217

Query: 999  AVEQEDSALVTKWTPLTHK-LEEWVGPGSPRVRSPSTLTLQSIPETEDNCSGNRLKVIAE 823
            AVEQED +LVTKWTPL+ K +EEW+GP SPR+RSPS+ TL+SIPETE+N SG  LK + E
Sbjct: 218  AVEQEDRSLVTKWTPLSPKYVEEWIGPSSPRIRSPSSFTLESIPETEENGSGEHLKDLKE 277

Query: 822  QSEDKMEMDAHATSEMGSTSEASGTRSIKGN---QQEYFVPWHLPYHRAEITGHSACALA 652
             S + ++   H+T +   T + S T  IK N    QEYFVPWHLPYHRAE++G SACALA
Sbjct: 278  ISNENLQDTMHSTCQ---TEDDSMTFKIKKNIESHQEYFVPWHLPYHRAEVSGASACALA 334

Query: 651  NGLAKKDEKKGAVVYNRYYHVFMEGELERLVSGIENAVILDKFYDKSNWCIILKK 487
            NGLAKKD+KKGAVVYNRYYHVF EGELERLVSG++NAVI+D+F+DKSNWCIIL+K
Sbjct: 335  NGLAKKDDKKGAVVYNRYYHVFSEGELERLVSGMDNAVIVDQFFDKSNWCIILEK 389


>ref|XP_002284289.1| PREDICTED: alkylated DNA repair protein alkB homolog 8 [Vitis
            vinifera]
          Length = 347

 Score =  503 bits (1294), Expect = e-140
 Identities = 250/330 (75%), Positives = 285/330 (86%), Gaps = 5/330 (1%)
 Frame = -3

Query: 1461 SMKVTTDQKC-YSSVQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVSTFLNSLPEGSL 1285
            S+ V+ DQ C  S+VQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKV+TFL SLP GSL
Sbjct: 19   SLIVSQDQICPVSNVQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVATFLKSLPSGSL 78

Query: 1284 VLDAGCGNGKYLGLNPDCFYVGCDISPSLINICAGRGHEVLVADAVILPYRTAFGDAAIS 1105
            VLDAGCGNGKYLGL+PDCF++GCDIS  LINICA R HEV+VADAV LPYRT FGDAAIS
Sbjct: 79   VLDAGCGNGKYLGLSPDCFFIGCDISAPLINICADRDHEVVVADAVNLPYRTGFGDAAIS 138

Query: 1104 IAVLHHLSTESRRRKAIQELIRVVQKGGLVLITVWAVEQEDSALVTKWTPLTHK-LEEWV 928
            IAVLHHLSTESRR+KAIQEL+RVV+KGGLVLITVWAVEQED +LVTKWTPL+ K +EEW+
Sbjct: 139  IAVLHHLSTESRRKKAIQELVRVVKKGGLVLITVWAVEQEDRSLVTKWTPLSPKYVEEWI 198

Query: 927  GPGSPRVRSPSTLTLQSIPETEDNCSGNRLKVIAEQSEDKMEMDAHATSEMGSTSEASGT 748
            GP SPR+RSPS+ TL+SIPETE+N SG  LK + E S + ++   H+T +   T + S T
Sbjct: 199  GPSSPRIRSPSSFTLESIPETEENGSGEHLKDLKEISNENLQDTMHSTCQ---TEDDSMT 255

Query: 747  RSIKGN---QQEYFVPWHLPYHRAEITGHSACALANGLAKKDEKKGAVVYNRYYHVFMEG 577
              IK N    QEYFVPWHLPYHRAE++G SACALANGLAKKD+KKGAVVYNRYYHVF EG
Sbjct: 256  FKIKKNIESHQEYFVPWHLPYHRAEVSGASACALANGLAKKDDKKGAVVYNRYYHVFSEG 315

Query: 576  ELERLVSGIENAVILDKFYDKSNWCIILKK 487
            ELERLVSG++NAVI+D+F+DKSNWCIIL+K
Sbjct: 316  ELERLVSGMDNAVIVDQFFDKSNWCIILEK 345


>ref|XP_002513858.1| S-adenosylmethionine-dependent methyltransferase, putative [Ricinus
            communis] gi|223546944|gb|EEF48441.1|
            S-adenosylmethionine-dependent methyltransferase,
            putative [Ricinus communis]
          Length = 390

 Score =  488 bits (1256), Expect = e-135
 Identities = 236/331 (71%), Positives = 280/331 (84%), Gaps = 2/331 (0%)
 Frame = -3

Query: 1473 RLSLSMKVTTDQKCYSS-VQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVSTFLNSLP 1297
            ++ LS+     Q C SS VQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKV+TFLNSLP
Sbjct: 59   QIQLSLSADEKQVCSSSSVQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVATFLNSLP 118

Query: 1296 EGSLVLDAGCGNGKYLGLNPDCFYVGCDISPSLINICAGRGHEVLVADAVILPYRTAFGD 1117
             GSL+LDAGCGNGKYLGLNPDC+++GCDIS  LI ICA RGHEVLV DAV LPYRT F D
Sbjct: 119  SGSLILDAGCGNGKYLGLNPDCYFIGCDISAPLIKICADRGHEVLVGDAVNLPYRTGFSD 178

Query: 1116 AAISIAVLHHLSTESRRRKAIQELIRVVQKGGLVLITVWAVEQEDSALVTKWTPLTHK-L 940
            AAISIAVLHHLSTE+RR+KAI+EL+RVV+KGGLVLITVWAVEQED +LV KWTPL+ K +
Sbjct: 179  AAISIAVLHHLSTENRRKKAIEELVRVVKKGGLVLITVWAVEQEDGSLVAKWTPLSQKYV 238

Query: 939  EEWVGPGSPRVRSPSTLTLQSIPETEDNCSGNRLKVIAEQSEDKMEMDAHATSEMGSTSE 760
            EEW+GPGSPRVRSPS+ TL+SIPETE+N S   ++   + ++++      + S+    S 
Sbjct: 239  EEWIGPGSPRVRSPSSFTLESIPETEENNSKELIQDSEKNADEEFMKTMDSISQTEHNSV 298

Query: 759  ASGTRSIKGNQQEYFVPWHLPYHRAEITGHSACALANGLAKKDEKKGAVVYNRYYHVFME 580
                ++ K NQQEYFVPWHLPYHRAE++G SACALA+GLAKKD+KKGAVVYNRYYHVF E
Sbjct: 299  FKDEKNAK-NQQEYFVPWHLPYHRAEVSGASACALASGLAKKDDKKGAVVYNRYYHVFSE 357

Query: 579  GELERLVSGIENAVILDKFYDKSNWCIILKK 487
            GELERLV+G++NAV++D+F+DKSNWC+IL+K
Sbjct: 358  GELERLVTGMKNAVVVDRFFDKSNWCVILEK 388


>ref|XP_002302272.1| predicted protein [Populus trichocarpa] gi|222843998|gb|EEE81545.1|
            predicted protein [Populus trichocarpa]
          Length = 369

 Score =  471 bits (1212), Expect = e-130
 Identities = 235/333 (70%), Positives = 266/333 (79%), Gaps = 19/333 (5%)
 Frame = -3

Query: 1428 SSVQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVSTFLNSLPEGSLVLDAGCGNGKYL 1249
            SSVQSTPEIEK YVH VYDAIAPHFSSTRFAKWPKV+TFLNSLP GSLVLDAGCGNGKYL
Sbjct: 37   SSVQSTPEIEKNYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYL 96

Query: 1248 GLNPDCFYVGCDISPSLINICAGRGHEVLVADAVILPYRTAFGDAAISIAVLHHLSTESR 1069
            G NPDC +VGCDIS  LI ICA RGHEVLVADAV LPYRT FGDAAISIAVLHHLSTE+R
Sbjct: 97   GFNPDCTFVGCDISGPLIKICADRGHEVLVADAVNLPYRTGFGDAAISIAVLHHLSTENR 156

Query: 1068 RRKAIQELIRVVQKGGLVLITVWAVEQEDSALVTKWTPLTHK-LEEWVGPGSPRVRSPST 892
            R++AI EL+R V+KGGL+LITVWAVEQED +LVTKWTPL  K ++EW+GPGSPR+RSPS+
Sbjct: 157  RKRAIDELVRAVKKGGLILITVWAVEQEDRSLVTKWTPLNQKYVDEWIGPGSPRIRSPSS 216

Query: 891  LTLQSIPETEDNCSGNR--------------LKVIAEQSEDKMEMDAHATS----EMGST 766
            +TL+SIPETE+N   +               L+ I E   +  E +    S      G+ 
Sbjct: 217  ITLESIPETENNSKEHEKDTESLNHNPSPITLESIPETENNSKEHEKDTESLNHEFKGTM 276

Query: 765  SEASGTRSIKGNQQEYFVPWHLPYHRAEITGHSACALANGLAKKDEKKGAVVYNRYYHVF 586
               S   S   NQQEYFVPWHLPYHRAE++G SACAL NGLAKKD+KKGAVVYNRYYHVF
Sbjct: 277  PSTSKDDSSVQNQQEYFVPWHLPYHRAEVSGASACALENGLAKKDDKKGAVVYNRYYHVF 336

Query: 585  MEGELERLVSGIENAVILDKFYDKSNWCIILKK 487
             EGELERLVSG+ NAV++D+F+DKSNWCIIL+K
Sbjct: 337  SEGELERLVSGMNNAVVVDRFFDKSNWCIILQK 369


>ref|XP_003522817.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Glycine
            max]
          Length = 374

 Score =  463 bits (1191), Expect = e-128
 Identities = 236/355 (66%), Positives = 281/355 (79%), Gaps = 4/355 (1%)
 Frame = -3

Query: 1539 LQKKGCITMAEAASILP---PCVSERLSLSMKVTTDQKCYSSVQSTPEIEKKYVHHVYDA 1369
            +++  C   + + ++ P   PC+++ LS+S   TT     +SV+STPEIEKKYVHHVYDA
Sbjct: 37   MKEINCKVDSSSCTLAPNREPCITDSLSVSGNCTTSS---TSVKSTPEIEKKYVHHVYDA 93

Query: 1368 IAPHFSSTRFAKWPKVSTFLNSLPEGSLVLDAGCGNGKYLGLNPDCFYVGCDISPSLINI 1189
            IAPHFS+TRFAKWPKV+ FL+SLP GSLV DAGCGNGKYLGLN DCF++GCDISPSLI I
Sbjct: 94   IAPHFSATRFAKWPKVAAFLSSLPLGSLVFDAGCGNGKYLGLNQDCFFIGCDISPSLIKI 153

Query: 1188 CAGRGHEVLVADAVILPYRTAFGDAAISIAVLHHLSTESRRRKAIQELIRVVQKGGLVLI 1009
            C  R HEVLVADAV LPYRT FGD AISIAVLHHLSTE+RRRKAI+EL+RVV+KGGLVLI
Sbjct: 154  CLDREHEVLVADAVNLPYRTGFGDVAISIAVLHHLSTENRRRKAIEELVRVVKKGGLVLI 213

Query: 1008 TVWAVEQEDSALVTKWTPLTHK-LEEWVGPGSPRVRSPSTLTLQSIPETEDNCSGNRLKV 832
            TVWAVEQEDS L+TKWTPL  K ++EWVGPGSPR R+PS+ +L+SIPE+E + SG  ++V
Sbjct: 214  TVWAVEQEDSKLITKWTPLNEKYVDEWVGPGSPRTRAPSSSSLESIPESEVSRSGEHMEV 273

Query: 831  IAEQSEDKMEMDAHATSEMGSTSEASGTRSIKGNQQEYFVPWHLPYHRAEITGHSACALA 652
              E          H + ++         ++IK NQQEYFVPWHLPYHRAEI+G SA ALA
Sbjct: 274  CNE---------PHVSRDL------EEEKNIK-NQQEYFVPWHLPYHRAEISGASAEALA 317

Query: 651  NGLAKKDEKKGAVVYNRYYHVFMEGELERLVSGIENAVILDKFYDKSNWCIILKK 487
             GLA KD+KKGAVVYNRYYHVF EGELE L +GI NA I+D+F+DKSNWCIIL+K
Sbjct: 318  AGLATKDDKKGAVVYNRYYHVFSEGELESLTTGINNARIVDQFFDKSNWCIILEK 372


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