BLASTX nr result
ID: Coptis24_contig00002954
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002954 (502 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera] 274 5e-72 ref|XP_002533868.1| protein with unknown function [Ricinus commu... 252 2e-65 ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|2... 246 1e-63 ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis s... 245 2e-63 ref|XP_003617969.1| Protein DGCR14 [Medicago truncatula] gi|3555... 243 9e-63 >ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera] Length = 504 Score = 274 bits (701), Expect = 5e-72 Identities = 132/168 (78%), Positives = 148/168 (88%), Gaps = 1/168 (0%) Frame = +2 Query: 2 GLTKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLED 181 GLTKE++ TNTRFHGKL+DSRPK+EDT+AV+YTP+ G TPV S +ERE +K++KYDLED Sbjct: 259 GLTKEVNLTNTRFHGKLMDSRPKDEDTVAVLYTPIPGATPVPLSLSEREGDKSKKYDLED 318 Query: 182 MRKTPNLFYVESGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPLRLEQEDTPVGIG 361 +RKTPN FYVES K+ADNGY+YVKTPSPAPGVDESPFITWGEIEGTPLRLE EDTP+GIG Sbjct: 319 LRKTPNPFYVESRKRADNGYSYVKTPSPAPGVDESPFITWGEIEGTPLRLEPEDTPIGIG 378 Query: 362 GS-RGPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPAR 502 GS GP F I P RD+KAHSLSREAARK RERSKMFQKPPLPSP R Sbjct: 379 GSGDGPHFKIPCPPSRDLKAHSLSREAARKLRERSKMFQKPPLPSPVR 426 >ref|XP_002533868.1| protein with unknown function [Ricinus communis] gi|223526190|gb|EEF28518.1| protein with unknown function [Ricinus communis] Length = 519 Score = 252 bits (644), Expect = 2e-65 Identities = 121/168 (72%), Positives = 142/168 (84%), Gaps = 1/168 (0%) Frame = +2 Query: 2 GLTKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLED 181 GLTKEI+ +NTRFHGK++DSRPK++ ++ V+YTPV GGTP+ + R +K +KYDLED Sbjct: 276 GLTKEINRSNTRFHGKMLDSRPKDDGSVEVLYTPVVGGTPL--PVSGRHGDKAKKYDLED 333 Query: 182 MRKTPNLFYVESGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPLRLEQEDTPVGIG 361 +R+TPN FY+ESGKKA+NGY +V+TPSPAPGVDESPFITWGEIEGTPLRLE EDTP+ IG Sbjct: 334 LRRTPNNFYMESGKKAENGYAFVRTPSPAPGVDESPFITWGEIEGTPLRLESEDTPIDIG 393 Query: 362 GS-RGPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPAR 502 GS GP F I P RDVKAH+LSREAARK RERSKMFQKPPLPSP R Sbjct: 394 GSGDGPHFKILNPPARDVKAHTLSREAARKLRERSKMFQKPPLPSPGR 441 >ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|222843310|gb|EEE80857.1| predicted protein [Populus trichocarpa] Length = 514 Score = 246 bits (628), Expect = 1e-63 Identities = 115/168 (68%), Positives = 144/168 (85%), Gaps = 1/168 (0%) Frame = +2 Query: 2 GLTKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLED 181 GLTKEI+ ++TRFHGK++D+RP+++ + V+YTPVAG TP+ +R+ +K +KYDLED Sbjct: 271 GLTKEINRSSTRFHGKMLDTRPRDDGVVEVLYTPVAGATPL--PMYDRDGDKAKKYDLED 328 Query: 182 MRKTPNLFYVESGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPLRLEQEDTPVGIG 361 +R+TP+ FYVESGKKAD+GY++V+TPSPAPGVDESPFITWGEIEGTP+RLE EDTP+ IG Sbjct: 329 LRRTPDRFYVESGKKADDGYSFVRTPSPAPGVDESPFITWGEIEGTPMRLEPEDTPIDIG 388 Query: 362 GS-RGPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPAR 502 GS GP F I P RDVKAHSLSREA+R+ RE+SKMFQKPPLPSP+R Sbjct: 389 GSGNGPHFKIPNPPARDVKAHSLSREASRRLREKSKMFQKPPLPSPSR 436 >ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis sativus] Length = 509 Score = 245 bits (626), Expect = 2e-63 Identities = 117/168 (69%), Positives = 144/168 (85%), Gaps = 1/168 (0%) Frame = +2 Query: 2 GLTKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLED 181 GLTKEI+ ++TRFHGKL+DSRPK++ ++ V+Y PVAG TP +R+ ++ +KYDLED Sbjct: 265 GLTKEINRSSTRFHGKLMDSRPKDDGSVEVIYAPVAGTTP--HPVLDRDGDRLKKYDLED 322 Query: 182 MRKTPNLFYVESGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPLRLEQEDTPVGIG 361 +RKTPN FYVESGK+A+NGY++V+TPSPAPGVDESPFITWGEIEGTPLRL+ EDTP+ IG Sbjct: 323 LRKTPNPFYVESGKRAENGYSFVRTPSPAPGVDESPFITWGEIEGTPLRLDPEDTPIDIG 382 Query: 362 GS-RGPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPAR 502 GS GP+++I P+ RD KAHSLSREAARK RE+SKMFQKPPLPSP R Sbjct: 383 GSVDGPRYNIPCPAARDEKAHSLSREAARKLREKSKMFQKPPLPSPVR 430 >ref|XP_003617969.1| Protein DGCR14 [Medicago truncatula] gi|355519304|gb|AET00928.1| Protein DGCR14 [Medicago truncatula] Length = 510 Score = 243 bits (621), Expect = 9e-63 Identities = 120/166 (72%), Positives = 136/166 (81%), Gaps = 1/166 (0%) Frame = +2 Query: 8 TKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLEDMR 187 TKEI NTRFHGK++DSRPKE+ T+ ++YTPVAG TPV S+ R+A+K +KYDLED+R Sbjct: 269 TKEIDRVNTRFHGKMMDSRPKEDGTVEMLYTPVAGATPVPMSF--RDADKLKKYDLEDLR 326 Query: 188 KTPNLFYVESGKKADNGYNYVKTPSPAPGVDESPFITWGEIEGTPLRLEQEDTPVGIGGS 367 KTPN FY+ESGKKADNGY+YVKTPSPAPG DESPFITWGEIEGTPLRL+ EDTP+ IGGS Sbjct: 327 KTPNPFYLESGKKADNGYSYVKTPSPAPGADESPFITWGEIEGTPLRLDMEDTPIDIGGS 386 Query: 368 R-GPQFSIAYPSPRDVKAHSLSREAARKTRERSKMFQKPPLPSPAR 502 GP + I RD KAHSLSREAAR RERSK F KPPL SPAR Sbjct: 387 ADGPHYRIPSAPARDAKAHSLSREAARNLRERSKKFCKPPLASPAR 432