BLASTX nr result

ID: Coptis24_contig00002896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002896
         (3952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514234.1| Golgin-84, putative [Ricinus communis] gi|22...   441   e-120
emb|CBI28011.3| unnamed protein product [Vitis vinifera]              435   e-119
ref|XP_002280503.1| PREDICTED: golgin candidate 1-like [Vitis vi...   435   e-119
ref|XP_004150848.1| PREDICTED: golgin candidate 1-like [Cucumis ...   431   e-118
ref|XP_003517645.1| PREDICTED: golgin candidate 1-like [Glycine ...   429   e-117

>ref|XP_002514234.1| Golgin-84, putative [Ricinus communis] gi|223546690|gb|EEF48188.1|
            Golgin-84, putative [Ricinus communis]
          Length = 717

 Score =  441 bits (1133), Expect = e-120
 Identities = 236/336 (70%), Positives = 257/336 (76%), Gaps = 7/336 (2%)
 Frame = +3

Query: 2637 NMESIMRNRELT*TWMMQALREELGSADRKAEEERAAHNATKMAAMEREVSLEHRAVEAS 2816
            NMESIMRNRELT T MMQALREEL SA+R+AEEERAAHNATKMAAMEREV LEHRAVEAS
Sbjct: 382  NMESIMRNRELTETRMMQALREELSSAERRAEEERAAHNATKMAAMEREVELEHRAVEAS 441

Query: 2817 TALARMQRAVDERTSKVXXXXXXXXXXXXXXXXXXXXXQDMEVRVRRGQKKPTEEANQAL 2996
            TALAR+QR  DERT+K                      QDME RVRRGQKK  EEANQ +
Sbjct: 442  TALARIQRIADERTAKAAELEQKVALLEVECASLNQELQDMETRVRRGQKKSPEEANQVI 501

Query: 2997 QMQAWQEEVDRARQGQRDAESKVSSLEAQVQKMRVEMAGMKRDAEHYSRQEHMELEKRYR 3176
            QMQAWQEEV+RARQGQRDAE+K+SS EA++QKMRVEMA MKRDAEHYSRQEHMELEKRYR
Sbjct: 502  QMQAWQEEVERARQGQRDAENKLSSTEAELQKMRVEMAAMKRDAEHYSRQEHMELEKRYR 561

Query: 3177 ELTDLLYHKQTQLEAMASEKSAAEFQLEKEVKRL-------QXXXXXXXXXXXXXXXXYW 3335
            ELTDLLY+KQTQLEAMASEK+AAEFQLEKEVKR+       +                 W
Sbjct: 562  ELTDLLYYKQTQLEAMASEKAAAEFQLEKEVKRIKKXXIDVKQIEAERSRVSRRASSSSW 621

Query: 3336 EEDTDLKALEPLPLHHRHIAGASXXXXXXXXXXDSGAVTATRFLWRYPIARVILLCYMVF 3515
            EED+++KALEPLPLHHRH+A AS          DSGA  ATRFLWRYP AR+ILL Y+VF
Sbjct: 622  EEDSEMKALEPLPLHHRHMAVASMQLQKAAKLLDSGAARATRFLWRYPTARLILLFYLVF 681

Query: 3516 VHLFLMYLLHRLQAQADSFSAQEVAASMGLTNPTLP 3623
            VHLFLMYLLHRLQ QAD  SA+EVA SMGL  PTLP
Sbjct: 682  VHLFLMYLLHRLQEQADDLSAREVAQSMGLATPTLP 717


>emb|CBI28011.3| unnamed protein product [Vitis vinifera]
          Length = 712

 Score =  435 bits (1119), Expect = e-119
 Identities = 230/330 (69%), Positives = 255/330 (77%), Gaps = 1/330 (0%)
 Frame = +3

Query: 2637 NMESIMRNRELT*TWMMQALREELGSADRKAEEERAAHNATKMAAMEREVSLEHRAVEAS 2816
            NMESIMRNRELT T MMQALREEL SA+R+AEEERAAH+ATKMAAMEREV LEH+AVEAS
Sbjct: 383  NMESIMRNRELTETRMMQALREELASAERRAEEERAAHHATKMAAMEREVELEHQAVEAS 442

Query: 2817 TALARMQRAVDERTSKVXXXXXXXXXXXXXXXXXXXXXQDMEVRVRRGQKKPTEEANQAL 2996
            TALAR+QR  DERT+K                       DME R RRGQKK  EEANQ +
Sbjct: 443  TALARIQRVADERTAKAAEFEQKVALLEVECATLNQELHDMEARARRGQKKSPEEANQVI 502

Query: 2997 QMQAWQEEVDRARQGQRDAESKVSSLEAQVQKMRVEMAGMKRDAEHYSRQEHMELEKRYR 3176
            QMQAWQEEV+RARQGQRDAE+K+SS+EA++QKMRVEMA MKRDAEHYSRQEHMELEKRYR
Sbjct: 503  QMQAWQEEVERARQGQRDAEAKLSSMEAELQKMRVEMAAMKRDAEHYSRQEHMELEKRYR 562

Query: 3177 ELTDLLYHKQTQLEAMASEKSAAEFQLEKEVKRL-QXXXXXXXXXXXXXXXXYWEEDTDL 3353
            ELTDLLY+KQTQLEAMASEK+AA FQLEKEVKRL +                 WE+DTD+
Sbjct: 563  ELTDLLYNKQTQLEAMASEKAAAGFQLEKEVKRLKEAQVEAERSRTSRRGSASWEDDTDI 622

Query: 3354 KALEPLPLHHRHIAGASXXXXXXXXXXDSGAVTATRFLWRYPIARVILLCYMVFVHLFLM 3533
            KALEPLPLHHRH+A AS          DSGAV ATRFLWRYP AR++LL Y+VFVHLFLM
Sbjct: 623  KALEPLPLHHRHMAAASIQLQKAAKLLDSGAVRATRFLWRYPTARLLLLFYLVFVHLFLM 682

Query: 3534 YLLHRLQAQADSFSAQEVAASMGLTNPTLP 3623
            YLLH LQ QAD  +++EVA SMGL  PTLP
Sbjct: 683  YLLHHLQEQADELASREVAQSMGLATPTLP 712


>ref|XP_002280503.1| PREDICTED: golgin candidate 1-like [Vitis vinifera]
          Length = 694

 Score =  435 bits (1119), Expect = e-119
 Identities = 230/330 (69%), Positives = 255/330 (77%), Gaps = 1/330 (0%)
 Frame = +3

Query: 2637 NMESIMRNRELT*TWMMQALREELGSADRKAEEERAAHNATKMAAMEREVSLEHRAVEAS 2816
            NMESIMRNRELT T MMQALREEL SA+R+AEEERAAH+ATKMAAMEREV LEH+AVEAS
Sbjct: 365  NMESIMRNRELTETRMMQALREELASAERRAEEERAAHHATKMAAMEREVELEHQAVEAS 424

Query: 2817 TALARMQRAVDERTSKVXXXXXXXXXXXXXXXXXXXXXQDMEVRVRRGQKKPTEEANQAL 2996
            TALAR+QR  DERT+K                       DME R RRGQKK  EEANQ +
Sbjct: 425  TALARIQRVADERTAKAAEFEQKVALLEVECATLNQELHDMEARARRGQKKSPEEANQVI 484

Query: 2997 QMQAWQEEVDRARQGQRDAESKVSSLEAQVQKMRVEMAGMKRDAEHYSRQEHMELEKRYR 3176
            QMQAWQEEV+RARQGQRDAE+K+SS+EA++QKMRVEMA MKRDAEHYSRQEHMELEKRYR
Sbjct: 485  QMQAWQEEVERARQGQRDAEAKLSSMEAELQKMRVEMAAMKRDAEHYSRQEHMELEKRYR 544

Query: 3177 ELTDLLYHKQTQLEAMASEKSAAEFQLEKEVKRL-QXXXXXXXXXXXXXXXXYWEEDTDL 3353
            ELTDLLY+KQTQLEAMASEK+AA FQLEKEVKRL +                 WE+DTD+
Sbjct: 545  ELTDLLYNKQTQLEAMASEKAAAGFQLEKEVKRLKEAQVEAERSRTSRRGSASWEDDTDI 604

Query: 3354 KALEPLPLHHRHIAGASXXXXXXXXXXDSGAVTATRFLWRYPIARVILLCYMVFVHLFLM 3533
            KALEPLPLHHRH+A AS          DSGAV ATRFLWRYP AR++LL Y+VFVHLFLM
Sbjct: 605  KALEPLPLHHRHMAAASIQLQKAAKLLDSGAVRATRFLWRYPTARLLLLFYLVFVHLFLM 664

Query: 3534 YLLHRLQAQADSFSAQEVAASMGLTNPTLP 3623
            YLLH LQ QAD  +++EVA SMGL  PTLP
Sbjct: 665  YLLHHLQEQADELASREVAQSMGLATPTLP 694


>ref|XP_004150848.1| PREDICTED: golgin candidate 1-like [Cucumis sativus]
            gi|449488127|ref|XP_004157946.1| PREDICTED: golgin
            candidate 1-like [Cucumis sativus]
          Length = 709

 Score =  431 bits (1108), Expect = e-118
 Identities = 224/331 (67%), Positives = 256/331 (77%), Gaps = 2/331 (0%)
 Frame = +3

Query: 2637 NMESIMRNRELT*TWMMQALREELGSADRKAEEERAAHNATKMAAMEREVSLEHRAVEAS 2816
            NMES+MRNRELT T MMQALREEL SA+R+AEEER+AHNATKMA+MERE+ LEHRA+EA+
Sbjct: 379  NMESVMRNRELTETRMMQALREELASAERRAEEERSAHNATKMASMEREMELEHRAMEAA 438

Query: 2817 TALARMQRAVDERTSKVXXXXXXXXXXXXXXXXXXXXXQDMEVRVRRGQKKPTEEANQAL 2996
            +ALAR+QR  DERTSK                      QD+E R RRGQKK  +EANQ +
Sbjct: 439  SALARIQRVADERTSKATELEQKVALLEVECSSLNQELQDLEARARRGQKKSPDEANQLI 498

Query: 2997 QMQAWQEEVDRARQGQRDAESKVSSLEAQVQKMRVEMAGMKRDAEHYSRQEHMELEKRYR 3176
            QMQAWQEEV+RARQGQRDAE K+SS+EA++QKMRVEMA MKRDAEHYSRQEHMELEKRYR
Sbjct: 499  QMQAWQEEVERARQGQRDAELKLSSMEAELQKMRVEMAAMKRDAEHYSRQEHMELEKRYR 558

Query: 3177 ELTDLLYHKQTQLEAMASEKSAAEFQLEKEVKRLQ--XXXXXXXXXXXXXXXXYWEEDTD 3350
            ELTDLLY+KQTQLEAMASEK+AAEFQLEKE+ R Q                   WEED +
Sbjct: 559  ELTDLLYYKQTQLEAMASEKAAAEFQLEKEINRAQEAQVEVERSRASRRASSASWEEDAE 618

Query: 3351 LKALEPLPLHHRHIAGASXXXXXXXXXXDSGAVTATRFLWRYPIARVILLCYMVFVHLFL 3530
            +K+LEPLPLHHR++ G S          DSGAV ATRFLWRYP AR+ILL Y+VFVHLF+
Sbjct: 619  MKSLEPLPLHHRYMVGTSVQLQKAAKLLDSGAVRATRFLWRYPTARLILLFYLVFVHLFM 678

Query: 3531 MYLLHRLQAQADSFSAQEVAASMGLTNPTLP 3623
            MYLLHRLQAQAD+ +A+EVA SMGLTNP LP
Sbjct: 679  MYLLHRLQAQADTITAREVAESMGLTNPNLP 709


>ref|XP_003517645.1| PREDICTED: golgin candidate 1-like [Glycine max]
          Length = 703

 Score =  429 bits (1104), Expect = e-117
 Identities = 225/330 (68%), Positives = 256/330 (77%), Gaps = 1/330 (0%)
 Frame = +3

Query: 2637 NMESIMRNRELT*TWMMQALREELGSADRKAEEERAAHNATKMAAMEREVSLEHRAVEAS 2816
            +MES+MRNREL+ T MMQALREEL SA+R+AEEERAAHNATKMAAMEREV LEHRAVE+S
Sbjct: 374  SMESMMRNRELSETRMMQALREELASAERRAEEERAAHNATKMAAMEREVELEHRAVESS 433

Query: 2817 TALARMQRAVDERTSKVXXXXXXXXXXXXXXXXXXXXXQDMEVRVRRGQKKPTEEANQAL 2996
            TALAR+QR  DERT+K                      QDME RVRR QKK  EEANQ +
Sbjct: 434  TALARIQRVADERTAKATELEQKVALLEVECASLNQELQDMEARVRREQKKAPEEANQVI 493

Query: 2997 QMQAWQEEVDRARQGQRDAESKVSSLEAQVQKMRVEMAGMKRDAEHYSRQEHMELEKRYR 3176
            QMQAWQEE++RARQGQR+AE+K+SSLEA++QKMRVEMA MKRDAEHYSRQEHMELEKRYR
Sbjct: 494  QMQAWQEELERARQGQREAENKLSSLEAEMQKMRVEMAAMKRDAEHYSRQEHMELEKRYR 553

Query: 3177 ELTDLLYHKQTQLEAMASEKSAAEFQLEKEVKRLQ-XXXXXXXXXXXXXXXXYWEEDTDL 3353
            ELTDLLY+KQTQLE M SEK+AAEFQLEKE+KRLQ                  WE++T++
Sbjct: 554  ELTDLLYYKQTQLETMVSEKAAAEFQLEKEIKRLQEAKAEAERSRVSRRASSSWEDETEI 613

Query: 3354 KALEPLPLHHRHIAGASXXXXXXXXXXDSGAVTATRFLWRYPIARVILLCYMVFVHLFLM 3533
            K+LEPLPLHHRH+ GAS          DSGAV ATRFLW+YP ARVIL  Y+VFVHLFLM
Sbjct: 614  KSLEPLPLHHRHLVGASIQLQKAVKLLDSGAVRATRFLWQYPTARVILFFYLVFVHLFLM 673

Query: 3534 YLLHRLQAQADSFSAQEVAASMGLTNPTLP 3623
            YLLHRLQ QAD+ +A+EVA SMGL+N  LP
Sbjct: 674  YLLHRLQVQADTLAAREVAESMGLSNQNLP 703


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