BLASTX nr result

ID: Coptis24_contig00002872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002872
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238025.1| MFP1 attachment factor 1 [Glycine max] gi|75...    75   7e-12
ref|XP_002510141.1| conserved hypothetical protein [Ricinus comm...    73   3e-11
ref|XP_002285058.2| PREDICTED: MFP1 attachment factor 1-like [Vi...    72   5e-11
ref|XP_003523984.1| PREDICTED: MFP1 attachment factor 1-like [Gl...    72   6e-11
ref|XP_003544478.1| PREDICTED: MFP1 attachment factor 1-like [Gl...    71   1e-10

>ref|NP_001238025.1| MFP1 attachment factor 1 [Glycine max]
           gi|7546729|gb|AAF63659.1|AF118115_1 MFP1 attachment
           factor 1 [Glycine max]
          Length = 135

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/67 (58%), Positives = 48/67 (71%)
 Frame = +2

Query: 200 MSETEETPSPKQNQPKEAENIRQKFEKMNMTLSIWPPSQRTRDAVTNRLIETLSAPSILS 379
           MS+TE TP  + + P + E   Q      ++ SIWPP+QRTRDAV  RLIETLSAPS+LS
Sbjct: 1   MSDTETTPE-QPSTPPQTEAPPQPDPSAAVSFSIWPPTQRTRDAVVKRLIETLSAPSVLS 59

Query: 380 KRYGSLS 400
           KRYG+LS
Sbjct: 60  KRYGTLS 66


>ref|XP_002510141.1| conserved hypothetical protein [Ricinus communis]
           gi|223550842|gb|EEF52328.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/64 (56%), Positives = 46/64 (71%)
 Frame = +2

Query: 209 TEETPSPKQNQPKEAENIRQKFEKMNMTLSIWPPSQRTRDAVTNRLIETLSAPSILSKRY 388
           TE  P P+Q Q +  +    K     ++LSIWPP+QRTRDAV  RLIETLS+PS+LSKRY
Sbjct: 25  TESHPQPQQQQQEPPK----KLSTSGISLSIWPPTQRTRDAVITRLIETLSSPSVLSKRY 80

Query: 389 GSLS 400
           G++S
Sbjct: 81  GTIS 84


>ref|XP_002285058.2| PREDICTED: MFP1 attachment factor 1-like [Vitis vinifera]
          Length = 149

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/66 (54%), Positives = 50/66 (75%)
 Frame = +2

Query: 200 MSETEETPSPKQNQPKEAENIRQKFEKMNMTLSIWPPSQRTRDAVTNRLIETLSAPSILS 379
           M+E++  P   Q  P+EA+    K +K+N+  SIWPP+QRTRDAV NRLIETL+ PS+L+
Sbjct: 1   MAESDNPPH-HQEPPQEAK----KPDKINVAFSIWPPTQRTRDAVINRLIETLTTPSVLA 55

Query: 380 KRYGSL 397
           KRYG++
Sbjct: 56  KRYGTM 61


>ref|XP_003523984.1| PREDICTED: MFP1 attachment factor 1-like [Glycine max]
          Length = 161

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/65 (53%), Positives = 46/65 (70%)
 Frame = +2

Query: 206 ETEETPSPKQNQPKEAENIRQKFEKMNMTLSIWPPSQRTRDAVTNRLIETLSAPSILSKR 385
           +   +P P Q+QP  A+    K     ++ SIWPP+QRTRDAV  RLIETLS+PS+LSKR
Sbjct: 14  QDSSSPPPAQDQPVAAD---AKLGPAGVSFSIWPPTQRTRDAVITRLIETLSSPSVLSKR 70

Query: 386 YGSLS 400
           YG++S
Sbjct: 71  YGTMS 75


>ref|XP_003544478.1| PREDICTED: MFP1 attachment factor 1-like [Glycine max]
          Length = 123

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/71 (56%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
 Frame = +2

Query: 200 MSETEET----PSPKQNQPKEAENIRQKFEKMNMTLSIWPPSQRTRDAVTNRLIETLSAP 367
           MS+TE T     +P Q  P  A           ++ SIWPP+QRTRDAV NRLIETLSAP
Sbjct: 1   MSDTETTLEQPSTPPQPDPSAA-----------VSFSIWPPTQRTRDAVVNRLIETLSAP 49

Query: 368 SILSKRYGSLS 400
           S+LSKRYG+LS
Sbjct: 50  SVLSKRYGTLS 60


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