BLASTX nr result

ID: Coptis24_contig00002941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002941
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567180.1| uncharacterized protein [Arabidopsis thaliana] ...   159   5e-37
ref|XP_002262805.1| PREDICTED: uncharacterized protein LOC100258...   159   5e-37
gb|AAM63027.1| unknown [Arabidopsis thaliana]                         157   1e-36
ref|NP_001237813.1| uncharacterized protein LOC100306629 [Glycin...   155   4e-36
ref|XP_003552372.1| PREDICTED: uncharacterized protein LOC100795...   155   5e-36

>ref|NP_567180.1| uncharacterized protein [Arabidopsis thaliana]
           gi|17380736|gb|AAL36198.1| unknown protein [Arabidopsis
           thaliana] gi|20258925|gb|AAM14178.1| unknown protein
           [Arabidopsis thaliana] gi|26452418|dbj|BAC43294.1|
           unknown protein [Arabidopsis thaliana]
           gi|332656505|gb|AEE81905.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 88

 Score =  159 bits (401), Expect = 5e-37
 Identities = 74/84 (88%), Positives = 76/84 (90%), Gaps = 2/84 (2%)
 Frame = -3

Query: 528 GGDHGH-ANGEDFRGKVWSMTGGPNCRPKHWKRNTAIAMFGVFLVCIPIAMLSAKLEQRP 352
           GGDHGH A G DFR KVWSMTGGPNCRPKHW+RNTAIAMFGVFLVCIPIA LSAKLEQRP
Sbjct: 3   GGDHGHGAEGGDFRAKVWSMTGGPNCRPKHWRRNTAIAMFGVFLVCIPIAKLSAKLEQRP 62

Query: 351 HHPVRPIPSQLWCKNFGPK-DYEK 283
           H PVRPIPSQ+WCKNFG K DYEK
Sbjct: 63  HMPVRPIPSQIWCKNFGTKDDYEK 86


>ref|XP_002262805.1| PREDICTED: uncharacterized protein LOC100258376 [Vitis vinifera]
          Length = 80

 Score =  159 bits (401), Expect = 5e-37
 Identities = 73/82 (89%), Positives = 76/82 (92%), Gaps = 1/82 (1%)
 Frame = -3

Query: 531 MGG-DHGHANGEDFRGKVWSMTGGPNCRPKHWKRNTAIAMFGVFLVCIPIAMLSAKLEQR 355
           MGG DHGH  GEDFR KVWSMTGGPNCRPKHWKRNTAIAMFGVFL+CIPIAM SA+LEQR
Sbjct: 1   MGGVDHGH--GEDFRTKVWSMTGGPNCRPKHWKRNTAIAMFGVFLICIPIAMKSAELEQR 58

Query: 354 PHHPVRPIPSQLWCKNFGPKDY 289
           PHHPVRPIPSQLWCKNFG K+Y
Sbjct: 59  PHHPVRPIPSQLWCKNFGNKEY 80


>gb|AAM63027.1| unknown [Arabidopsis thaliana]
          Length = 88

 Score =  157 bits (397), Expect = 1e-36
 Identities = 73/84 (86%), Positives = 76/84 (90%), Gaps = 2/84 (2%)
 Frame = -3

Query: 528 GGDHGH-ANGEDFRGKVWSMTGGPNCRPKHWKRNTAIAMFGVFLVCIPIAMLSAKLEQRP 352
           GG+HGH A G DFR KVWSMTGGPNCRPKHW+RNTAIAMFGVFLVCIPIA LSAKLEQRP
Sbjct: 3   GGEHGHGAEGGDFRAKVWSMTGGPNCRPKHWRRNTAIAMFGVFLVCIPIAKLSAKLEQRP 62

Query: 351 HHPVRPIPSQLWCKNFGPK-DYEK 283
           H PVRPIPSQ+WCKNFG K DYEK
Sbjct: 63  HMPVRPIPSQIWCKNFGTKDDYEK 86


>ref|NP_001237813.1| uncharacterized protein LOC100306629 [Glycine max]
           gi|255629121|gb|ACU14905.1| unknown [Glycine max]
          Length = 90

 Score =  155 bits (393), Expect = 4e-36
 Identities = 69/81 (85%), Positives = 73/81 (90%), Gaps = 1/81 (1%)
 Frame = -3

Query: 528 GGDHGHANGE-DFRGKVWSMTGGPNCRPKHWKRNTAIAMFGVFLVCIPIAMLSAKLEQRP 352
           GGDHGH +G  DFR KVWSM+GGP CRPKHWKRNTAIAMFGV L+CIPIAM SA+LEQRP
Sbjct: 5   GGDHGHGHGHGDFRNKVWSMSGGPYCRPKHWKRNTAIAMFGVVLICIPIAMKSAELEQRP 64

Query: 351 HHPVRPIPSQLWCKNFGPKDY 289
           HHPVRPIPSQLWCKNFG KDY
Sbjct: 65  HHPVRPIPSQLWCKNFGTKDY 85


>ref|XP_003552372.1| PREDICTED: uncharacterized protein LOC100795291 [Glycine max]
          Length = 88

 Score =  155 bits (392), Expect = 5e-36
 Identities = 69/84 (82%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
 Frame = -3

Query: 528 GGDHGHANGE-DFRGKVWSMTGGPNCRPKHWKRNTAIAMFGVFLVCIPIAMLSAKLEQRP 352
           GGDHGH +G  DFR KVWSM+GGP CRPKHWKRNTAIAM GV L+CIPIAM SA+LEQRP
Sbjct: 5   GGDHGHGHGHGDFRNKVWSMSGGPYCRPKHWKRNTAIAMVGVVLICIPIAMKSAELEQRP 64

Query: 351 HHPVRPIPSQLWCKNFGPKDYEKP 280
           HHPVRPIPSQLWCKNFG KDY  P
Sbjct: 65  HHPVRPIPSQLWCKNFGTKDYNDP 88


Top