BLASTX nr result
ID: Coptis24_contig00002881
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002881 (687 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm... 150 2e-34 sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related prote... 144 2e-32 ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-... 143 3e-32 emb|CBI20795.3| unnamed protein product [Vitis vinifera] 143 3e-32 ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li... 143 3e-32 >ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis] gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName: Full=Retinoblastoma-related protein gi|223530511|gb|EEF32393.1| conserved hypothetical protein [Ricinus communis] Length = 1020 Score = 150 bits (379), Expect = 2e-34 Identities = 77/118 (65%), Positives = 91/118 (77%) Frame = -1 Query: 354 ILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCNMYDTSEDDLRRTLEKTNDLISNI 175 ILI+HVPVRFRNF + DS RFV+KG KGV+LLASLCN YDTSED+LR+T+EKTN+LI++I Sbjct: 229 ILIIHVPVRFRNFNLNDSQRFVKKGDKGVDLLASLCNKYDTSEDELRKTMEKTNNLIADI 288 Query: 174 LKKKPTLASECKAKNLDCIDTDGLIYFEDXXXXXXXXXXXSTLEKDYNDTILNKCELD 1 LKKKP +ASE K +NLD I+TDGLIY+ED LEKDY D I K ELD Sbjct: 289 LKKKPHMASEYKNENLDNINTDGLIYYEDLMEESSLRSSLDILEKDYEDAIRCKGELD 346 >sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related protein gi|89111303|dbj|BAE80326.1| retinoblastoma related protein [Camellia sinensis] Length = 1025 Score = 144 bits (363), Expect = 2e-32 Identities = 73/123 (59%), Positives = 90/123 (73%) Frame = -1 Query: 369 ILMRVILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCNMYDTSEDDLRRTLEKTND 190 + + ILI+H+PVR RNF + DSPRFV KGSKGV+LLASLCN+Y+TSED+LR+T+EK ND Sbjct: 230 VAILAILIIHIPVRVRNFNLHDSPRFVMKGSKGVDLLASLCNIYETSEDELRKTMEKAND 289 Query: 189 LISNILKKKPTLASECKAKNLDCIDTDGLIYFEDXXXXXXXXXXXSTLEKDYNDTILNKC 10 LI +ILKK ASEC+++NL+ I TDGLIYFED + L KDY D NK Sbjct: 290 LIEDILKKNRRSASECRSENLENIATDGLIYFEDLLDDTSLPSSLNILGKDYADATRNKG 349 Query: 9 ELD 1 ELD Sbjct: 350 ELD 352 >ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max] Length = 1002 Score = 143 bits (361), Expect = 3e-32 Identities = 72/123 (58%), Positives = 93/123 (75%) Frame = -1 Query: 369 ILMRVILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCNMYDTSEDDLRRTLEKTND 190 I + ILI+HVP RFRNF I DS RFV+K +KGV+LLASLCN+Y+TSED+LR+T+EK N+ Sbjct: 213 ISILAILIIHVPTRFRNFNIHDSSRFVKKSNKGVDLLASLCNIYNTSEDELRKTMEKANN 272 Query: 189 LISNILKKKPTLASECKAKNLDCIDTDGLIYFEDXXXXXXXXXXXSTLEKDYNDTILNKC 10 +I++ILKK+P LASEC+ +NL+ ID DGL YF+D + LEKDY+ I NK Sbjct: 273 VIADILKKQPCLASECETENLENIDKDGLTYFKDLMEESSLPSSLNMLEKDYDYMIRNKS 332 Query: 9 ELD 1 ELD Sbjct: 333 ELD 335 >emb|CBI20795.3| unnamed protein product [Vitis vinifera] Length = 1006 Score = 143 bits (361), Expect = 3e-32 Identities = 73/126 (57%), Positives = 96/126 (76%) Frame = -1 Query: 378 IVDILMRVILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCNMYDTSEDDLRRTLEK 199 +V IL ILILHVP+ FR+F I + PRFV+KG+KG++LLASLC++Y+TSED++R+T+E+ Sbjct: 218 LVSIL--AILILHVPISFRSFTINNYPRFVKKGNKGMDLLASLCDIYETSEDEVRKTMEQ 275 Query: 198 TNDLISNILKKKPTLASECKAKNLDCIDTDGLIYFEDXXXXXXXXXXXSTLEKDYNDTIL 19 TN +I +ILKKKP LASECK++NL ID DGL+YFED + LEKDY+ I Sbjct: 276 TNKVIVDILKKKPCLASECKSENLASIDPDGLVYFEDLMDESSLSSSINILEKDYDAAIR 335 Query: 18 NKCELD 1 NK ELD Sbjct: 336 NKGELD 341 >ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera] gi|254789791|sp|A7P514.1|RBR_VITVI RecName: Full=Retinoblastoma-related protein gi|359392418|gb|AEV45768.1| RBR protein [Vitis pseudoreticulata] Length = 1007 Score = 143 bits (361), Expect = 3e-32 Identities = 73/126 (57%), Positives = 96/126 (76%) Frame = -1 Query: 378 IVDILMRVILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCNMYDTSEDDLRRTLEK 199 +V IL ILILHVP+ FR+F I + PRFV+KG+KG++LLASLC++Y+TSED++R+T+E+ Sbjct: 219 LVSIL--AILILHVPISFRSFTINNYPRFVKKGNKGMDLLASLCDIYETSEDEVRKTMEQ 276 Query: 198 TNDLISNILKKKPTLASECKAKNLDCIDTDGLIYFEDXXXXXXXXXXXSTLEKDYNDTIL 19 TN +I +ILKKKP LASECK++NL ID DGL+YFED + LEKDY+ I Sbjct: 277 TNKVIVDILKKKPCLASECKSENLASIDPDGLVYFEDLMDESSLSSSINILEKDYDAAIR 336 Query: 18 NKCELD 1 NK ELD Sbjct: 337 NKGELD 342