BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002874
         (1287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273366.1| PREDICTED: uncharacterized protein LOC100265...   166   2e-38
ref|XP_002331870.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-34
ref|XP_004147401.1| PREDICTED: cold-regulated 413 inner membrane...   148   3e-33
ref|XP_002519745.1| COR414-TM1, putative [Ricinus communis] gi|2...   148   3e-33
ref|NP_973936.1| cold regulated 314 thylakoid membrane 2 [Arabid...   145   3e-32

>ref|XP_002273366.1| PREDICTED: uncharacterized protein LOC100265908 [Vitis vinifera]
           gi|297740634|emb|CBI30816.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  166 bits (419), Expect = 2e-38
 Identities = 94/174 (54%), Positives = 112/174 (64%)
 Frame = -2

Query: 914 RSSRNYPMMNKRGRGSCGVVCSYSSPFTIHTLQWASTISSVVLVFAKGTAAPKSFLVPIF 735
           R   N+ ++ K+ R   G VC YS+P T   LQW  T+SS VL+ ++GTAA KSFLVP+F
Sbjct: 40  RFQGNHGVVMKKNRRGFGAVC-YSAPLTPPNLQWVCTVSSAVLMLSRGTAAQKSFLVPLF 98

Query: 734 ALQAPTSIISWIKGEYGLWTXXXXXXXXXXFSLPGELELPFMALLLVIVSPYQVMDLRGG 555
           ALQAPTSIISWIKGEYG WT          F +PGELELPF+ALLLVIV+PYQVM+LR  
Sbjct: 99  ALQAPTSIISWIKGEYGAWTAFLALLVRLFFFIPGELELPFVALLLVIVAPYQVMNLR-- 156

Query: 554 GTQXXXXXXXXXXXXXXYQHFSRLGSLRKAFDQGSXXXXXXXXXXXXVSCLLLI 393
           GTQ              +QHFSR GSL++AF+QGS            VSCLL I
Sbjct: 157 GTQMGAIVSLLIAGYLAFQHFSRAGSLQRAFNQGSIVATLAIICITAVSCLLFI 210


>ref|XP_002331870.1| predicted protein [Populus trichocarpa] gi|222875388|gb|EEF12519.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  152 bits (383), Expect = 2e-34
 Identities = 86/182 (47%), Positives = 109/182 (59%)
 Frame = -2

Query: 938 NNTQLSWQRSSRNYPMMNKRGRGSCGVVCSYSSPFTIHTLQWASTISSVVLVFAKGTAAP 759
           N  +LS + +     +  K      G VC ++   T  +L W S +SS VLV AKGTA  
Sbjct: 51  NPLRLSIKSNEMMMKIKRKESGRGFGAVC-HAGSLTTPSLPWISALSSAVLVLAKGTAVQ 109

Query: 758 KSFLVPIFALQAPTSIISWIKGEYGLWTXXXXXXXXXXFSLPGELELPFMALLLVIVSPY 579
           KSFLVP+FALQAP ++ISWIKGEYG+WT          F +PGELELPFMALLLVIV+PY
Sbjct: 110 KSFLVPLFALQAPPAVISWIKGEYGIWTAFLALLFRLFFFIPGELELPFMALLLVIVAPY 169

Query: 578 QVMDLRGGGTQXXXXXXXXXXXXXXYQHFSRLGSLRKAFDQGSXXXXXXXXXXXXVSCLL 399
           QVM++R  G Q              +QHFSR+G++++AF+QGS             SCLL
Sbjct: 170 QVMNIR--GKQEGAIVGLVIAAYLAFQHFSRIGNMQRAFEQGSVVATIAVVCVVVTSCLL 227

Query: 398 LI 393
           LI
Sbjct: 228 LI 229


>ref|XP_004147401.1| PREDICTED: cold-regulated 413 inner membrane protein 2,
           chloroplastic-like [Cucumis sativus]
           gi|449500602|ref|XP_004161143.1| PREDICTED:
           cold-regulated 413 inner membrane protein 2,
           chloroplastic-like [Cucumis sativus]
          Length = 224

 Score =  148 bits (374), Expect = 3e-33
 Identities = 79/147 (53%), Positives = 97/147 (65%)
 Frame = -2

Query: 890 MNKRGRGSCGVVCSYSSPFTIHTLQWASTISSVVLVFAKGTAAPKSFLVPIFALQAPTSI 711
           +NK+       VC Y+ P    TLQW STISSVVL+ AKGT   KSF+VP+FALQAP S+
Sbjct: 62  INKKKSRGLSAVC-YAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQAPASV 120

Query: 710 ISWIKGEYGLWTXXXXXXXXXXFSLPGELELPFMALLLVIVSPYQVMDLRGGGTQXXXXX 531
           ISWIKGEYG+W+          F +PGELE+PF++LLLVIV+PYQV +LR  GTQ     
Sbjct: 121 ISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLR--GTQEGCII 178

Query: 530 XXXXXXXXXYQHFSRLGSLRKAFDQGS 450
                    +QHFSR GS ++AFDQ S
Sbjct: 179 SLLIAAYLAFQHFSRAGSFQRAFDQNS 205


>ref|XP_002519745.1| COR414-TM1, putative [Ricinus communis] gi|223541162|gb|EEF42718.1|
           COR414-TM1, putative [Ricinus communis]
          Length = 223

 Score =  148 bits (374), Expect = 3e-33
 Identities = 82/181 (45%), Positives = 110/181 (60%)
 Frame = -2

Query: 938 NNTQLSWQRSSRNYPMMNKRGRGSCGVVCSYSSPFTIHTLQWASTISSVVLVFAKGTAAP 759
           NN +++ Q+  R +           G +C Y+ P +   LQW STISS +L+ AKGTA  
Sbjct: 56  NNDRMTLQKKVRRF-----------GALC-YAGPLSTSNLQWISTISSAILMVAKGTAIQ 103

Query: 758 KSFLVPIFALQAPTSIISWIKGEYGLWTXXXXXXXXXXFSLPGELELPFMALLLVIVSPY 579
           KSF+VP+ ALQAP+++ISW+KGEYG+WT          F +PGELELPF+ALLLV+V+PY
Sbjct: 104 KSFVVPLLALQAPSTVISWMKGEYGIWTAFLALLVRLFFFIPGELELPFLALLLVLVAPY 163

Query: 578 QVMDLRGGGTQXXXXXXXXXXXXXXYQHFSRLGSLRKAFDQGSXXXXXXXXXXXXVSCLL 399
           QV +LR  GTQ              +QHF+R G+L+KAF+QGS            +SCL 
Sbjct: 164 QVTNLR--GTQEGATIGLAIAGYLAFQHFTRAGNLQKAFEQGSIVATLAIICVTVISCLF 221

Query: 398 L 396
           L
Sbjct: 222 L 222


>ref|NP_973936.1| cold regulated 314 thylakoid membrane 2 [Arabidopsis thaliana]
           gi|332192958|gb|AEE31079.1| cold regulated 314 thylakoid
           membrane 2 [Arabidopsis thaliana]
          Length = 183

 Score =  145 bits (365), Expect = 3e-32
 Identities = 83/175 (47%), Positives = 102/175 (58%)
 Frame = -2

Query: 917 QRSSRNYPMMNKRGRGSCGVVCSYSSPFTIHTLQWASTISSVVLVFAKGTAAPKSFLVPI 738
           QR++       KR +    VVC  +   ++H LQW STIS V L+FA+GT   KSF+VP+
Sbjct: 11  QRTATVSARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPL 70

Query: 737 FALQAPTSIISWIKGEYGLWTXXXXXXXXXXFSLPGELELPFMALLLVIVSPYQVMDLRG 558
           FALQAP  I+SW+KGEYG+W           FS P ELELPF+ALLLVIV+PYQVM +R 
Sbjct: 71  FALQAPMGIVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIR- 129

Query: 557 GGTQXXXXXXXXXXXXXXYQHFSRLGSLRKAFDQGSXXXXXXXXXXXXVSCLLLI 393
            G Q              +QHFSR G+L+KAFDQ S            VS L LI
Sbjct: 130 -GKQEGAILSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 183