BLASTX nr result
ID: Coptis24_contig00002912
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002912 (1938 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298064.1| predicted protein [Populus trichocarpa] gi|2... 719 0.0 ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplast... 717 0.0 ref|XP_002304468.1| predicted protein [Populus trichocarpa] gi|2... 717 0.0 ref|XP_003525588.1| PREDICTED: elongation factor Tu, chloroplast... 712 0.0 ref|XP_003523105.1| PREDICTED: elongation factor Tu, chloroplast... 712 0.0 >ref|XP_002298064.1| predicted protein [Populus trichocarpa] gi|222845322|gb|EEE82869.1| predicted protein [Populus trichocarpa] Length = 483 Score = 719 bits (1857), Expect = 0.0 Identities = 360/417 (86%), Positives = 379/417 (90%) Frame = +2 Query: 257 RGRSLTVRAARGKFERKKPHVNIGTIGHVDHGKXXXXXXXXXXXXSIGGSASKKYDEIDA 436 R R+ TVRAARGKFERKKPHVNIGTIGHVDHGK S+GGSA KKYDEIDA Sbjct: 67 RHRTFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGGSAPKKYDEIDA 126 Query: 437 APEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 616 APEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP Sbjct: 127 APEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 186 Query: 617 MPQTKEHILLAKQVGVPNMVVFLNKQDQXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIIS 796 MPQTKEHILLAKQVGVPNMVVFLNKQDQ SSYEFPGDD+PIIS Sbjct: 187 MPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDIPIIS 246 Query: 797 GSALLALEALMANPAIKKGDNTWVDKIYALMDAVDDYIPIPQRQTELPFLLAVEDVFSIT 976 GSALLALEALM NPAIK+G+N WVDKIY LMD VD+YIPIPQRQT+LPFLLAVEDVFSIT Sbjct: 247 GSALLALEALMENPAIKRGENQWVDKIYELMDNVDNYIPIPQRQTDLPFLLAVEDVFSIT 306 Query: 977 GRGTVATGRVERGTVRVGETVELIGLRETRNTTVTGVEMFQKILDEALAGDNVGILLRGI 1156 GRGTVATGRVERGT+R G+TV+++GLRETRNTTVTGVEMFQKILDEALAGDNVG+LLRG+ Sbjct: 307 GRGTVATGRVERGTIRTGDTVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGV 366 Query: 1157 QKADIQRGMVLAKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRV 1336 QKADIQRGMVL+KPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRV Sbjct: 367 QKADIQRGMVLSKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRV 426 Query: 1337 ASIMNDKDEESKMVMPGDRVKMIVELIMPVACEQGMRFAIREGGKTVGAGVIQSIVE 1507 A+IMNDKDEESKMVMPGDRVKMIVELIMPVACEQGMRFAIREGGKTVGAGVIQ+I+E Sbjct: 427 ATIMNDKDEESKMVMPGDRVKMIVELIMPVACEQGMRFAIREGGKTVGAGVIQAIIE 483 >ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplastic-like isoform 1 [Vitis vinifera] gi|359488736|ref|XP_003633809.1| PREDICTED: elongation factor Tu, chloroplastic-like isoform 2 [Vitis vinifera] gi|359488738|ref|XP_003633810.1| PREDICTED: elongation factor Tu, chloroplastic-like isoform 3 [Vitis vinifera] Length = 487 Score = 717 bits (1852), Expect = 0.0 Identities = 359/417 (86%), Positives = 378/417 (90%) Frame = +2 Query: 257 RGRSLTVRAARGKFERKKPHVNIGTIGHVDHGKXXXXXXXXXXXXSIGGSASKKYDEIDA 436 R RSLTVRAARGKFERKKPHVNIGTIGHVDHGK S+G SA KKYDEIDA Sbjct: 71 RRRSLTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDEIDA 130 Query: 437 APEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 616 APEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP Sbjct: 131 APEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 190 Query: 617 MPQTKEHILLAKQVGVPNMVVFLNKQDQXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIIS 796 MPQTKEHILLAKQVGVPNMVVFLNKQDQ +SYEFPGDD+PI+S Sbjct: 191 MPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLASYEFPGDDIPIVS 250 Query: 797 GSALLALEALMANPAIKKGDNTWVDKIYALMDAVDDYIPIPQRQTELPFLLAVEDVFSIT 976 GSALLALEALMANP+IK+G+N WVDKIY LMDAVD YIPIPQRQT+LPFLLAVEDVFSIT Sbjct: 251 GSALLALEALMANPSIKRGENEWVDKIYELMDAVDSYIPIPQRQTDLPFLLAVEDVFSIT 310 Query: 977 GRGTVATGRVERGTVRVGETVELIGLRETRNTTVTGVEMFQKILDEALAGDNVGILLRGI 1156 GRGTVATGRVERGT++VGETV+L+GLRETR TTVTGVEMFQKILDEALAGDNVG+LLRGI Sbjct: 311 GRGTVATGRVERGTIKVGETVDLVGLRETRATTVTGVEMFQKILDEALAGDNVGLLLRGI 370 Query: 1157 QKADIQRGMVLAKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRV 1336 QKADIQRGMVLAKPG+ITPHTKF AIVY+LKKEEGGRHSPFFAGYRPQFYMRTTDVTG+V Sbjct: 371 QKADIQRGMVLAKPGTITPHTKFSAIVYILKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV 430 Query: 1337 ASIMNDKDEESKMVMPGDRVKMIVELIMPVACEQGMRFAIREGGKTVGAGVIQSIVE 1507 A IMNDKDEESKMVMPGDRVKM+VELIMPVACEQGMRFAIREGGKTVGAGVIQSI+E Sbjct: 431 AQIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 487 >ref|XP_002304468.1| predicted protein [Populus trichocarpa] gi|222841900|gb|EEE79447.1| predicted protein [Populus trichocarpa] Length = 425 Score = 717 bits (1852), Expect = 0.0 Identities = 359/417 (86%), Positives = 378/417 (90%) Frame = +2 Query: 257 RGRSLTVRAARGKFERKKPHVNIGTIGHVDHGKXXXXXXXXXXXXSIGGSASKKYDEIDA 436 R R LTVRAARGKFERKKPHVNIGTIGHVDHGK S+GGSA KKYDEIDA Sbjct: 9 RHRFLTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGGSAPKKYDEIDA 68 Query: 437 APEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 616 APEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP Sbjct: 69 APEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 128 Query: 617 MPQTKEHILLAKQVGVPNMVVFLNKQDQXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIIS 796 MPQTKEHILLAKQVGVPNMVVFLNKQDQ SSYEFPGDD+PIIS Sbjct: 129 MPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDIPIIS 188 Query: 797 GSALLALEALMANPAIKKGDNTWVDKIYALMDAVDDYIPIPQRQTELPFLLAVEDVFSIT 976 GSALLALEALM NPAIK+G+N WVDKIY LMD VD+YIPIPQRQT+LPFLLAVEDVFSIT Sbjct: 189 GSALLALEALMENPAIKRGENQWVDKIYELMDNVDNYIPIPQRQTDLPFLLAVEDVFSIT 248 Query: 977 GRGTVATGRVERGTVRVGETVELIGLRETRNTTVTGVEMFQKILDEALAGDNVGILLRGI 1156 GRGTVATGRVERGT++ G+TV+++GLRETRN TVTGVEMFQKILDEALAGDNVG+LLRG+ Sbjct: 249 GRGTVATGRVERGTIKTGDTVDIVGLRETRNVTVTGVEMFQKILDEALAGDNVGLLLRGV 308 Query: 1157 QKADIQRGMVLAKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRV 1336 QKADIQRGMVL+KPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRV Sbjct: 309 QKADIQRGMVLSKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRV 368 Query: 1337 ASIMNDKDEESKMVMPGDRVKMIVELIMPVACEQGMRFAIREGGKTVGAGVIQSIVE 1507 A+IMNDKDEESKMVMPGDRVKM+VELIMPVACEQGMRFAIREGGKTVGAGVIQSI+E Sbjct: 369 ATIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 425 >ref|XP_003525588.1| PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max] Length = 479 Score = 712 bits (1838), Expect = 0.0 Identities = 354/417 (84%), Positives = 376/417 (90%) Frame = +2 Query: 257 RGRSLTVRAARGKFERKKPHVNIGTIGHVDHGKXXXXXXXXXXXXSIGGSASKKYDEIDA 436 R RS TVRAARGKFERKKPHVNIGTIGHVDHGK S+G SA KKYDEIDA Sbjct: 63 RRRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASLGNSAPKKYDEIDA 122 Query: 437 APEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 616 APEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP Sbjct: 123 APEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 182 Query: 617 MPQTKEHILLAKQVGVPNMVVFLNKQDQXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIIS 796 MPQTKEHILLAKQVGVPN+VVFLNKQDQ S YEFPGDDVPIIS Sbjct: 183 MPQTKEHILLAKQVGVPNIVVFLNKQDQVDDEELLQLVELEVRELLSKYEFPGDDVPIIS 242 Query: 797 GSALLALEALMANPAIKKGDNTWVDKIYALMDAVDDYIPIPQRQTELPFLLAVEDVFSIT 976 GSALL+LEALMANPAIK+G+N WVDKIY LM+AVDDYIPIPQRQTELPFLLA+EDVF+IT Sbjct: 243 GSALLSLEALMANPAIKRGENQWVDKIYELMEAVDDYIPIPQRQTELPFLLAIEDVFTIT 302 Query: 977 GRGTVATGRVERGTVRVGETVELIGLRETRNTTVTGVEMFQKILDEALAGDNVGILLRGI 1156 GRGTVATGRVERGT+RVGETV+++G++ETRNTTVTGVEMFQKILDEALAGDNVG+LLRGI Sbjct: 303 GRGTVATGRVERGTIRVGETVDIVGVKETRNTTVTGVEMFQKILDEALAGDNVGLLLRGI 362 Query: 1157 QKADIQRGMVLAKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRV 1336 QK DIQRGMVLAKPG+ITPHTKF AIVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG+V Sbjct: 363 QKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKV 422 Query: 1337 ASIMNDKDEESKMVMPGDRVKMIVELIMPVACEQGMRFAIREGGKTVGAGVIQSIVE 1507 IMNDKDEESKMVMPGDRVK++VELI+PVACEQGMRFAIREGGKTVGAGVIQSI+E Sbjct: 423 TEIMNDKDEESKMVMPGDRVKLVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479 >ref|XP_003523105.1| PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max] Length = 480 Score = 712 bits (1837), Expect = 0.0 Identities = 355/415 (85%), Positives = 374/415 (90%) Frame = +2 Query: 263 RSLTVRAARGKFERKKPHVNIGTIGHVDHGKXXXXXXXXXXXXSIGGSASKKYDEIDAAP 442 R LTVRAARGKFERKKPHVNIGTIGHVDHGK ++G SA KKYDEIDAAP Sbjct: 66 RPLTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALAALGNSAPKKYDEIDAAP 125 Query: 443 EERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 622 EERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP Sbjct: 126 EERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 185 Query: 623 QTKEHILLAKQVGVPNMVVFLNKQDQXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGS 802 QTKEHILLAKQVGVPNMVVFLNKQDQ +SYEFPGDD PI+SGS Sbjct: 186 QTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRDLLTSYEFPGDDTPIVSGS 245 Query: 803 ALLALEALMANPAIKKGDNTWVDKIYALMDAVDDYIPIPQRQTELPFLLAVEDVFSITGR 982 ALLALEALMANPAIK+GDN WVDKIY LMD VDDYIPIPQRQT+LPFLLAVEDVFSITGR Sbjct: 246 ALLALEALMANPAIKRGDNEWVDKIYKLMDEVDDYIPIPQRQTDLPFLLAVEDVFSITGR 305 Query: 983 GTVATGRVERGTVRVGETVELIGLRETRNTTVTGVEMFQKILDEALAGDNVGILLRGIQK 1162 GTVATGRVERGTV+VGETV+L+GLRETRNTTVTGVEMFQKILDEALAGDNVG+LLRG+QK Sbjct: 306 GTVATGRVERGTVKVGETVDLVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 365 Query: 1163 ADIQRGMVLAKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVAS 1342 DIQRGMVLAKPG+ITPHTKF AIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG+V + Sbjct: 366 TDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTA 425 Query: 1343 IMNDKDEESKMVMPGDRVKMIVELIMPVACEQGMRFAIREGGKTVGAGVIQSIVE 1507 I ND+DEES+MVMPGDRVKM+VELI+PVACEQGMRFAIREGGKTVGAGVIQSI+E Sbjct: 426 ITNDRDEESQMVMPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 480