BLASTX nr result
ID: Coptis24_contig00002955
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002955 (507 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera] 177 8e-65 ref|XP_002533868.1| protein with unknown function [Ricinus commu... 161 4e-59 ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|2... 156 4e-57 ref|XP_003617969.1| Protein DGCR14 [Medicago truncatula] gi|3555... 167 9e-57 ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis s... 156 9e-57 >ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera] Length = 504 Score = 177 bits (450), Expect(2) = 8e-65 Identities = 82/108 (75%), Positives = 95/108 (87%) Frame = +2 Query: 2 GLTKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLED 181 GLTKE+ TNTRFHGK +DSRPK+EDT+AV+YTP+ G T V S +ERE +K++KYDLED Sbjct: 259 GLTKEVNLTNTRFHGKLMDSRPKDEDTVAVLYTPIPGATPVPLSLSEREGDKSKKYDLED 318 Query: 182 MRKTPNLFYVEFGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPL 325 +RKTPN FYVE K+ADNGY+YVKTPSPAPGVDESPFITWGEIEGTPL Sbjct: 319 LRKTPNPFYVESRKRADNGYSYVKTPSPAPGVDESPFITWGEIEGTPL 366 Score = 94.7 bits (234), Expect(2) = 8e-65 Identities = 48/61 (78%), Positives = 50/61 (81%), Gaps = 1/61 (1%) Frame = +1 Query: 328 LRLEQEDTPVGIGGSR-GPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPA 504 LRLE EDTP+GIGGS GP F I P RD+KAHSLSREAARK RERSKMFQKPPLPSP Sbjct: 366 LRLEPEDTPIGIGGSGDGPHFKIPCPPSRDLKAHSLSREAARKLRERSKMFQKPPLPSPV 425 Query: 505 R 507 R Sbjct: 426 R 426 >ref|XP_002533868.1| protein with unknown function [Ricinus communis] gi|223526190|gb|EEF28518.1| protein with unknown function [Ricinus communis] Length = 519 Score = 161 bits (407), Expect(2) = 4e-59 Identities = 74/108 (68%), Positives = 91/108 (84%) Frame = +2 Query: 2 GLTKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLED 181 GLTKEI R+NTRFHGK +DSRPK++ ++ V+YTPV GGT + + R +K +KYDLED Sbjct: 276 GLTKEINRSNTRFHGKMLDSRPKDDGSVEVLYTPVVGGTPL--PVSGRHGDKAKKYDLED 333 Query: 182 MRKTPNLFYVEFGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPL 325 +R+TPN FY+E GKKA+NGY +V+TPSPAPGVDESPFITWGEIEGTPL Sbjct: 334 LRRTPNNFYMESGKKAENGYAFVRTPSPAPGVDESPFITWGEIEGTPL 381 Score = 92.4 bits (228), Expect(2) = 4e-59 Identities = 47/61 (77%), Positives = 49/61 (80%), Gaps = 1/61 (1%) Frame = +1 Query: 328 LRLEQEDTPVGIGGSR-GPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPA 504 LRLE EDTP+ IGGS GP F I P RDVKAH+LSREAARK RERSKMFQKPPLPSP Sbjct: 381 LRLESEDTPIDIGGSGDGPHFKILNPPARDVKAHTLSREAARKLRERSKMFQKPPLPSPG 440 Query: 505 R 507 R Sbjct: 441 R 441 >ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|222843310|gb|EEE80857.1| predicted protein [Populus trichocarpa] Length = 514 Score = 156 bits (395), Expect(2) = 4e-57 Identities = 70/108 (64%), Positives = 92/108 (85%) Frame = +2 Query: 2 GLTKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLED 181 GLTKEI R++TRFHGK +D+RP+++ + V+YTPVAG T + +R+ +K +KYDLED Sbjct: 271 GLTKEINRSSTRFHGKMLDTRPRDDGVVEVLYTPVAGATPL--PMYDRDGDKAKKYDLED 328 Query: 182 MRKTPNLFYVEFGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPL 325 +R+TP+ FYVE GKKAD+GY++V+TPSPAPGVDESPFITWGEIEGTP+ Sbjct: 329 LRRTPDRFYVESGKKADDGYSFVRTPSPAPGVDESPFITWGEIEGTPM 376 Score = 90.1 bits (222), Expect(2) = 4e-57 Identities = 44/61 (72%), Positives = 50/61 (81%), Gaps = 1/61 (1%) Frame = +1 Query: 328 LRLEQEDTPVGIGGS-RGPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPA 504 +RLE EDTP+ IGGS GP F I P RDVKAHSLSREA+R+ RE+SKMFQKPPLPSP+ Sbjct: 376 MRLEPEDTPIDIGGSGNGPHFKIPNPPARDVKAHSLSREASRRLREKSKMFQKPPLPSPS 435 Query: 505 R 507 R Sbjct: 436 R 436 >ref|XP_003617969.1| Protein DGCR14 [Medicago truncatula] gi|355519304|gb|AET00928.1| Protein DGCR14 [Medicago truncatula] Length = 510 Score = 167 bits (424), Expect(2) = 9e-57 Identities = 79/106 (74%), Positives = 91/106 (85%) Frame = +2 Query: 8 TKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLEDMR 187 TKEI R NTRFHGK +DSRPKE+ T+ ++YTPVAG T V S+ R+A+K +KYDLED+R Sbjct: 269 TKEIDRVNTRFHGKMMDSRPKEDGTVEMLYTPVAGATPVPMSF--RDADKLKKYDLEDLR 326 Query: 188 KTPNLFYVEFGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPL 325 KTPN FY+E GKKADNGY+YVKTPSPAPG DESPFITWGEIEGTPL Sbjct: 327 KTPNPFYLESGKKADNGYSYVKTPSPAPGADESPFITWGEIEGTPL 372 Score = 77.8 bits (190), Expect(2) = 9e-57 Identities = 41/61 (67%), Positives = 44/61 (72%), Gaps = 1/61 (1%) Frame = +1 Query: 328 LRLEQEDTPVGIGGSR-GPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPA 504 LRL+ EDTP+ IGGS GP + I RD KAHSLSREAAR RERSK F KPPL SPA Sbjct: 372 LRLDMEDTPIDIGGSADGPHYRIPSAPARDAKAHSLSREAARNLRERSKKFCKPPLASPA 431 Query: 505 R 507 R Sbjct: 432 R 432 >ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis sativus] Length = 509 Score = 156 bits (395), Expect(2) = 9e-57 Identities = 72/108 (66%), Positives = 91/108 (84%) Frame = +2 Query: 2 GLTKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLED 181 GLTKEI R++TRFHGK +DSRPK++ ++ V+Y PVAG T +R+ ++ +KYDLED Sbjct: 265 GLTKEINRSSTRFHGKLMDSRPKDDGSVEVIYAPVAGTTP--HPVLDRDGDRLKKYDLED 322 Query: 182 MRKTPNLFYVEFGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPL 325 +RKTPN FYVE GK+A+NGY++V+TPSPAPGVDESPFITWGEIEGTPL Sbjct: 323 LRKTPNPFYVESGKRAENGYSFVRTPSPAPGVDESPFITWGEIEGTPL 370 Score = 89.0 bits (219), Expect(2) = 9e-57 Identities = 44/61 (72%), Positives = 51/61 (83%), Gaps = 1/61 (1%) Frame = +1 Query: 328 LRLEQEDTPVGIGGS-RGPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPA 504 LRL+ EDTP+ IGGS GP+++I P+ RD KAHSLSREAARK RE+SKMFQKPPLPSP Sbjct: 370 LRLDPEDTPIDIGGSVDGPRYNIPCPAARDEKAHSLSREAARKLREKSKMFQKPPLPSPV 429 Query: 505 R 507 R Sbjct: 430 R 430