BLASTX nr result
ID: Coptis24_contig00002889
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002889 (547 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278440.2| PREDICTED: uncharacterized protein LOC100267... 129 4e-28 emb|CBI27085.3| unnamed protein product [Vitis vinifera] 129 4e-28 emb|CAN74876.1| hypothetical protein VITISV_038923 [Vitis vinifera] 129 4e-28 ref|XP_002525972.1| nucleic acid binding protein, putative [Rici... 122 4e-26 ref|XP_002279557.2| PREDICTED: uncharacterized protein LOC100247... 121 8e-26 >ref|XP_002278440.2| PREDICTED: uncharacterized protein LOC100267904 [Vitis vinifera] Length = 576 Score = 129 bits (323), Expect = 4e-28 Identities = 62/95 (65%), Positives = 74/95 (77%) Frame = -2 Query: 285 LVSMQLC*SLCRGLDTQEASCCFNCGSYSHSLKDCRKPRDNAAVDNARKEHQSKRNQTVG 106 L SM +L RGL+T +AS CFNCGSY+HSLK+C KPRD AV+NARK+HQSKRNQ VG Sbjct: 217 LTSMDDLNNLERGLETLDASRCFNCGSYNHSLKECPKPRDTVAVNNARKQHQSKRNQPVG 276 Query: 105 SRSTPRYYQSSHGGKYDEIRPGVLSSETRQLLGLG 1 R RYYQ+S GGKYD ++PGVL ETR++L LG Sbjct: 277 PRIATRYYQNSPGGKYDGLKPGVLGPETRKILNLG 311 >emb|CBI27085.3| unnamed protein product [Vitis vinifera] Length = 467 Score = 129 bits (323), Expect = 4e-28 Identities = 62/95 (65%), Positives = 74/95 (77%) Frame = -2 Query: 285 LVSMQLC*SLCRGLDTQEASCCFNCGSYSHSLKDCRKPRDNAAVDNARKEHQSKRNQTVG 106 L SM +L RGL+T +AS CFNCGSY+HSLK+C KPRD AV+NARK+HQSKRNQ VG Sbjct: 108 LTSMDDLNNLERGLETLDASRCFNCGSYNHSLKECPKPRDTVAVNNARKQHQSKRNQPVG 167 Query: 105 SRSTPRYYQSSHGGKYDEIRPGVLSSETRQLLGLG 1 R RYYQ+S GGKYD ++PGVL ETR++L LG Sbjct: 168 PRIATRYYQNSPGGKYDGLKPGVLGPETRKILNLG 202 >emb|CAN74876.1| hypothetical protein VITISV_038923 [Vitis vinifera] Length = 391 Score = 129 bits (323), Expect = 4e-28 Identities = 62/95 (65%), Positives = 74/95 (77%) Frame = -2 Query: 285 LVSMQLC*SLCRGLDTQEASCCFNCGSYSHSLKDCRKPRDNAAVDNARKEHQSKRNQTVG 106 L SM +L RGL+T +AS CFNCGSY+HSLK+C KPRD AV+NARK+HQSKRNQ VG Sbjct: 32 LTSMDDLNNLERGLETLDASRCFNCGSYNHSLKECPKPRDTVAVNNARKQHQSKRNQPVG 91 Query: 105 SRSTPRYYQSSHGGKYDEIRPGVLSSETRQLLGLG 1 R RYYQ+S GGKYD ++PGVL ETR++L LG Sbjct: 92 PRIATRYYQNSPGGKYDGLKPGVLGPETRKILNLG 126 >ref|XP_002525972.1| nucleic acid binding protein, putative [Ricinus communis] gi|223534704|gb|EEF36396.1| nucleic acid binding protein, putative [Ricinus communis] Length = 693 Score = 122 bits (306), Expect = 4e-26 Identities = 55/78 (70%), Positives = 68/78 (87%) Frame = -2 Query: 234 EASCCFNCGSYSHSLKDCRKPRDNAAVDNARKEHQSKRNQTVGSRSTPRYYQSSHGGKYD 55 EA+ CFNCGSYSH+LK+C KPR+NAAV+NARK+H+SKRNQ GSR+ RYYQSS GGKY+ Sbjct: 376 EAARCFNCGSYSHALKECPKPRNNAAVNNARKQHKSKRNQNAGSRNGTRYYQSSSGGKYE 435 Query: 54 EIRPGVLSSETRQLLGLG 1 ++PG L +ETR+LLGLG Sbjct: 436 GLKPGSLDAETRRLLGLG 453 >ref|XP_002279557.2| PREDICTED: uncharacterized protein LOC100247996 [Vitis vinifera] Length = 575 Score = 121 bits (303), Expect = 8e-26 Identities = 54/82 (65%), Positives = 68/82 (82%) Frame = -2 Query: 246 LDTQEASCCFNCGSYSHSLKDCRKPRDNAAVDNARKEHQSKRNQTVGSRSTPRYYQSSHG 67 L+ +AS CFNCGSY+HS+K+C KPRDN AV+NARK+H+S+RNQ GSR+ RYYQ+S G Sbjct: 258 LEIIDASRCFNCGSYNHSMKECPKPRDNVAVNNARKQHKSRRNQNPGSRNPTRYYQNSPG 317 Query: 66 GKYDEIRPGVLSSETRQLLGLG 1 G+YD +RPG L ETR+LLGLG Sbjct: 318 GRYDGLRPGALGVETRELLGLG 339