BLASTX nr result

ID: Coptis24_contig00002897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002897
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537192.1| PREDICTED: uncharacterized protein LOC100812...    63   1e-07
ref|XP_002274395.1| PREDICTED: uncharacterized protein LOC100248...    60   7e-07
ref|XP_002309041.1| predicted protein [Populus trichocarpa] gi|2...    57   4e-06

>ref|XP_003537192.1| PREDICTED: uncharacterized protein LOC100812338 [Glycine max]
          Length = 239

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 30/46 (65%), Positives = 35/46 (76%)
 Frame = +1

Query: 10  KLVSAMKGNRERQEPHEKFLTVRWAPDVYDPPVTSLSHTVKGYSQQ 147
           KLVSAMKG+RE++   +  LTV+WAPDVYDP  T LSHTVK   QQ
Sbjct: 116 KLVSAMKGSREKERGSQMKLTVKWAPDVYDPVPTLLSHTVKNKKQQ 161


>ref|XP_002274395.1| PREDICTED: uncharacterized protein LOC100248230 isoform 3 [Vitis
           vinifera] gi|225439745|ref|XP_002274341.1| PREDICTED:
           uncharacterized protein LOC100248230 isoform 1 [Vitis
           vinifera] gi|147801762|emb|CAN77855.1| hypothetical
           protein VITISV_037693 [Vitis vinifera]
           gi|297741478|emb|CBI32610.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 29/49 (59%), Positives = 36/49 (73%)
 Frame = +1

Query: 1   TSLKLVSAMKGNRERQEPHEKFLTVRWAPDVYDPPVTSLSHTVKGYSQQ 147
           T LKLVSAMKG+R+++    K L V WAPDVYDPP T +SHTV+   +Q
Sbjct: 151 TPLKLVSAMKGSRDKEGIPLKKLNVTWAPDVYDPPPTIVSHTVRNCKKQ 199


>ref|XP_002309041.1| predicted protein [Populus trichocarpa] gi|222855017|gb|EEE92564.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = +1

Query: 1   TSLKLVSAMKGNRERQEPHEKFLTVRWAPDVYDPPVTSLSHTVK 132
           T L +VSAMKG+RE+Q    + LTV WAPDVYDP   SLSH+VK
Sbjct: 94  TRLPIVSAMKGSREKQGGSPRKLTVSWAPDVYDPIPNSLSHSVK 137


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