BLASTX nr result
ID: Coptis24_contig00002872
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002872 (400 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001238025.1| MFP1 attachment factor 1 [Glycine max] gi|75... 75 7e-12 ref|XP_002510141.1| conserved hypothetical protein [Ricinus comm... 73 3e-11 ref|XP_002285058.2| PREDICTED: MFP1 attachment factor 1-like [Vi... 72 5e-11 ref|XP_003523984.1| PREDICTED: MFP1 attachment factor 1-like [Gl... 72 6e-11 ref|XP_003544478.1| PREDICTED: MFP1 attachment factor 1-like [Gl... 71 1e-10 >ref|NP_001238025.1| MFP1 attachment factor 1 [Glycine max] gi|7546729|gb|AAF63659.1|AF118115_1 MFP1 attachment factor 1 [Glycine max] Length = 135 Score = 74.7 bits (182), Expect = 7e-12 Identities = 39/67 (58%), Positives = 48/67 (71%) Frame = +2 Query: 200 MSETEETPSPKQNQPKEAENIRQKFEKMNMTLSIWPPSQRTRDAVTNRLIETLSAPSILS 379 MS+TE TP + + P + E Q ++ SIWPP+QRTRDAV RLIETLSAPS+LS Sbjct: 1 MSDTETTPE-QPSTPPQTEAPPQPDPSAAVSFSIWPPTQRTRDAVVKRLIETLSAPSVLS 59 Query: 380 KRYGSLS 400 KRYG+LS Sbjct: 60 KRYGTLS 66 >ref|XP_002510141.1| conserved hypothetical protein [Ricinus communis] gi|223550842|gb|EEF52328.1| conserved hypothetical protein [Ricinus communis] Length = 173 Score = 72.8 bits (177), Expect = 3e-11 Identities = 36/64 (56%), Positives = 46/64 (71%) Frame = +2 Query: 209 TEETPSPKQNQPKEAENIRQKFEKMNMTLSIWPPSQRTRDAVTNRLIETLSAPSILSKRY 388 TE P P+Q Q + + K ++LSIWPP+QRTRDAV RLIETLS+PS+LSKRY Sbjct: 25 TESHPQPQQQQQEPPK----KLSTSGISLSIWPPTQRTRDAVITRLIETLSSPSVLSKRY 80 Query: 389 GSLS 400 G++S Sbjct: 81 GTIS 84 >ref|XP_002285058.2| PREDICTED: MFP1 attachment factor 1-like [Vitis vinifera] Length = 149 Score = 72.0 bits (175), Expect = 5e-11 Identities = 36/66 (54%), Positives = 50/66 (75%) Frame = +2 Query: 200 MSETEETPSPKQNQPKEAENIRQKFEKMNMTLSIWPPSQRTRDAVTNRLIETLSAPSILS 379 M+E++ P Q P+EA+ K +K+N+ SIWPP+QRTRDAV NRLIETL+ PS+L+ Sbjct: 1 MAESDNPPH-HQEPPQEAK----KPDKINVAFSIWPPTQRTRDAVINRLIETLTTPSVLA 55 Query: 380 KRYGSL 397 KRYG++ Sbjct: 56 KRYGTM 61 >ref|XP_003523984.1| PREDICTED: MFP1 attachment factor 1-like [Glycine max] Length = 161 Score = 71.6 bits (174), Expect = 6e-11 Identities = 35/65 (53%), Positives = 46/65 (70%) Frame = +2 Query: 206 ETEETPSPKQNQPKEAENIRQKFEKMNMTLSIWPPSQRTRDAVTNRLIETLSAPSILSKR 385 + +P P Q+QP A+ K ++ SIWPP+QRTRDAV RLIETLS+PS+LSKR Sbjct: 14 QDSSSPPPAQDQPVAAD---AKLGPAGVSFSIWPPTQRTRDAVITRLIETLSSPSVLSKR 70 Query: 386 YGSLS 400 YG++S Sbjct: 71 YGTMS 75 >ref|XP_003544478.1| PREDICTED: MFP1 attachment factor 1-like [Glycine max] Length = 123 Score = 70.9 bits (172), Expect = 1e-10 Identities = 40/71 (56%), Positives = 47/71 (66%), Gaps = 4/71 (5%) Frame = +2 Query: 200 MSETEET----PSPKQNQPKEAENIRQKFEKMNMTLSIWPPSQRTRDAVTNRLIETLSAP 367 MS+TE T +P Q P A ++ SIWPP+QRTRDAV NRLIETLSAP Sbjct: 1 MSDTETTLEQPSTPPQPDPSAA-----------VSFSIWPPTQRTRDAVVNRLIETLSAP 49 Query: 368 SILSKRYGSLS 400 S+LSKRYG+LS Sbjct: 50 SVLSKRYGTLS 60