BLASTX nr result

ID: Coptis24_contig00002889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002889
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278440.2| PREDICTED: uncharacterized protein LOC100267...   129   4e-28
emb|CBI27085.3| unnamed protein product [Vitis vinifera]              129   4e-28
emb|CAN74876.1| hypothetical protein VITISV_038923 [Vitis vinifera]   129   4e-28
ref|XP_002525972.1| nucleic acid binding protein, putative [Rici...   122   4e-26
ref|XP_002279557.2| PREDICTED: uncharacterized protein LOC100247...   121   8e-26

>ref|XP_002278440.2| PREDICTED: uncharacterized protein LOC100267904 [Vitis vinifera]
          Length = 576

 Score =  129 bits (323), Expect = 4e-28
 Identities = 62/95 (65%), Positives = 74/95 (77%)
 Frame = -2

Query: 285 LVSMQLC*SLCRGLDTQEASCCFNCGSYSHSLKDCRKPRDNAAVDNARKEHQSKRNQTVG 106
           L SM    +L RGL+T +AS CFNCGSY+HSLK+C KPRD  AV+NARK+HQSKRNQ VG
Sbjct: 217 LTSMDDLNNLERGLETLDASRCFNCGSYNHSLKECPKPRDTVAVNNARKQHQSKRNQPVG 276

Query: 105 SRSTPRYYQSSHGGKYDEIRPGVLSSETRQLLGLG 1
            R   RYYQ+S GGKYD ++PGVL  ETR++L LG
Sbjct: 277 PRIATRYYQNSPGGKYDGLKPGVLGPETRKILNLG 311


>emb|CBI27085.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  129 bits (323), Expect = 4e-28
 Identities = 62/95 (65%), Positives = 74/95 (77%)
 Frame = -2

Query: 285 LVSMQLC*SLCRGLDTQEASCCFNCGSYSHSLKDCRKPRDNAAVDNARKEHQSKRNQTVG 106
           L SM    +L RGL+T +AS CFNCGSY+HSLK+C KPRD  AV+NARK+HQSKRNQ VG
Sbjct: 108 LTSMDDLNNLERGLETLDASRCFNCGSYNHSLKECPKPRDTVAVNNARKQHQSKRNQPVG 167

Query: 105 SRSTPRYYQSSHGGKYDEIRPGVLSSETRQLLGLG 1
            R   RYYQ+S GGKYD ++PGVL  ETR++L LG
Sbjct: 168 PRIATRYYQNSPGGKYDGLKPGVLGPETRKILNLG 202


>emb|CAN74876.1| hypothetical protein VITISV_038923 [Vitis vinifera]
          Length = 391

 Score =  129 bits (323), Expect = 4e-28
 Identities = 62/95 (65%), Positives = 74/95 (77%)
 Frame = -2

Query: 285 LVSMQLC*SLCRGLDTQEASCCFNCGSYSHSLKDCRKPRDNAAVDNARKEHQSKRNQTVG 106
           L SM    +L RGL+T +AS CFNCGSY+HSLK+C KPRD  AV+NARK+HQSKRNQ VG
Sbjct: 32  LTSMDDLNNLERGLETLDASRCFNCGSYNHSLKECPKPRDTVAVNNARKQHQSKRNQPVG 91

Query: 105 SRSTPRYYQSSHGGKYDEIRPGVLSSETRQLLGLG 1
            R   RYYQ+S GGKYD ++PGVL  ETR++L LG
Sbjct: 92  PRIATRYYQNSPGGKYDGLKPGVLGPETRKILNLG 126


>ref|XP_002525972.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223534704|gb|EEF36396.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 693

 Score =  122 bits (306), Expect = 4e-26
 Identities = 55/78 (70%), Positives = 68/78 (87%)
 Frame = -2

Query: 234 EASCCFNCGSYSHSLKDCRKPRDNAAVDNARKEHQSKRNQTVGSRSTPRYYQSSHGGKYD 55
           EA+ CFNCGSYSH+LK+C KPR+NAAV+NARK+H+SKRNQ  GSR+  RYYQSS GGKY+
Sbjct: 376 EAARCFNCGSYSHALKECPKPRNNAAVNNARKQHKSKRNQNAGSRNGTRYYQSSSGGKYE 435

Query: 54  EIRPGVLSSETRQLLGLG 1
            ++PG L +ETR+LLGLG
Sbjct: 436 GLKPGSLDAETRRLLGLG 453


>ref|XP_002279557.2| PREDICTED: uncharacterized protein LOC100247996 [Vitis vinifera]
          Length = 575

 Score =  121 bits (303), Expect = 8e-26
 Identities = 54/82 (65%), Positives = 68/82 (82%)
 Frame = -2

Query: 246 LDTQEASCCFNCGSYSHSLKDCRKPRDNAAVDNARKEHQSKRNQTVGSRSTPRYYQSSHG 67
           L+  +AS CFNCGSY+HS+K+C KPRDN AV+NARK+H+S+RNQ  GSR+  RYYQ+S G
Sbjct: 258 LEIIDASRCFNCGSYNHSMKECPKPRDNVAVNNARKQHKSRRNQNPGSRNPTRYYQNSPG 317

Query: 66  GKYDEIRPGVLSSETRQLLGLG 1
           G+YD +RPG L  ETR+LLGLG
Sbjct: 318 GRYDGLRPGALGVETRELLGLG 339


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