BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002923
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteo...   198   4e-49
ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteo...   194   8e-48
gb|ACU19554.1| unknown [Glycine max]                                  193   2e-47
ref|XP_003518640.1| PREDICTED: ATP-dependent Clp protease proteo...   190   1e-46
ref|XP_004167647.1| PREDICTED: ATP-dependent Clp protease proteo...   186   2e-45

>ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic [Vitis vinifera]
          Length = 320

 Score =  198 bits (504), Expect = 4e-49
 Identities = 97/126 (76%), Positives = 104/126 (82%), Gaps = 8/126 (6%)
 Frame = -1

Query: 558 ASEMGLRIREMMYHKTKLNKILSRITGKPEHQVELDTDRDNFMNPWEAKEYGLVDAVIDD 379
           A+EMG+RIREMMYHK KLNKILSRITGKPE Q+E DTDRDNFMN WEAKEYGL+DAVIDD
Sbjct: 195 ATEMGIRIREMMYHKIKLNKILSRITGKPEQQIEADTDRDNFMNAWEAKEYGLIDAVIDD 254

Query: 378 GKPGLVAPIGDATPPPKTRVWDQWKVEGRRKAMKNLPSEEKLYQNG--------GQEQER 223
           GKPGLVAP  DA PPPKTRVW  WKVEG RKA KNLPSE KL QNG        G EQE+
Sbjct: 255 GKPGLVAPTADAGPPPKTRVWGLWKVEGSRKAKKNLPSEHKLLQNGHQGGDDEKGTEQEK 314

Query: 222 EAAAPV 205
           EA++PV
Sbjct: 315 EASSPV 320


>ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Glycine max]
          Length = 322

 Score =  194 bits (493), Expect = 8e-48
 Identities = 89/108 (82%), Positives = 96/108 (88%)
 Frame = -1

Query: 558 ASEMGLRIREMMYHKTKLNKILSRITGKPEHQVELDTDRDNFMNPWEAKEYGLVDAVIDD 379
           A+EM +RIREM YHK K+NKILSRITGKPE Q+ELDTDRDNFMNPWEAKEYGLVD VIDD
Sbjct: 194 ATEMSIRIREMAYHKIKINKILSRITGKPEEQIELDTDRDNFMNPWEAKEYGLVDGVIDD 253

Query: 378 GKPGLVAPIGDATPPPKTRVWDQWKVEGRRKAMKNLPSEEKLYQNGGQ 235
           GKPGLVAPIGDA+PPPKTRVWDQWK+EG RKA KNLPSE K  QN  +
Sbjct: 254 GKPGLVAPIGDASPPPKTRVWDQWKIEGSRKAKKNLPSEHKFLQNASK 301


>gb|ACU19554.1| unknown [Glycine max]
          Length = 322

 Score =  193 bits (490), Expect = 2e-47
 Identities = 89/108 (82%), Positives = 95/108 (87%)
 Frame = -1

Query: 558 ASEMGLRIREMMYHKTKLNKILSRITGKPEHQVELDTDRDNFMNPWEAKEYGLVDAVIDD 379
           A+EM +RIREM YHK K+NKILSRITGKPE Q+ELDTDRDNFMNPWEAKEYGLVD VIDD
Sbjct: 194 ATEMSIRIREMAYHKIKINKILSRITGKPEEQIELDTDRDNFMNPWEAKEYGLVDGVIDD 253

Query: 378 GKPGLVAPIGDATPPPKTRVWDQWKVEGRRKAMKNLPSEEKLYQNGGQ 235
           GKPGLVAPIGDA PPPKTRVWDQWK+EG RKA KNLPSE K  QN  +
Sbjct: 254 GKPGLVAPIGDAFPPPKTRVWDQWKIEGSRKAKKNLPSEHKFLQNASK 301


>ref|XP_003518640.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Glycine max]
          Length = 319

 Score =  190 bits (483), Expect = 1e-46
 Identities = 87/108 (80%), Positives = 95/108 (87%)
 Frame = -1

Query: 558 ASEMGLRIREMMYHKTKLNKILSRITGKPEHQVELDTDRDNFMNPWEAKEYGLVDAVIDD 379
           A+EM +RIREM YHK K+NKILSRITGKPE Q+ELDTDRDNFMNPWEAKEYGLVD VIDD
Sbjct: 194 ATEMSIRIREMAYHKIKINKILSRITGKPEEQIELDTDRDNFMNPWEAKEYGLVDGVIDD 253

Query: 378 GKPGLVAPIGDATPPPKTRVWDQWKVEGRRKAMKNLPSEEKLYQNGGQ 235
           GKPGLVAPIGD++PPPKTRVWD WK+EG RKA KNLPSE K  QN  +
Sbjct: 254 GKPGLVAPIGDSSPPPKTRVWDLWKIEGSRKAKKNLPSEHKFLQNASK 301


>ref|XP_004167647.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Cucumis sativus]
          Length = 339

 Score =  186 bits (473), Expect = 2e-45
 Identities = 89/130 (68%), Positives = 101/130 (77%), Gaps = 12/130 (9%)
 Frame = -1

Query: 558 ASEMGLRIREMMYHKTKLNKILSRITGKPEHQVELDTDRDNFMNPWEAKEYGLVDAVIDD 379
           A+EM +RIREM YHK KLNKI SRITGKP  Q+ELDT+RDNFMNPWEAKEYGL+D VIDD
Sbjct: 210 ATEMSIRIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDD 269

Query: 378 GKPGLVAPIGDATPPPKTRVWDQWKVEGRRKAMKNLPSEEKLYQNG------------GQ 235
           GKPGL+API +ATPPPKTR+WD WKVEG RKA KNLPSE K+ +NG            G 
Sbjct: 270 GKPGLIAPIAEATPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYEEGGQGSDKERGG 329

Query: 234 EQEREAAAPV 205
           +QE E  +PV
Sbjct: 330 QQETEEPSPV 339