BLASTX nr result
ID: Coptis24_contig00002940
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002940 (1788 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinu... 290 9e-76 ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259... 221 6e-55 ref|NP_001146241.1| uncharacterized protein LOC100279814 [Zea ma... 220 8e-55 ref|XP_002451801.1| hypothetical protein SORBIDRAFT_04g007950 [S... 217 9e-54 gb|ACN27617.1| unknown [Zea mays] gi|413926085|gb|AFW66017.1| hy... 211 4e-52 >ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis] gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1, putative [Ricinus communis] Length = 544 Score = 290 bits (742), Expect = 9e-76 Identities = 183/447 (40%), Positives = 239/447 (53%), Gaps = 13/447 (2%) Frame = +1 Query: 1 VNDVISETDXXXXXXXXXXXXXXXXHGGDQFAMKVPNDKVAWVIGKGGETIKNIQSRSGA 180 +NDVI+ETD G +QF+++VPNDKV +IGKGGETIK +QSRSGA Sbjct: 152 INDVIAETDAGGSASSAVHGLNTKQPGAEQFSIRVPNDKVGLLIGKGGETIKYMQSRSGA 211 Query: 181 RIQIIPLRLPPGDTSTXXXXXXXXXXXXXXXXXXXXXXPGDTSTERSVYISGTQEQIDSA 360 R+QIIPL LPPGD +T ER+VYI+G EQI++A Sbjct: 212 RMQIIPLHLPPGDPTT----------------------------ERTVYINGLTEQIEAA 243 Query: 361 KDLINDVVSGNRL-NPQTTSNYTQQGYGPPGNWSQP---PMQQPAHGYAQPGAYPTGXXX 528 K+L+NDV++G R+ +P +S+Y Q Y GNW+QP PMQQP +GYAQPG PT Sbjct: 244 KELVNDVLNGKRIIDPTGSSSYGQPTYPATGNWAQPGQTPMQQPQYGYAQPGNQPT---- 299 Query: 529 XXXXXXXXXAAPTWDQSNPSSAHLPPXXXXXXXXXXXXXPTETGSAQANASYAYGQAPP- 705 P WDQSNP++ + GSA N+SY Q PP Sbjct: 300 PPAYYGNYTQQPAWDQSNPTTMS---QTQQMAGYGYYGQQPQMGSAPLNSSY--NQTPPV 354 Query: 706 STNNYDQSYSQQPHSYGQDTAAQAPQHDQQKQYTSPGYGPPAASSQLDGTVLGQSYGTQS 885 +++ Y SYSQQ +YGQ+ ++Q P +QQ+ Y + YG A SSQ DG + QS TQ+ Sbjct: 355 ASSGYGNSYSQQTSNYGQNISSQTPTLEQQRPYATSNYGSAAVSSQSDGAISSQS--TQA 412 Query: 886 S-TQPPSAYPVDYNQPQNVSSAGYGPSQGYTAPLANHPGYDQTGYNQSGYGGQKPPQYLP 1062 + PP AY PQ Y + GY GYDQTGY+Q+GYG Sbjct: 413 APAYPPPAYNQQVADPQT-----YWTAAGYAGQPPPQTGYDQTGYSQAGYGVS------- 460 Query: 1063 PVQNPVPTSQPVYGQGGYPSQPAPAQPTYVQGTNPPGYGQQQPHTQSTTYTEK------- 1221 + ++QPVYGQGGYP QP+PA Y QGTNP GYGQ Q Q + Sbjct: 461 -----LSSNQPVYGQGGYPLQPSPAAANYAQGTNPLGYGQPQLEAQPQSQPSNNGHSQSL 515 Query: 1222 TYGSERNGDGNNAQSGYASSPAVQEGV 1302 YG+E + DG N+ G+ S+P+V+E V Sbjct: 516 AYGAEIH-DG-NSNPGHGSNPSVKEAV 540 >ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera] Length = 690 Score = 221 bits (562), Expect = 6e-55 Identities = 176/492 (35%), Positives = 212/492 (43%), Gaps = 55/492 (11%) Frame = +1 Query: 1 VNDVISETDXXXXXXXXXXXXXXXXHGGDQFAMKVPNDKVAWVIGKGGETIKNIQSRSGA 180 +NDV+SE + G +QF MKVPN+KV +IGKGGETIKN+Q+R+GA Sbjct: 202 INDVLSEAEAGGSGIVSRRLTGQA--GSEQFVMKVPNNKVGLIIGKGGETIKNMQARTGA 259 Query: 181 RIQIIPLRLPPGDTSTXXXXXXXXXXXXXXXXXXXXXXPGDTSTERSVYISGTQEQIDSA 360 RIQ+IPL LPPGDT S ER+V I GT EQI+SA Sbjct: 260 RIQVIPLHLPPGDT----------------------------SMERTVQIDGTSEQIESA 291 Query: 361 KDLINDVVSGNRL-NPQTTSNYTQQGY--GPPGNW----SQPPMQQPAHGYAQPGAYP-- 513 K L+N+V+S NR+ NP Y QQGY PP W PPMQQP + YAQPG+YP Sbjct: 292 KQLVNEVISENRIRNPAMAGGYPQQGYQARPPSGWGAPPGAPPMQQPGYSYAQPGSYPGP 351 Query: 514 -----------TGXXXXXXXXXXXXAAPTWDQSNPSSAHLPPXXXXXXXXXXXXXPTETG 660 G AAP Q+ P S + +G Sbjct: 352 SPQYNMSQPAYAGYSQPNATGWDQTAAPPSQQTTPGSGY-DYYGQQQTQQQQQAHGGPSG 410 Query: 661 SAQANASYAYGQAPPS-TNNYDQSYSQQPHSYGQDTAAQAPQ-----------HDQQKQY 804 A N+ Y Y Q P S N Q Y Q YG A APQ +DQQ+ Y Sbjct: 411 PAD-NSGYNYNQPPASGYNQQGQGYPQD--GYGGGYHAPAPQPGYGQPQPIPGYDQQQGY 467 Query: 805 TS-PGYGPPAASSQLDGTVLGQSYGTQSST--QPPSAYP-----VDYNQPQNVSSAGYGP 960 S GYG A +Q T SYG Q T PPS P YN Q S P Sbjct: 468 NSATGYGNVANPTQEGHTT---SYGAQGETGQAPPSVQPSAIGQQGYNTQQPSPSPASYP 524 Query: 961 SQGYTAPLANHPGYDQTGYNQSGYGGQKPPQ------YLPPVQNPVPTSQPVYG------ 1104 QG +N P Y +Q+G+G Q P Q Y PP P + PVYG Sbjct: 525 PQG-----SNQPAYGMPPTSQTGFGSQPPAQSGYTTNYGPPQAQKAPANPPVYGQTQQSP 579 Query: 1105 --QGGYPSQPAPAQPTYVQGTNPPGY-GQQQPHTQSTTYTEKTYGSERNGDGNNAQSGYA 1275 QGGY +QPAP QP Y PP G Q + S +YG+ G S Y+ Sbjct: 580 SAQGGY-AQPAPVQPGYPHSQQPPAQSGYAQTDSSSQRAAPSSYGTAAGQPGYGGPSAYS 638 Query: 1276 SSPAVQEGVHPQ 1311 + Q G Q Sbjct: 639 APTVTQAGYGQQ 650 >ref|NP_001146241.1| uncharacterized protein LOC100279814 [Zea mays] gi|219886335|gb|ACL53542.1| unknown [Zea mays] gi|413926084|gb|AFW66016.1| hypothetical protein ZEAMMB73_777138 [Zea mays] Length = 692 Score = 220 bits (561), Expect = 8e-55 Identities = 171/465 (36%), Positives = 213/465 (45%), Gaps = 59/465 (12%) Frame = +1 Query: 79 GGDQFAMKVPNDKVAWVIGKGGETIKNIQSRSGARIQIIPLRLPPGDTSTXXXXXXXXXX 258 G + F MK+ N+KV +IGKGGETIK++Q+ SGARIQ+IPL LP GDTS Sbjct: 232 GAETFQMKIANNKVGLIIGKGGETIKSMQANSGARIQVIPLHLPAGDTS----------- 280 Query: 259 XXXXXXXXXXXXPGDTSTERSVYISGTQEQIDSAKDLINDVVSGNRLNPQTTSNYTQQGY 438 TER+V+I GTQEQI++AK LI++V S NR + Y+QQGY Sbjct: 281 -----------------TERTVHIDGTQEQIEAAKQLISEVTSENRARNPMSGGYSQQGY 323 Query: 439 GPP---GNWSQP--PMQQPAHGYAQPGAYPTGXXXXXXXXXXXXAAPT--------WDQS 579 PP NW P P QQP +GY QPGAYP + P WDQS Sbjct: 324 RPPRPQSNWGPPSVPPQQPGYGYMQPGAYPGAPPQYGAPQQPYGSYPPTSGGYQTGWDQS 383 Query: 580 NPSSAHLPPXXXXXXXXXXXXXPTE-----TGSAQANASYAYGQAPPST---NNYDQSYS 735 +H P P + T ++ SY YGQ PST YD +Y+ Sbjct: 384 QNQQSHTTPPGTGYDYYSQQQQPQQQSAPGTAASTDATSYNYGQ--PSTYASQGYDSTYT 441 Query: 736 QQ---PHSYGQD------TAAQAPQHDQQKQYTSPGYGPPAASSQLDGTVLGQSYG---- 876 QQ +YG D T Q + QQ Y GYG A S T G +YG Sbjct: 442 QQSGGQQAYGHDGYTGYQTQGQQQGYSQQTGYDQQGYGTSAYGSAASSTQDGSNYGGPGG 501 Query: 877 -TQSS-----------------TQPPSAYPVDYNQPQNVSSAGYG--PSQ-GYTAPLANH 993 +Q+S +QPP++ Y PQ + +GYG PSQ GY Sbjct: 502 ASQASPGQQTSNPAAGSQPGYTSQPPTSAAATY-PPQGSAPSGYGAPPSQSGYGTQPPQQ 560 Query: 994 PGYDQTGYNQSGYGGQKPPQYLPPVQNPVP-TSQPVYGQGGYPSQPAPAQPTYVQG---T 1161 GY Q Y Q GQKPP P Q P P ++Q YGQ GY SQPA P G Sbjct: 561 AGYGQGAYGQPSPQGQKPPALSPYGQAPPPGSAQAGYGQYGY-SQPAYGAPPAYPGAPIA 619 Query: 1162 NPPGYGQQQPHTQSTTYTEKTYGSERNGDGNNAQSGYASSPAVQE 1296 + GYGQQQ + Q +Y + YGS G A S A+ PA + Sbjct: 620 SHQGYGQQQSYGQQQSYGD-AYGSASYGQ-PPAYSTEATPPAASQ 662 >ref|XP_002451801.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor] gi|241931632|gb|EES04777.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor] Length = 688 Score = 217 bits (552), Expect = 9e-54 Identities = 169/468 (36%), Positives = 210/468 (44%), Gaps = 58/468 (12%) Frame = +1 Query: 1 VNDVISETDXXXXXXXXXXXXXXXXHGGDQFAMKVPNDKVAWVIGKGGETIKNIQSRSGA 180 + +V++E D GG+ F MK+ N+KV VIGKGGETIK++Q ++GA Sbjct: 209 IKEVLAEADAGSSGGGSGRKYNAPQPGGETFQMKIANNKVGLVIGKGGETIKSMQQKTGA 268 Query: 181 RIQIIPLRLPPGDTSTXXXXXXXXXXXXXXXXXXXXXXPGDTSTERSVYISGTQEQIDSA 360 RIQ+IPL LP GDTS TER+V+I GT EQI+SA Sbjct: 269 RIQVIPLHLPAGDTS----------------------------TERTVHIDGTPEQIESA 300 Query: 361 KDLINDVVSGNRLNPQTTSNYTQQGYGPP---GNWSQP--PMQQPAHGYAQPGAYPTGXX 525 K L+ +V S NR + Y+QQGY PP NW P P QQP +GY QPGAYP Sbjct: 301 KQLVIEVTSENRARNPMSGGYSQQGYRPPRPQSNWGPPSAPPQQPGYGYMQPGAYPGAPP 360 Query: 526 XXXXXXXXXXAAPT--------WDQSNPSSAHLPPXXXXXXXXXXXXXPTETGSAQANA- 678 + P WDQS +H P P + SA A Sbjct: 361 QYGAPQQPYGSYPPTSGGYQTGWDQSQNQQSHTTPPGTGYDYYSQQQQPQQQQSAPGTAA 420 Query: 679 -----SYAYGQAPPST---NNYDQSYSQQ---PHSYGQD------TAAQAPQHDQQKQYT 807 SY YGQ PST YD +Y+QQ +YG D T Q + QQ Y Sbjct: 421 STDATSYNYGQ--PSTYASQGYDSTYTQQSGGQQAYGHDGYSGYQTQGQQQGYSQQTGYD 478 Query: 808 SPGYGPPAASSQLDGTVLGQ--SYG----------TQSSTQPPSAYPVDYNQPQNVSSAG 951 GYG A S + T G SYG Q S+ P +++P +QP ++A Sbjct: 479 QQGYGASAYGSAANSTQDGSAASYGGPGGASQASPGQQSSTPAASHPGYASQPPTSAAAS 538 Query: 952 YGPSQ-----GYTAPL------ANHPGYDQTGYNQSGYGGQKPPQYLPPVQNPVP-TSQP 1095 Y P+Q GY AP PGY Q Y Q GQKPP P Q P P ++Q Sbjct: 539 Y-PTQGSAPSGYGAPPPQSGYGTQPPGYGQGAYGQPSPQGQKPPASSPYGQAPPPGSAQG 597 Query: 1096 VYGQGGYPSQPAPAQPTYVQG---TNPPGYGQQQPHTQSTTYTEKTYG 1230 YGQ GY SQPA P G ++ PGYGQQQ + Y YG Sbjct: 598 GYGQYGY-SQPAYGAPPAYPGAPHSSHPGYGQQQSY--GDAYGSGNYG 642 >gb|ACN27617.1| unknown [Zea mays] gi|413926085|gb|AFW66017.1| hypothetical protein ZEAMMB73_777138 [Zea mays] Length = 704 Score = 211 bits (538), Expect = 4e-52 Identities = 171/477 (35%), Positives = 213/477 (44%), Gaps = 71/477 (14%) Frame = +1 Query: 79 GGDQFAMKVPNDKVAWVIGKGGETIKNIQSRSGARIQIIPLRLPPGDTSTXXXXXXXXXX 258 G + F MK+ N+KV +IGKGGETIK++Q+ SGARIQ+IPL LP GDTS Sbjct: 232 GAETFQMKIANNKVGLIIGKGGETIKSMQANSGARIQVIPLHLPAGDTS----------- 280 Query: 259 XXXXXXXXXXXXPGDTSTERSVYISGTQEQIDSAKDLINDVVS------------GNRLN 402 TER+V+I GTQEQI++AK LI++V S NR Sbjct: 281 -----------------TERTVHIDGTQEQIEAAKQLISEVTSELARRTANYPGEQNRAR 323 Query: 403 PQTTSNYTQQGYGPP---GNWSQP--PMQQPAHGYAQPGAYPTGXXXXXXXXXXXXAAPT 567 + Y+QQGY PP NW P P QQP +GY QPGAYP + P Sbjct: 324 NPMSGGYSQQGYRPPRPQSNWGPPSVPPQQPGYGYMQPGAYPGAPPQYGAPQQPYGSYPP 383 Query: 568 --------WDQSNPSSAHLPPXXXXXXXXXXXXXPTE-----TGSAQANASYAYGQAPPS 708 WDQS +H P P + T ++ SY YGQ PS Sbjct: 384 TSGGYQTGWDQSQNQQSHTTPPGTGYDYYSQQQQPQQQSAPGTAASTDATSYNYGQ--PS 441 Query: 709 T---NNYDQSYSQQ---PHSYGQD------TAAQAPQHDQQKQYTSPGYGPPAASSQLDG 852 T YD +Y+QQ +YG D T Q + QQ Y GYG A S Sbjct: 442 TYASQGYDSTYTQQSGGQQAYGHDGYTGYQTQGQQQGYSQQTGYDQQGYGTSAYGSAASS 501 Query: 853 TVLGQSYG-----TQSS-----------------TQPPSAYPVDYNQPQNVSSAGYG--P 960 T G +YG +Q+S +QPP++ Y PQ + +GYG P Sbjct: 502 TQDGSNYGGPGGASQASPGQQTSNPAAGSQPGYTSQPPTSAAATY-PPQGSAPSGYGAPP 560 Query: 961 SQ-GYTAPLANHPGYDQTGYNQSGYGGQKPPQYLPPVQNPVP-TSQPVYGQGGYPSQPAP 1134 SQ GY GY Q Y Q GQKPP P Q P P ++Q YGQ GY SQPA Sbjct: 561 SQSGYGTQPPQQAGYGQGAYGQPSPQGQKPPALSPYGQAPPPGSAQAGYGQYGY-SQPAY 619 Query: 1135 AQPTYVQG---TNPPGYGQQQPHTQSTTYTEKTYGSERNGDGNNAQSGYASSPAVQE 1296 P G + GYGQQQ + Q +Y + YGS G A S A+ PA + Sbjct: 620 GAPPAYPGAPIASHQGYGQQQSYGQQQSYGD-AYGSASYGQ-PPAYSTEATPPAASQ 674