BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002881
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm...   150   2e-34
sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related prote...   144   2e-32
ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-...   143   3e-32
emb|CBI20795.3| unnamed protein product [Vitis vinifera]              143   3e-32
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li...   143   3e-32

>ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
           gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName:
           Full=Retinoblastoma-related protein
           gi|223530511|gb|EEF32393.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1020

 Score =  150 bits (379), Expect = 2e-34
 Identities = 77/118 (65%), Positives = 91/118 (77%)
 Frame = -1

Query: 354 ILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCNMYDTSEDDLRRTLEKTNDLISNI 175
           ILI+HVPVRFRNF + DS RFV+KG KGV+LLASLCN YDTSED+LR+T+EKTN+LI++I
Sbjct: 229 ILIIHVPVRFRNFNLNDSQRFVKKGDKGVDLLASLCNKYDTSEDELRKTMEKTNNLIADI 288

Query: 174 LKKKPTLASECKAKNLDCIDTDGLIYFEDXXXXXXXXXXXSTLEKDYNDTILNKCELD 1
           LKKKP +ASE K +NLD I+TDGLIY+ED             LEKDY D I  K ELD
Sbjct: 289 LKKKPHMASEYKNENLDNINTDGLIYYEDLMEESSLRSSLDILEKDYEDAIRCKGELD 346


>sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related protein
           gi|89111303|dbj|BAE80326.1| retinoblastoma related
           protein [Camellia sinensis]
          Length = 1025

 Score =  144 bits (363), Expect = 2e-32
 Identities = 73/123 (59%), Positives = 90/123 (73%)
 Frame = -1

Query: 369 ILMRVILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCNMYDTSEDDLRRTLEKTND 190
           + +  ILI+H+PVR RNF + DSPRFV KGSKGV+LLASLCN+Y+TSED+LR+T+EK ND
Sbjct: 230 VAILAILIIHIPVRVRNFNLHDSPRFVMKGSKGVDLLASLCNIYETSEDELRKTMEKAND 289

Query: 189 LISNILKKKPTLASECKAKNLDCIDTDGLIYFEDXXXXXXXXXXXSTLEKDYNDTILNKC 10
           LI +ILKK    ASEC+++NL+ I TDGLIYFED           + L KDY D   NK 
Sbjct: 290 LIEDILKKNRRSASECRSENLENIATDGLIYFEDLLDDTSLPSSLNILGKDYADATRNKG 349

Query: 9   ELD 1
           ELD
Sbjct: 350 ELD 352


>ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
          Length = 1002

 Score =  143 bits (361), Expect = 3e-32
 Identities = 72/123 (58%), Positives = 93/123 (75%)
 Frame = -1

Query: 369 ILMRVILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCNMYDTSEDDLRRTLEKTND 190
           I +  ILI+HVP RFRNF I DS RFV+K +KGV+LLASLCN+Y+TSED+LR+T+EK N+
Sbjct: 213 ISILAILIIHVPTRFRNFNIHDSSRFVKKSNKGVDLLASLCNIYNTSEDELRKTMEKANN 272

Query: 189 LISNILKKKPTLASECKAKNLDCIDTDGLIYFEDXXXXXXXXXXXSTLEKDYNDTILNKC 10
           +I++ILKK+P LASEC+ +NL+ ID DGL YF+D           + LEKDY+  I NK 
Sbjct: 273 VIADILKKQPCLASECETENLENIDKDGLTYFKDLMEESSLPSSLNMLEKDYDYMIRNKS 332

Query: 9   ELD 1
           ELD
Sbjct: 333 ELD 335


>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
          Length = 1006

 Score =  143 bits (361), Expect = 3e-32
 Identities = 73/126 (57%), Positives = 96/126 (76%)
 Frame = -1

Query: 378 IVDILMRVILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCNMYDTSEDDLRRTLEK 199
           +V IL   ILILHVP+ FR+F I + PRFV+KG+KG++LLASLC++Y+TSED++R+T+E+
Sbjct: 218 LVSIL--AILILHVPISFRSFTINNYPRFVKKGNKGMDLLASLCDIYETSEDEVRKTMEQ 275

Query: 198 TNDLISNILKKKPTLASECKAKNLDCIDTDGLIYFEDXXXXXXXXXXXSTLEKDYNDTIL 19
           TN +I +ILKKKP LASECK++NL  ID DGL+YFED           + LEKDY+  I 
Sbjct: 276 TNKVIVDILKKKPCLASECKSENLASIDPDGLVYFEDLMDESSLSSSINILEKDYDAAIR 335

Query: 18  NKCELD 1
           NK ELD
Sbjct: 336 NKGELD 341


>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
           gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
           Full=Retinoblastoma-related protein
           gi|359392418|gb|AEV45768.1| RBR protein [Vitis
           pseudoreticulata]
          Length = 1007

 Score =  143 bits (361), Expect = 3e-32
 Identities = 73/126 (57%), Positives = 96/126 (76%)
 Frame = -1

Query: 378 IVDILMRVILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCNMYDTSEDDLRRTLEK 199
           +V IL   ILILHVP+ FR+F I + PRFV+KG+KG++LLASLC++Y+TSED++R+T+E+
Sbjct: 219 LVSIL--AILILHVPISFRSFTINNYPRFVKKGNKGMDLLASLCDIYETSEDEVRKTMEQ 276

Query: 198 TNDLISNILKKKPTLASECKAKNLDCIDTDGLIYFEDXXXXXXXXXXXSTLEKDYNDTIL 19
           TN +I +ILKKKP LASECK++NL  ID DGL+YFED           + LEKDY+  I 
Sbjct: 277 TNKVIVDILKKKPCLASECKSENLASIDPDGLVYFEDLMDESSLSSSINILEKDYDAAIR 336

Query: 18  NKCELD 1
           NK ELD
Sbjct: 337 NKGELD 342