BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002893
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteo...   185   4e-45
ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteo...   184   5e-45
ref|XP_003518640.1| PREDICTED: ATP-dependent Clp protease proteo...   184   5e-45
gb|ACU22868.1| unknown [Glycine max]                                  184   5e-45
gb|ACU19554.1| unknown [Glycine max]                                  182   2e-44

>ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic [Vitis vinifera]
          Length = 320

 Score =  185 bits (469), Expect = 4e-45
 Identities = 97/134 (72%), Positives = 103/134 (76%)
 Frame = -2

Query: 404 APEWMPRPEELDANNMLLRQRIVFLGSQVDDVTADYIISQLLFLDAEDNTKDIKLFINSP 225
           AP W+PR E+LD  NMLLRQRIVFLGSQVDD+TAD +ISQLLFLDAED  KDIKLFINSP
Sbjct: 70  APTWLPRFEDLDTTNMLLRQRIVFLGSQVDDMTADLVISQLLFLDAEDQEKDIKLFINSP 129

Query: 224 GGSVTAGMGIYDAXXXXXXXXXXXXXXXXXGMGIYDAMKMCKADVSTVCLGLAASMGAFL 45
           GGSVTAG                        +GIYDAMK+CKADVSTVCLGLAASMGAFL
Sbjct: 130 GGSVTAG------------------------LGIYDAMKLCKADVSTVCLGLAASMGAFL 165

Query: 44  LASGSKGKRFCMPN 3
           LASGSKGKRFCMPN
Sbjct: 166 LASGSKGKRFCMPN 179


>ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Glycine max]
          Length = 322

 Score =  184 bits (468), Expect = 5e-45
 Identities = 96/134 (71%), Positives = 105/134 (78%)
 Frame = -2

Query: 404 APEWMPRPEELDANNMLLRQRIVFLGSQVDDVTADYIISQLLFLDAEDNTKDIKLFINSP 225
           A  W+PR EELDA NMLLRQRI+FLGSQVDD+TAD+IISQLLFLDAED+ KDIKLFINSP
Sbjct: 69  ASPWLPRFEELDATNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSKKDIKLFINSP 128

Query: 224 GGSVTAGMGIYDAXXXXXXXXXXXXXXXXXGMGIYDAMKMCKADVSTVCLGLAASMGAFL 45
           GGSVTAGM                        GIYDAMK+CKADVSTVCLGLAASMGAF+
Sbjct: 129 GGSVTAGM------------------------GIYDAMKLCKADVSTVCLGLAASMGAFI 164

Query: 44  LASGSKGKRFCMPN 3
           LASG+KGKR+CMPN
Sbjct: 165 LASGTKGKRYCMPN 178


>ref|XP_003518640.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Glycine max]
          Length = 319

 Score =  184 bits (468), Expect = 5e-45
 Identities = 96/134 (71%), Positives = 105/134 (78%)
 Frame = -2

Query: 404 APEWMPRPEELDANNMLLRQRIVFLGSQVDDVTADYIISQLLFLDAEDNTKDIKLFINSP 225
           A  W+PR EELDA NMLLRQRI+FLGSQVDD+TAD+IISQLLFLDAED+ KDIKLFINSP
Sbjct: 69  ASPWLPRFEELDATNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSKKDIKLFINSP 128

Query: 224 GGSVTAGMGIYDAXXXXXXXXXXXXXXXXXGMGIYDAMKMCKADVSTVCLGLAASMGAFL 45
           GGSVTAGM                        GIYDAMK+CKADVSTVCLGLAASMGAF+
Sbjct: 129 GGSVTAGM------------------------GIYDAMKLCKADVSTVCLGLAASMGAFI 164

Query: 44  LASGSKGKRFCMPN 3
           LASG+KGKR+CMPN
Sbjct: 165 LASGTKGKRYCMPN 178


>gb|ACU22868.1| unknown [Glycine max]
          Length = 270

 Score =  184 bits (468), Expect = 5e-45
 Identities = 96/134 (71%), Positives = 105/134 (78%)
 Frame = -2

Query: 404 APEWMPRPEELDANNMLLRQRIVFLGSQVDDVTADYIISQLLFLDAEDNTKDIKLFINSP 225
           A  W+PR EELDA NMLLRQRI+FLGSQVDD+TAD+IISQLLFLDAED+ KDIKLFINSP
Sbjct: 69  ASPWLPRFEELDATNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSKKDIKLFINSP 128

Query: 224 GGSVTAGMGIYDAXXXXXXXXXXXXXXXXXGMGIYDAMKMCKADVSTVCLGLAASMGAFL 45
           GGSVTAGM                        GIYDAMK+CKADVSTVCLGLAASMGAF+
Sbjct: 129 GGSVTAGM------------------------GIYDAMKLCKADVSTVCLGLAASMGAFI 164

Query: 44  LASGSKGKRFCMPN 3
           LASG+KGKR+CMPN
Sbjct: 165 LASGTKGKRYCMPN 178


>gb|ACU19554.1| unknown [Glycine max]
          Length = 322

 Score =  182 bits (463), Expect = 2e-44
 Identities = 95/134 (70%), Positives = 104/134 (77%)
 Frame = -2

Query: 404 APEWMPRPEELDANNMLLRQRIVFLGSQVDDVTADYIISQLLFLDAEDNTKDIKLFINSP 225
           A  W+PR EELDA NMLLRQRI+FLGSQVDD+TAD+IISQLLFLDAED+ KDIKLFIN P
Sbjct: 69  ASPWLPRFEELDATNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSKKDIKLFINPP 128

Query: 224 GGSVTAGMGIYDAXXXXXXXXXXXXXXXXXGMGIYDAMKMCKADVSTVCLGLAASMGAFL 45
           GGSVTAGM                        GIYDAMK+CKADVSTVCLGLAASMGAF+
Sbjct: 129 GGSVTAGM------------------------GIYDAMKLCKADVSTVCLGLAASMGAFI 164

Query: 44  LASGSKGKRFCMPN 3
           LASG+KGKR+CMPN
Sbjct: 165 LASGTKGKRYCMPN 178