BLASTX nr result
ID: Coptis24_contig00002939
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002939 (287 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis] 67 1e-09 emb|CAN66621.1| hypothetical protein VITISV_023013 [Vitis vinifera] 65 6e-09 emb|CAN74220.1| hypothetical protein VITISV_032121 [Vitis vinifera] 64 1e-08 emb|CAN75177.1| hypothetical protein VITISV_032736 [Vitis vinifera] 64 2e-08 emb|CAN61333.1| hypothetical protein VITISV_006079 [Vitis vinifera] 64 2e-08 >gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis] Length = 1788 Score = 67.4 bits (163), Expect = 1e-09 Identities = 37/86 (43%), Positives = 55/86 (63%) Frame = -3 Query: 285 NERDKGRFPSQPVANPKGQYEIGSNLNQGHHHEQVKSITTLRSGKHVDNKVEMPRVEVRS 106 +ER+KG+FPSQPVANPK + GS+ N + Q+ +I TLRSGK +DN+V MP + S Sbjct: 374 SEREKGKFPSQPVANPK---DTGSSSN---NPAQLNAIHTLRSGKQIDNQVRMPPDQTPS 427 Query: 105 NLGEHESEESDTSDPHASEASMQPSI 28 + S+E+ SD +E ++P + Sbjct: 428 PIQNTPSDETIPSDDQNAELEIEPDL 453 >emb|CAN66621.1| hypothetical protein VITISV_023013 [Vitis vinifera] Length = 1498 Score = 65.1 bits (157), Expect = 6e-09 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 3/88 (3%) Frame = -3 Query: 279 RDKGRFPSQPVANPKGQYEIGSNLNQGHHHEQVKSITTLRSGKHVDNKVEMPRVEVRSNL 100 ++KGRFPSQP NPKG +E+ S + H + VK + TLRSGK ++ P VE ++ Sbjct: 325 QEKGRFPSQPYQNPKGVHEVESQEGESSHTKDVKDLITLRSGKKIEQPTLKPHVEKEEDI 384 Query: 99 ---GEHESEESDTSDPHASEASMQPSIP 25 E E +ES+ S+ S +IP Sbjct: 385 KKGKEMEDKESEISEEKKDSDSTMNAIP 412 >emb|CAN74220.1| hypothetical protein VITISV_032121 [Vitis vinifera] Length = 1730 Score = 63.9 bits (154), Expect = 1e-08 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 3/88 (3%) Frame = -3 Query: 279 RDKGRFPSQPVANPKGQYEIGSNLNQGHHHEQVKSITTLRSGKHVDNKVEMPRVEVRSNL 100 ++KGRFPSQP NPKG +E+ S + + VK++ TLRSGK ++ P VE + Sbjct: 466 QEKGRFPSQPHQNPKGVHEVESQEGESSQMKDVKALITLRSGKKIEQPTPKPHVEKEEEI 525 Query: 99 ---GEHESEESDTSDPHASEASMQPSIP 25 E E +ES+TS+ S + IP Sbjct: 526 KKGKEMEDKESETSEEKKDSDSTRKVIP 553 >emb|CAN75177.1| hypothetical protein VITISV_032736 [Vitis vinifera] Length = 2264 Score = 63.5 bits (153), Expect = 2e-08 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 3/88 (3%) Frame = -3 Query: 279 RDKGRFPSQPVANPKGQYEIGSNLNQGHHHEQVKSITTLRSGKHVDNKVEMPRVEVRSNL 100 ++KGRFPSQP NPKG +E+ S + + VK++ TLRSGK ++ + P VE + Sbjct: 437 QEKGRFPSQPHQNPKGVHEVESQEGESSQMKDVKALITLRSGKKIEQSIPKPHVEKEEEI 496 Query: 99 ---GEHESEESDTSDPHASEASMQPSIP 25 E E +ES+ S+ S +IP Sbjct: 497 KKGKEMEDKESEISEEKKDSDSTMNAIP 524 >emb|CAN61333.1| hypothetical protein VITISV_006079 [Vitis vinifera] Length = 1689 Score = 63.5 bits (153), Expect = 2e-08 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 3/88 (3%) Frame = -3 Query: 279 RDKGRFPSQPVANPKGQYEIGSNLNQGHHHEQVKSITTLRSGKHVDNKVEMPRVEVRSNL 100 ++KGRFPSQP NPKG +E+ S+ + + VK++ TLRSGK ++ MP VE + Sbjct: 558 QEKGRFPSQPNQNPKGVHEVESHEGESSQVKDVKALITLRSGKKIEQPTPMPHVEKEEEI 617 Query: 99 ---GEHESEESDTSDPHASEASMQPSIP 25 E E +ES+ S+ S +IP Sbjct: 618 KKGKEMEDKESEISEEKKESDSTIKAIP 645