BLASTX nr result

ID: Coptis24_contig00002955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002955
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]        177   8e-65
ref|XP_002533868.1| protein with unknown function [Ricinus commu...   161   4e-59
ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|2...   156   4e-57
ref|XP_003617969.1| Protein DGCR14 [Medicago truncatula] gi|3555...   167   9e-57
ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis s...   156   9e-57

>ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]
          Length = 504

 Score =  177 bits (450), Expect(2) = 8e-65
 Identities = 82/108 (75%), Positives = 95/108 (87%)
 Frame = +2

Query: 2   GLTKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLED 181
           GLTKE+  TNTRFHGK +DSRPK+EDT+AV+YTP+ G T V  S +ERE +K++KYDLED
Sbjct: 259 GLTKEVNLTNTRFHGKLMDSRPKDEDTVAVLYTPIPGATPVPLSLSEREGDKSKKYDLED 318

Query: 182 MRKTPNLFYVEFGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPL 325
           +RKTPN FYVE  K+ADNGY+YVKTPSPAPGVDESPFITWGEIEGTPL
Sbjct: 319 LRKTPNPFYVESRKRADNGYSYVKTPSPAPGVDESPFITWGEIEGTPL 366



 Score = 94.7 bits (234), Expect(2) = 8e-65
 Identities = 48/61 (78%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
 Frame = +1

Query: 328 LRLEQEDTPVGIGGSR-GPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPA 504
           LRLE EDTP+GIGGS  GP F I  P  RD+KAHSLSREAARK RERSKMFQKPPLPSP 
Sbjct: 366 LRLEPEDTPIGIGGSGDGPHFKIPCPPSRDLKAHSLSREAARKLRERSKMFQKPPLPSPV 425

Query: 505 R 507
           R
Sbjct: 426 R 426


>ref|XP_002533868.1| protein with unknown function [Ricinus communis]
           gi|223526190|gb|EEF28518.1| protein with unknown
           function [Ricinus communis]
          Length = 519

 Score =  161 bits (407), Expect(2) = 4e-59
 Identities = 74/108 (68%), Positives = 91/108 (84%)
 Frame = +2

Query: 2   GLTKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLED 181
           GLTKEI R+NTRFHGK +DSRPK++ ++ V+YTPV GGT +    + R  +K +KYDLED
Sbjct: 276 GLTKEINRSNTRFHGKMLDSRPKDDGSVEVLYTPVVGGTPL--PVSGRHGDKAKKYDLED 333

Query: 182 MRKTPNLFYVEFGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPL 325
           +R+TPN FY+E GKKA+NGY +V+TPSPAPGVDESPFITWGEIEGTPL
Sbjct: 334 LRRTPNNFYMESGKKAENGYAFVRTPSPAPGVDESPFITWGEIEGTPL 381



 Score = 92.4 bits (228), Expect(2) = 4e-59
 Identities = 47/61 (77%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
 Frame = +1

Query: 328 LRLEQEDTPVGIGGSR-GPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPA 504
           LRLE EDTP+ IGGS  GP F I  P  RDVKAH+LSREAARK RERSKMFQKPPLPSP 
Sbjct: 381 LRLESEDTPIDIGGSGDGPHFKILNPPARDVKAHTLSREAARKLRERSKMFQKPPLPSPG 440

Query: 505 R 507
           R
Sbjct: 441 R 441


>ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|222843310|gb|EEE80857.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score =  156 bits (395), Expect(2) = 4e-57
 Identities = 70/108 (64%), Positives = 92/108 (85%)
 Frame = +2

Query: 2   GLTKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLED 181
           GLTKEI R++TRFHGK +D+RP+++  + V+YTPVAG T +     +R+ +K +KYDLED
Sbjct: 271 GLTKEINRSSTRFHGKMLDTRPRDDGVVEVLYTPVAGATPL--PMYDRDGDKAKKYDLED 328

Query: 182 MRKTPNLFYVEFGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPL 325
           +R+TP+ FYVE GKKAD+GY++V+TPSPAPGVDESPFITWGEIEGTP+
Sbjct: 329 LRRTPDRFYVESGKKADDGYSFVRTPSPAPGVDESPFITWGEIEGTPM 376



 Score = 90.1 bits (222), Expect(2) = 4e-57
 Identities = 44/61 (72%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
 Frame = +1

Query: 328 LRLEQEDTPVGIGGS-RGPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPA 504
           +RLE EDTP+ IGGS  GP F I  P  RDVKAHSLSREA+R+ RE+SKMFQKPPLPSP+
Sbjct: 376 MRLEPEDTPIDIGGSGNGPHFKIPNPPARDVKAHSLSREASRRLREKSKMFQKPPLPSPS 435

Query: 505 R 507
           R
Sbjct: 436 R 436


>ref|XP_003617969.1| Protein DGCR14 [Medicago truncatula] gi|355519304|gb|AET00928.1|
           Protein DGCR14 [Medicago truncatula]
          Length = 510

 Score =  167 bits (424), Expect(2) = 9e-57
 Identities = 79/106 (74%), Positives = 91/106 (85%)
 Frame = +2

Query: 8   TKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLEDMR 187
           TKEI R NTRFHGK +DSRPKE+ T+ ++YTPVAG T V  S+  R+A+K +KYDLED+R
Sbjct: 269 TKEIDRVNTRFHGKMMDSRPKEDGTVEMLYTPVAGATPVPMSF--RDADKLKKYDLEDLR 326

Query: 188 KTPNLFYVEFGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPL 325
           KTPN FY+E GKKADNGY+YVKTPSPAPG DESPFITWGEIEGTPL
Sbjct: 327 KTPNPFYLESGKKADNGYSYVKTPSPAPGADESPFITWGEIEGTPL 372



 Score = 77.8 bits (190), Expect(2) = 9e-57
 Identities = 41/61 (67%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
 Frame = +1

Query: 328 LRLEQEDTPVGIGGSR-GPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPA 504
           LRL+ EDTP+ IGGS  GP + I     RD KAHSLSREAAR  RERSK F KPPL SPA
Sbjct: 372 LRLDMEDTPIDIGGSADGPHYRIPSAPARDAKAHSLSREAARNLRERSKKFCKPPLASPA 431

Query: 505 R 507
           R
Sbjct: 432 R 432


>ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis sativus]
          Length = 509

 Score =  156 bits (395), Expect(2) = 9e-57
 Identities = 72/108 (66%), Positives = 91/108 (84%)
 Frame = +2

Query: 2   GLTKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLED 181
           GLTKEI R++TRFHGK +DSRPK++ ++ V+Y PVAG T       +R+ ++ +KYDLED
Sbjct: 265 GLTKEINRSSTRFHGKLMDSRPKDDGSVEVIYAPVAGTTP--HPVLDRDGDRLKKYDLED 322

Query: 182 MRKTPNLFYVEFGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPL 325
           +RKTPN FYVE GK+A+NGY++V+TPSPAPGVDESPFITWGEIEGTPL
Sbjct: 323 LRKTPNPFYVESGKRAENGYSFVRTPSPAPGVDESPFITWGEIEGTPL 370



 Score = 89.0 bits (219), Expect(2) = 9e-57
 Identities = 44/61 (72%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
 Frame = +1

Query: 328 LRLEQEDTPVGIGGS-RGPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPA 504
           LRL+ EDTP+ IGGS  GP+++I  P+ RD KAHSLSREAARK RE+SKMFQKPPLPSP 
Sbjct: 370 LRLDPEDTPIDIGGSVDGPRYNIPCPAARDEKAHSLSREAARKLREKSKMFQKPPLPSPV 429

Query: 505 R 507
           R
Sbjct: 430 R 430


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