BLASTX nr result
ID: Coptis24_contig00002961
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002961 (1657 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g... 676 0.0 ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355... 676 0.0 ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g... 655 0.0 ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc... 655 0.0 ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi... 649 0.0 >ref|XP_002327176.1| f-box family protein [Populus trichocarpa] gi|222835491|gb|EEE73926.1| f-box family protein [Populus trichocarpa] Length = 534 Score = 676 bits (1744), Expect = 0.0 Identities = 329/467 (70%), Positives = 396/467 (84%) Frame = -2 Query: 1527 MGQSPSTSAPPGPITHLRRETNLNRSIKSRSPAAHIISPPPLQTFITITTNLENFDFISE 1348 MGQS ST+ + RR++N + S +S+S I P ++ T E D+IS+ Sbjct: 1 MGQSASTA-----LITSRRDSNRSSSHRSKSKFTVPIMPVQVEEQ-TEFIFCEGPDYISD 54 Query: 1347 LPDECLSIIFQSLNSGDRKKCSLVCTRWLRVEGQSRHRLSLDARSDLISYIPLLFTRFDS 1168 LPDECL+ IFQSLNSGDRK CSLVC RWLR+EGQSRHRLSL+A+SDL+ +P LF+RFDS Sbjct: 55 LPDECLACIFQSLNSGDRKHCSLVCRRWLRIEGQSRHRLSLNAQSDLLPLVPFLFSRFDS 114 Query: 1167 ISKLALKCDRKSVSIGDEALILISLKCRNLTRLKLRTCRDLSDLGVVAFSENCKGLRKLS 988 ++KLALKCDR+S SIGDEAL+ IS +CRNLTRLKLR+CR+L+D G+ AF++NCK L+KLS Sbjct: 115 VTKLALKCDRRSTSIGDEALVAISSRCRNLTRLKLRSCRELTDAGMAAFAKNCKALKKLS 174 Query: 987 VGSCNFGAKGMNGVINNCGMLEELSVKRLRGITEGAASDLIGPGVAAGSLKTICLKELYN 808 GSC FGA+GMN +++NC LEELS+KRLRGIT+GAA++ +GPG+AA SLKTICLKELYN Sbjct: 175 CGSCTFGARGMNAILDNCASLEELSLKRLRGITDGAAAEPVGPGLAAASLKTICLKELYN 234 Query: 807 GQCFGPLIVGAKNLKTLKLFRCSGDWDRLLEMFAENVRCLVEVHLERLQVSDRGLGAVSN 628 GQCFGPLI+G+KNLKTLKLFRCSGDWD+LL++ ++ V +VE+HLERLQVSD GL A+SN Sbjct: 235 GQCFGPLIIGSKNLKTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDTGLAAISN 294 Query: 627 CVGLEILHLVKTPECTNVGLVAIADRCKHLRKLHIDGWKTNRIGDEGLIAIARRCPNLQE 448 C+ LEILHLVKTPECT+ GLV+IA+RC+ LRKLH+DGWKTNRIGD+GL A+A+ CPNLQE Sbjct: 295 CLNLEILHLVKTPECTDTGLVSIAERCRLLRKLHVDGWKTNRIGDDGLSAVAKYCPNLQE 354 Query: 447 LVLIGVNPTSLSLGLLAANCQNLERLALCGSETIGDAEISCIAAKCRALRKLCIKGCPVS 268 LVLIGVNPT +S+ LLA+NCQNLERLALCGS+T+GDAEISCIAAKC AL+KLCIK CPVS Sbjct: 355 LVLIGVNPTKISVELLASNCQNLERLALCGSDTVGDAEISCIAAKCVALKKLCIKSCPVS 414 Query: 267 DHGMEALAGGCPSLVKVKVKKCRGVTSEGANWLRESRGSLAVNLDTG 127 DHGMEALA GCP+LVKVKVKKCR VT E A+WLR RGSLAVNLD G Sbjct: 415 DHGMEALANGCPNLVKVKVKKCRAVTCECADWLRTKRGSLAVNLDCG 461 >ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1| skip-2, putative [Ricinus communis] Length = 536 Score = 676 bits (1743), Expect = 0.0 Identities = 337/472 (71%), Positives = 402/472 (85%), Gaps = 5/472 (1%) Frame = -2 Query: 1527 MGQSPSTSAPPGPITHLRRETNLNRSIKSRSPAAHIISP-----PPLQTFITITTNLENF 1363 MGQS S++A L R ++ RS KS+S A +ISP P + + + N E+ Sbjct: 1 MGQSSSSTAI------LTRRESIYRS-KSKSTA--LISPMQTEEPNDKDDVVLIIN-ESP 50 Query: 1362 DFISELPDECLSIIFQSLNSGDRKKCSLVCTRWLRVEGQSRHRLSLDARSDLISYIPLLF 1183 D+IS+LPDECL+ IFQSL+ DR++CSLVC RWLR+EGQSRHRLSL A+SDL+ I LF Sbjct: 51 DYISDLPDECLACIFQSLSPSDRQRCSLVCRRWLRIEGQSRHRLSLHAQSDLLPVISALF 110 Query: 1182 TRFDSISKLALKCDRKSVSIGDEALILISLKCRNLTRLKLRTCRDLSDLGVVAFSENCKG 1003 TRFD+++KLAL+CDRKS SIGDEAL ISL+CRNLTRLKLR+CRD++D G+ AF++NCKG Sbjct: 111 TRFDAVTKLALRCDRKSASIGDEALEAISLRCRNLTRLKLRSCRDVTDAGMAAFAKNCKG 170 Query: 1002 LRKLSVGSCNFGAKGMNGVINNCGMLEELSVKRLRGITEGAASDLIGPGVAAGSLKTICL 823 L+KLS GSC FGAKGMN V++NC LEELS+KRLRGIT+GAA++ IGPG+AA SLKTICL Sbjct: 171 LKKLSCGSCTFGAKGMNAVLDNCASLEELSIKRLRGITDGAAAEPIGPGLAANSLKTICL 230 Query: 822 KELYNGQCFGPLIVGAKNLKTLKLFRCSGDWDRLLEMFAENVRCLVEVHLERLQVSDRGL 643 KELYNGQCFGPLI+G+KNL+TLKLFRCSGDWD+LL++ ++ V +VE+HLERLQVSD GL Sbjct: 231 KELYNGQCFGPLIIGSKNLRTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDVGL 290 Query: 642 GAVSNCVGLEILHLVKTPECTNVGLVAIADRCKHLRKLHIDGWKTNRIGDEGLIAIARRC 463 A+SNC+ LEILHLVKTPECTN+GL +IA+RCK LRKLHIDGWK NRIGD+GLIA+A+ C Sbjct: 291 SAISNCLDLEILHLVKTPECTNLGLGSIAERCKLLRKLHIDGWKANRIGDDGLIAVAKNC 350 Query: 462 PNLQELVLIGVNPTSLSLGLLAANCQNLERLALCGSETIGDAEISCIAAKCRALRKLCIK 283 PNLQELVLIGVNPT SL +LA+NCQNLERLALCGS+T+GDAEISCIAAKC +L+KLCIK Sbjct: 351 PNLQELVLIGVNPTKSSLEMLASNCQNLERLALCGSDTVGDAEISCIAAKCISLKKLCIK 410 Query: 282 GCPVSDHGMEALAGGCPSLVKVKVKKCRGVTSEGANWLRESRGSLAVNLDTG 127 CPVSDHGMEALA GCP+LVKVKVKKCRGVT EGA+WLR SRGSLAVNLD+G Sbjct: 411 SCPVSDHGMEALASGCPNLVKVKVKKCRGVTCEGADWLRASRGSLAVNLDSG 462 Score = 62.4 bits (150), Expect = 3e-07 Identities = 28/33 (84%), Positives = 31/33 (93%) Frame = -1 Query: 100 LVKVKVRKCRGVTCEGVNWLRESRGSLAVNLDT 2 LVKVKV+KCRGVTCEG +WLR SRGSLAVNLD+ Sbjct: 429 LVKVKVKKCRGVTCEGADWLRASRGSLAVNLDS 461 >ref|XP_002301165.1| f-box family protein [Populus trichocarpa] gi|222842891|gb|EEE80438.1| f-box family protein [Populus trichocarpa] Length = 533 Score = 655 bits (1690), Expect = 0.0 Identities = 323/467 (69%), Positives = 396/467 (84%) Frame = -2 Query: 1527 MGQSPSTSAPPGPITHLRRETNLNRSIKSRSPAAHIISPPPLQTFITITTNLENFDFISE 1348 MGQ+ ST+ + RR++NL+ S +S+S I P ++ T +E D+IS+ Sbjct: 1 MGQTTSTA-----LITSRRDSNLS-SQRSKSKFTVPIIPMQVEEQ-TEYVLVEAPDYISD 53 Query: 1347 LPDECLSIIFQSLNSGDRKKCSLVCTRWLRVEGQSRHRLSLDARSDLISYIPLLFTRFDS 1168 LPDECL+ IFQSL+SGDRK CSLVC RWLR+EGQSRHRLSL+A+SDL+ ++ LF+RFD+ Sbjct: 54 LPDECLACIFQSLSSGDRKSCSLVCRRWLRIEGQSRHRLSLNAQSDLLPFVTSLFSRFDA 113 Query: 1167 ISKLALKCDRKSVSIGDEALILISLKCRNLTRLKLRTCRDLSDLGVVAFSENCKGLRKLS 988 ++KLALKCDR+SVSIGDEAL+ IS++CRNLTRLKLR CR+++D G+ AF++NCK L+K S Sbjct: 114 VTKLALKCDRRSVSIGDEALVAISIRCRNLTRLKLRACREITDAGMAAFAKNCKALKKFS 173 Query: 987 VGSCNFGAKGMNGVINNCGMLEELSVKRLRGITEGAASDLIGPGVAAGSLKTICLKELYN 808 GSC FGAKGMN +++NC LE+LSVKRLRGIT+GA ++ IGPG+AA SLKTICLKELYN Sbjct: 174 CGSCAFGAKGMNAMLDNCASLEDLSVKRLRGITDGATAEPIGPGLAAASLKTICLKELYN 233 Query: 807 GQCFGPLIVGAKNLKTLKLFRCSGDWDRLLEMFAENVRCLVEVHLERLQVSDRGLGAVSN 628 GQCFGPLI+G+KNLKTLKLFRCSGDWD+LL++ A+ V +VE+HLERLQVSD GL A+SN Sbjct: 234 GQCFGPLIIGSKNLKTLKLFRCSGDWDKLLQVIADRVTGMVEIHLERLQVSDTGLVAISN 293 Query: 627 CVGLEILHLVKTPECTNVGLVAIADRCKHLRKLHIDGWKTNRIGDEGLIAIARRCPNLQE 448 C+ LEILHLVKTPECT++GLV+IA+RC+ LRKLHIDGWK +RIGD+GL+A+A+ C NLQE Sbjct: 294 CLNLEILHLVKTPECTDIGLVSIAERCRLLRKLHIDGWKAHRIGDDGLMAVAKYCLNLQE 353 Query: 447 LVLIGVNPTSLSLGLLAANCQNLERLALCGSETIGDAEISCIAAKCRALRKLCIKGCPVS 268 LVLIGVNPT +SL LLA+NCQNLERLALCGS+T+GD EISCIAAKC AL+KLCIK CPVS Sbjct: 354 LVLIGVNPTQISLELLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCPVS 413 Query: 267 DHGMEALAGGCPSLVKVKVKKCRGVTSEGANWLRESRGSLAVNLDTG 127 DHG+EALA GCP+LVKVKVKKCR VT E A+ LR RGSLAVNLD+G Sbjct: 414 DHGLEALANGCPNLVKVKVKKCRAVTYECADLLRMKRGSLAVNLDSG 460 >ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus] gi|449515093|ref|XP_004164584.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus] Length = 535 Score = 655 bits (1689), Expect = 0.0 Identities = 331/474 (69%), Positives = 391/474 (82%), Gaps = 1/474 (0%) Frame = -2 Query: 1527 MGQSPSTSAPPGPITHLRRETNLNRSIKSRSPAAHIISPPPLQTFITITTNLENF-DFIS 1351 MGQS S++A RR++N + K +S A +ISP L + + DFIS Sbjct: 1 MGQSASSAAILS-----RRDSNHSHRSKIKSTA--LISPMHLDETDDVQEIIHGASDFIS 53 Query: 1350 ELPDECLSIIFQSLNSGDRKKCSLVCTRWLRVEGQSRHRLSLDARSDLISYIPLLFTRFD 1171 +LPDECL+ IFQSL+S DRK CSLVC RW +VEGQSRHRLSL A +DL S IP LFTRFD Sbjct: 54 DLPDECLACIFQSLSSVDRKGCSLVCRRWFKVEGQSRHRLSLKAEADLSSMIPSLFTRFD 113 Query: 1170 SISKLALKCDRKSVSIGDEALILISLKCRNLTRLKLRTCRDLSDLGVVAFSENCKGLRKL 991 +++KLALKCDR+S SI D++LILISL+CRNLTRLKLR CR+L+D+G+ AF++NCKGL+KL Sbjct: 114 AVTKLALKCDRRSTSIRDDSLILISLRCRNLTRLKLRACRELTDVGMAAFAKNCKGLKKL 173 Query: 990 SVGSCNFGAKGMNGVINNCGMLEELSVKRLRGITEGAASDLIGPGVAAGSLKTICLKELY 811 S GSC FGAKGMN V++NC LEELSVKRLRGIT+ A IGPG+A SLKTICLK+LY Sbjct: 174 SCGSCTFGAKGMNAVLDNCSALEELSVKRLRGITDSTAEP-IGPGIAGSSLKTICLKDLY 232 Query: 810 NGQCFGPLIVGAKNLKTLKLFRCSGDWDRLLEMFAENVRCLVEVHLERLQVSDRGLGAVS 631 N QCFGPL++GAK+L+TLKLFRCSGDWD LL + A+ V LVEVHLERLQVSD GL A+S Sbjct: 233 NAQCFGPLLIGAKSLRTLKLFRCSGDWDALLRVIADRVTGLVEVHLERLQVSDVGLSAIS 292 Query: 630 NCVGLEILHLVKTPECTNVGLVAIADRCKHLRKLHIDGWKTNRIGDEGLIAIARRCPNLQ 451 NC+ LEILHLVKTPECTN+G+VA+A+RCK LRKLHIDGWK NRIGDEGL+A+AR C NLQ Sbjct: 293 NCLDLEILHLVKTPECTNLGIVALAERCKLLRKLHIDGWKANRIGDEGLVAVARNCSNLQ 352 Query: 450 ELVLIGVNPTSLSLGLLAANCQNLERLALCGSETIGDAEISCIAAKCRALRKLCIKGCPV 271 ELVLIGVNPT +SL +LA+NC+NLERLALCGS+T+GD+EISCIAAKC AL+KLCIK CPV Sbjct: 353 ELVLIGVNPTKVSLEILASNCRNLERLALCGSDTVGDSEISCIAAKCIALKKLCIKSCPV 412 Query: 270 SDHGMEALAGGCPSLVKVKVKKCRGVTSEGANWLRESRGSLAVNLDTGASDIPE 109 SD GMEALA GCP+LVKVKVKKCRGVT EGA+ LR SRGSLAVNLD+G + P+ Sbjct: 413 SDQGMEALAEGCPNLVKVKVKKCRGVTPEGADSLRLSRGSLAVNLDSGEPEHPD 466 >ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera] Length = 541 Score = 649 bits (1673), Expect = 0.0 Identities = 327/470 (69%), Positives = 384/470 (81%) Frame = -2 Query: 1527 MGQSPSTSAPPGPITHLRRETNLNRSIKSRSPAAHIISPPPLQTFITITTNLENFDFISE 1348 MGQS STSA I+ N +SRS + I ++ + E+ D+IS+ Sbjct: 1 MGQSASTSA----ISSGSSRRGSNHPHRSRSKSMVQIPSMQVEENVQFRQIDEDLDYISD 56 Query: 1347 LPDECLSIIFQSLNSGDRKKCSLVCTRWLRVEGQSRHRLSLDARSDLISYIPLLFTRFDS 1168 LPDECL+ IFQSL SGDRK+CSLVC RWLR+EGQ+RHRLSL+A SDL++ +P LF+RFD+ Sbjct: 57 LPDECLACIFQSLGSGDRKQCSLVCRRWLRIEGQTRHRLSLNAHSDLLTVVPSLFSRFDA 116 Query: 1167 ISKLALKCDRKSVSIGDEALILISLKCRNLTRLKLRTCRDLSDLGVVAFSENCKGLRKLS 988 ++KLALKCDR+SVSIGD+ALILISL CRNLTRLKLR CR+L+D G+ F++NCKGL+KLS Sbjct: 117 VTKLALKCDRRSVSIGDDALILISLGCRNLTRLKLRACRELTDAGMGVFAKNCKGLKKLS 176 Query: 987 VGSCNFGAKGMNGVINNCGMLEELSVKRLRGITEGAASDLIGPGVAAGSLKTICLKELYN 808 GSC FGAKGM+ V++NC LEELSVKRLRGI++G+A D IGPGVAA SLKTICLKE YN Sbjct: 177 CGSCTFGAKGMSAVLDNCSALEELSVKRLRGISDGSAVDQIGPGVAASSLKTICLKEQYN 236 Query: 807 GQCFGPLIVGAKNLKTLKLFRCSGDWDRLLEMFAENVRCLVEVHLERLQVSDRGLGAVSN 628 GQCF PLI+GAKNL+TLKLFRCSGD D LL++ A +VE+HLERLQVSD GL A+S+ Sbjct: 237 GQCFWPLIIGAKNLRTLKLFRCSGDCDNLLQLVANRTTSMVEIHLERLQVSDLGLVAISH 296 Query: 627 CVGLEILHLVKTPECTNVGLVAIADRCKHLRKLHIDGWKTNRIGDEGLIAIARRCPNLQE 448 + LEILHLVKT ECTN GLV++A+RCK LRKLHIDGWK NRIGDEGL A+A+ CPNLQE Sbjct: 297 FLDLEILHLVKTSECTNAGLVSVAERCKLLRKLHIDGWKANRIGDEGLSAVAKCCPNLQE 356 Query: 447 LVLIGVNPTSLSLGLLAANCQNLERLALCGSETIGDAEISCIAAKCRALRKLCIKGCPVS 268 LVLIGVNPT LSL +LAANCQNLERLALC S+T+GDAEISCIAAKC AL+KLCIK CPVS Sbjct: 357 LVLIGVNPTKLSLEMLAANCQNLERLALCASDTVGDAEISCIAAKCLALKKLCIKSCPVS 416 Query: 267 DHGMEALAGGCPSLVKVKVKKCRGVTSEGANWLRESRGSLAVNLDTGASD 118 D GM ALA GCP+LVKVKVKKCR VT EGA+ LR SR SLAVNLDTG ++ Sbjct: 417 DQGMRALACGCPNLVKVKVKKCRAVTYEGADGLRASRESLAVNLDTGETE 466