BLASTX nr result

ID: Coptis24_contig00002892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002892
         (1134 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47979.1| unknown [Lotus japonicus]                              383   e-104
ref|XP_003532074.1| PREDICTED: oxygen-evolving enhancer protein ...   383   e-104
ref|XP_002300858.1| hypothetical protein POPTRDRAFT_551203 [Popu...   381   e-103
gb|AFK44592.1| unknown [Lotus japonicus]                              381   e-103
sp|P12302.1|PSBP_SPIOL RecName: Full=Oxygen-evolving enhancer pr...   378   e-102

>gb|AFK47979.1| unknown [Lotus japonicus]
          Length = 259

 Score =  383 bits (983), Expect = e-104
 Identities = 189/262 (72%), Positives = 221/262 (84%)
 Frame = -3

Query: 916 SSTACFLHHHALXXXXXXXXXXXRQVSCIKPNQLVVRAQKQSSEDVEATPAVSRRLALSV 737
           +ST CFLHHHAL            QV  IKPNQ+V RAQKQ  +DVE    VSRRLAL++
Sbjct: 2   ASTQCFLHHHALTTPTRTSSQR--QVVSIKPNQIVCRAQKQ--QDVEDVSPVSRRLALTL 57

Query: 736 LIGAAAIGTKVSPADAAYGEAANVFGKPKTNTEYIPIIRDNFKITVPAKWNPSKEVEYPG 557
           LIGAAA+G+KVSPADAAYGEAANVFGKPK+NT+++P   D FK+++PAKWNPSKE E+PG
Sbjct: 58  LIGAAAVGSKVSPADAAYGEAANVFGKPKSNTDFLPYNGDGFKLSIPAKWNPSKEREFPG 117

Query: 556 QVLKYEDNFDSNSNVNVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYFGATDSEGGFD 377
           QVL+YEDNFD+ SNV+V+IT T KKSI DYGSPEEFL++VDYLLGKQA+FG TDSEGGFD
Sbjct: 118 QVLRYEDNFDATSNVSVIITATDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTDSEGGFD 177

Query: 376 TGSVATANILETSTQVINGKQYYKLSILTRTADGDEGGKHQLISATVSDGKLYICKAQAG 197
           T +VA ANILE+S  V+ GKQYY +S+LTRTADGDEGGKHQ+I+ATV+DGKLYICKAQAG
Sbjct: 178 TNAVAVANILESSAPVVGGKQYYNVSVLTRTADGDEGGKHQIITATVNDGKLYICKAQAG 237

Query: 196 DKRWFKGAKKFVEGTTSSFNVA 131
           DKRWFKGA+KFVE   SSF+VA
Sbjct: 238 DKRWFKGARKFVESAASSFSVA 259


>ref|XP_003532074.1| PREDICTED: oxygen-evolving enhancer protein 2, chloroplastic-like
           [Glycine max]
          Length = 262

 Score =  383 bits (983), Expect = e-104
 Identities = 190/263 (72%), Positives = 221/263 (84%), Gaps = 1/263 (0%)
 Frame = -3

Query: 916 SSTACFLHHHALXXXXXXXXXXXRQVSCIKPNQLVVRAQKQSSEDVE-ATPAVSRRLALS 740
           +ST CFLHHHAL             V   KPN +V +AQKQ  ++ E  T  VSRRLAL+
Sbjct: 2   ASTQCFLHHHALTTPTRASSQRL--VVSTKPNHIVCKAQKQVVQEGEDTTNIVSRRLALT 59

Query: 739 VLIGAAAIGTKVSPADAAYGEAANVFGKPKTNTEYIPIIRDNFKITVPAKWNPSKEVEYP 560
           VLIGAAA+G+KV+PADAAYGEAANVFGKPKTNT+++P   D FK+++P+KWNPSKEVEYP
Sbjct: 60  VLIGAAAVGSKVAPADAAYGEAANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEVEYP 119

Query: 559 GQVLKYEDNFDSNSNVNVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYFGATDSEGGF 380
           GQVL+YEDNFDS SNV VM+T T KKSI DYGSPEEFL+QVDYLLGKQA+FG TD+EGGF
Sbjct: 120 GQVLRYEDNFDSTSNVAVMVTATDKKSITDYGSPEEFLSQVDYLLGKQAFFGQTDAEGGF 179

Query: 379 DTGSVATANILETSTQVINGKQYYKLSILTRTADGDEGGKHQLISATVSDGKLYICKAQA 200
           D+ +VATANILE+ST VI+GKQYY L++LTRTADGDEGGKHQLI+ATV DGKLYICKAQA
Sbjct: 180 DSNAVATANILESSTPVIDGKQYYSLTVLTRTADGDEGGKHQLIAATVKDGKLYICKAQA 239

Query: 199 GDKRWFKGAKKFVEGTTSSFNVA 131
           GDKRWFKGA++FVE T SSF+VA
Sbjct: 240 GDKRWFKGARRFVESTASSFSVA 262


>ref|XP_002300858.1| hypothetical protein POPTRDRAFT_551203 [Populus trichocarpa]
           gi|118487448|gb|ABK95552.1| unknown [Populus
           trichocarpa] gi|222842584|gb|EEE80131.1| hypothetical
           protein POPTRDRAFT_551203 [Populus trichocarpa]
          Length = 262

 Score =  381 bits (979), Expect = e-103
 Identities = 191/262 (72%), Positives = 222/262 (84%)
 Frame = -3

Query: 916 SSTACFLHHHALXXXXXXXXXXXRQVSCIKPNQLVVRAQKQSSEDVEATPAVSRRLALSV 737
           +STACFLHHHAL           RQV  +KP QLV RAQKQ+ ++ E    VSRRLAL+V
Sbjct: 2   ASTACFLHHHALTTPARSTSSSQRQVVNLKPAQLVCRAQKQAVQE-EDDGVVSRRLALTV 60

Query: 736 LIGAAAIGTKVSPADAAYGEAANVFGKPKTNTEYIPIIRDNFKITVPAKWNPSKEVEYPG 557
           LIGAAA+G+KV+PADAAYGE+AN+FGKPKTNT+++P   D FK++VPAKWNPSKE E+PG
Sbjct: 61  LIGAAALGSKVAPADAAYGESANIFGKPKTNTDFLPYNGDGFKLSVPAKWNPSKEREFPG 120

Query: 556 QVLKYEDNFDSNSNVNVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYFGATDSEGGFD 377
           QVL+YEDNFD+ SN++VM+TPT  KSIADYGSPEEFL++VDYLLGKQ+   AT SEGGFD
Sbjct: 121 QVLRYEDNFDATSNLSVMVTPTDTKSIADYGSPEEFLSKVDYLLGKQSSLFATSSEGGFD 180

Query: 376 TGSVATANILETSTQVINGKQYYKLSILTRTADGDEGGKHQLISATVSDGKLYICKAQAG 197
           T +VATANILETST VI+GKQYY LS+LTRTADGDEGGKHQLI+ATV DGKLYICKAQAG
Sbjct: 181 TNTVATANILETSTPVIDGKQYYFLSVLTRTADGDEGGKHQLITATVKDGKLYICKAQAG 240

Query: 196 DKRWFKGAKKFVEGTTSSFNVA 131
           DKRWFKGA+KFVE   SSF+VA
Sbjct: 241 DKRWFKGARKFVESAASSFSVA 262


>gb|AFK44592.1| unknown [Lotus japonicus]
          Length = 259

 Score =  381 bits (978), Expect = e-103
 Identities = 188/262 (71%), Positives = 220/262 (83%)
 Frame = -3

Query: 916 SSTACFLHHHALXXXXXXXXXXXRQVSCIKPNQLVVRAQKQSSEDVEATPAVSRRLALSV 737
           +ST CFLHHHAL            QV  IKPNQ+V RAQKQ  +DVE    VSRRLAL++
Sbjct: 2   ASTQCFLHHHALTTPTRTSSQR--QVVSIKPNQIVCRAQKQ--QDVEDVSPVSRRLALTL 57

Query: 736 LIGAAAIGTKVSPADAAYGEAANVFGKPKTNTEYIPIIRDNFKITVPAKWNPSKEVEYPG 557
           LIGAAA+G+KVSPADAAYGEAANVFGKPK+NT+++P   D FK+++PAKWNPSKE E+PG
Sbjct: 58  LIGAAAVGSKVSPADAAYGEAANVFGKPKSNTDFLPYNGDGFKLSIPAKWNPSKEREFPG 117

Query: 556 QVLKYEDNFDSNSNVNVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYFGATDSEGGFD 377
           QVL+YEDNFD+ SNV+V+IT T KKSI DYGSPEEFL++VDYLLGKQA+FG TDSEGGFD
Sbjct: 118 QVLRYEDNFDATSNVSVIITATDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTDSEGGFD 177

Query: 376 TGSVATANILETSTQVINGKQYYKLSILTRTADGDEGGKHQLISATVSDGKLYICKAQAG 197
             +VA ANILE+S  V+ GKQYY +S+LTRTADGDEGGKHQ+I+ATV+DGKLYICKAQAG
Sbjct: 178 ANAVAVANILESSAPVVGGKQYYNVSVLTRTADGDEGGKHQIITATVNDGKLYICKAQAG 237

Query: 196 DKRWFKGAKKFVEGTTSSFNVA 131
           DKRWFKGA+KFVE   SSF+VA
Sbjct: 238 DKRWFKGARKFVESAASSFSVA 259


>sp|P12302.1|PSBP_SPIOL RecName: Full=Oxygen-evolving enhancer protein 2, chloroplastic;
           Short=OEE2; AltName: Full=23 kDa subunit of oxygen
           evolving system of photosystem II; AltName: Full=23 kDa
           thylakoid membrane protein; AltName: Full=OEC 23 kDa
           subunit; Flags: Precursor gi|21265|emb|CAA29055.1| 23
           kDa OEC protein [Spinacia oleracea]
           gi|225596|prf||1307179A luminal protein 23kD
          Length = 267

 Score =  378 bits (971), Expect = e-102
 Identities = 185/266 (69%), Positives = 218/266 (81%), Gaps = 4/266 (1%)
 Frame = -3

Query: 916 SSTACFLHHHALXXXXXXXXXXXRQ---VSCIKPNQLVVRAQKQSSEDVEA-TPAVSRRL 749
           +STACFLHHHA             Q      IKPNQ+V +AQKQ   +       VSRRL
Sbjct: 2   ASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDDNEANVLNSGVSRRL 61

Query: 748 ALSVLIGAAAIGTKVSPADAAYGEAANVFGKPKTNTEYIPIIRDNFKITVPAKWNPSKEV 569
           AL+VLIGAAA+G+KVSPADAAYGEAANVFGKPK NTE++P   D FK+ VP+KWNPSKE 
Sbjct: 62  ALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEK 121

Query: 568 EYPGQVLKYEDNFDSNSNVNVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYFGATDSE 389
           E+PGQVL+YEDNFD+ SN++V++ PT KKSI D+GSPE+FL+QVDYLLGKQAYFG TDSE
Sbjct: 122 EFPGQVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPEDFLSQVDYLLGKQAYFGKTDSE 181

Query: 388 GGFDTGSVATANILETSTQVINGKQYYKLSILTRTADGDEGGKHQLISATVSDGKLYICK 209
           GGFD+G VA+AN+LE+ST V++GKQYY +++LTRTADGDEGGKHQ+I+ATV DGKLYICK
Sbjct: 182 GGFDSGVVASANVLESSTPVVDGKQYYSITVLTRTADGDEGGKHQVIAATVKDGKLYICK 241

Query: 208 AQAGDKRWFKGAKKFVEGTTSSFNVA 131
           AQAGDKRWFKGAKKFVE  TSSF+VA
Sbjct: 242 AQAGDKRWFKGAKKFVESATSSFSVA 267


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