BLASTX nr result

ID: Coptis24_contig00002859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002859
         (1232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284980.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   526   e-147
ref|XP_004136993.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   513   e-143
ref|XP_004165805.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-pro...   511   e-142
ref|XP_002306460.1| predicted protein [Populus trichocarpa] gi|2...   511   e-142
ref|XP_003529384.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   509   e-142

>ref|XP_002284980.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 [Vitis
           vinifera] gi|297741330|emb|CBI32461.3| unnamed protein
           product [Vitis vinifera]
          Length = 361

 Score =  526 bits (1356), Expect = e-147
 Identities = 251/317 (79%), Positives = 280/317 (88%)
 Frame = +3

Query: 3   GIGPNTGVPLHYKGVCFHRIIKGFMLQGGDISAGNGTGGESIYGSKFEDENFELKHERKG 182
           GIGPNTGVPLHYKGVCFHR+I+GFM+QGGDISAGNGTGGESIYG KFEDENFELKHERKG
Sbjct: 45  GIGPNTGVPLHYKGVCFHRVIRGFMIQGGDISAGNGTGGESIYGLKFEDENFELKHERKG 104

Query: 183 MLSMANSGPNTNGSQFFITTTRTAHLDXXXXXXXXXXXXXXXXRAMEHVTTLDENCPSLD 362
           MLSMANSG NTNGSQFFITTTRT+HLD                R++EHVTT D +CP+++
Sbjct: 105 MLSMANSGANTNGSQFFITTTRTSHLDGKHVVFGKVVKGMGVVRSIEHVTTGDNDCPTVN 164

Query: 363 VVIADCGEIRQGADDGISNFFDDGDTYPDWPADLDEKQTDISWWLSAVDSAKSFGNEHYK 542
           V+IADCGEI +G D+G+SNFF DGDTYPDWPADLDE   D+SWW +AVDS K+FGNEH+K
Sbjct: 165 VLIADCGEIPEGVDNGVSNFFKDGDTYPDWPADLDENPNDLSWWTNAVDSVKAFGNEHFK 224

Query: 543 KQDYKMALRKYRKALRYLDICWEKEDIDEEKTTYLRKTKSQIFTNSSACKLKMGDLKGAL 722
           KQDYKMALRKYRKALRYLDICWEKE IDEEK++ LRKTKS IFTNSSACKLK+GDLKGAL
Sbjct: 225 KQDYKMALRKYRKALRYLDICWEKEGIDEEKSSCLRKTKSLIFTNSSACKLKLGDLKGAL 284

Query: 723 LDTEFAMREGEDNVKAFFRQGQAYMALNDIDAAVESFKKALELEPNDGGIKKELAAAKKR 902
           LDT+FAMR+ E+NVKA +RQGQAYMALNDIDAA ESFKKALELEPNDGGIK+ELAAAKK+
Sbjct: 285 LDTDFAMRDEENNVKALYRQGQAYMALNDIDAAAESFKKALELEPNDGGIKRELAAAKKK 344

Query: 903 IADRHGREKAAYSRMFQ 953
           IADR  +E+ AYSRMFQ
Sbjct: 345 IADRREQERKAYSRMFQ 361


>ref|XP_004136993.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40-like [Cucumis
           sativus]
          Length = 361

 Score =  513 bits (1322), Expect = e-143
 Identities = 241/317 (76%), Positives = 276/317 (87%)
 Frame = +3

Query: 3   GIGPNTGVPLHYKGVCFHRIIKGFMLQGGDISAGNGTGGESIYGSKFEDENFELKHERKG 182
           GIGP+TGVPLH+KG CFHR+IKGFM+QGGDISAG+GTGGESIYG KF+DENFE+KHERKG
Sbjct: 45  GIGPHTGVPLHFKGSCFHRVIKGFMVQGGDISAGDGTGGESIYGEKFDDENFEVKHERKG 104

Query: 183 MLSMANSGPNTNGSQFFITTTRTAHLDXXXXXXXXXXXXXXXXRAMEHVTTLDENCPSLD 362
           MLSMANSGPN+NGSQFFITTTRT HLD                R++EHVTT +  CP  +
Sbjct: 105 MLSMANSGPNSNGSQFFITTTRTPHLDGKHVVFGKVLKGMGVVRSIEHVTTGENACPIAE 164

Query: 363 VVIADCGEIRQGADDGISNFFDDGDTYPDWPADLDEKQTDISWWLSAVDSAKSFGNEHYK 542
           V+I+DCGEI +GADDGISNFF+DGDT+PDWP DL++   D+ WW+ AVDS K FGNEHYK
Sbjct: 165 VIISDCGEIPEGADDGISNFFNDGDTFPDWPTDLEQSSDDLEWWVKAVDSVKVFGNEHYK 224

Query: 543 KQDYKMALRKYRKALRYLDICWEKEDIDEEKTTYLRKTKSQIFTNSSACKLKMGDLKGAL 722
           KQDYKMALRKYRKALRYLDICWEKE IDEEK++YLRKTKSQIFTNSSACKLK+GDLKGAL
Sbjct: 225 KQDYKMALRKYRKALRYLDICWEKEGIDEEKSSYLRKTKSQIFTNSSACKLKLGDLKGAL 284

Query: 723 LDTEFAMREGEDNVKAFFRQGQAYMALNDIDAAVESFKKALELEPNDGGIKKELAAAKKR 902
           LDT+FAMR+G+DNVKA FRQGQA+MALNDID+AVESFKKA +LEPND  IKKELAAA+K+
Sbjct: 285 LDTDFAMRDGDDNVKALFRQGQAHMALNDIDSAVESFKKASDLEPNDAAIKKELAAARKK 344

Query: 903 IADRHGREKAAYSRMFQ 953
           IADR  +E+ AYS+MFQ
Sbjct: 345 IADRRNQERKAYSKMFQ 361


>ref|XP_004165805.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
           CYP40-like [Cucumis sativus]
          Length = 361

 Score =  511 bits (1316), Expect = e-142
 Identities = 240/317 (75%), Positives = 275/317 (86%)
 Frame = +3

Query: 3   GIGPNTGVPLHYKGVCFHRIIKGFMLQGGDISAGNGTGGESIYGSKFEDENFELKHERKG 182
           GIGP+TGVPLH+KG CFHR+IKGFM+QGGDISAG+GTGGESIYG KF+DENFE+KHER G
Sbjct: 45  GIGPHTGVPLHFKGSCFHRVIKGFMVQGGDISAGDGTGGESIYGEKFDDENFEVKHERXG 104

Query: 183 MLSMANSGPNTNGSQFFITTTRTAHLDXXXXXXXXXXXXXXXXRAMEHVTTLDENCPSLD 362
           MLSMANSGPN+NGSQFFITTTRT HLD                R++EHVTT +  CP  +
Sbjct: 105 MLSMANSGPNSNGSQFFITTTRTPHLDGKHVVFGKVLKGMGVVRSIEHVTTGENACPIAE 164

Query: 363 VVIADCGEIRQGADDGISNFFDDGDTYPDWPADLDEKQTDISWWLSAVDSAKSFGNEHYK 542
           V+I+DCGEI +GADDGISNFF+DGDT+PDWP DL++   D+ WW+ AVDS K FGNEHYK
Sbjct: 165 VIISDCGEIPEGADDGISNFFNDGDTFPDWPTDLEQSSDDLEWWVKAVDSVKVFGNEHYK 224

Query: 543 KQDYKMALRKYRKALRYLDICWEKEDIDEEKTTYLRKTKSQIFTNSSACKLKMGDLKGAL 722
           KQDYKMALRKYRKALRYLDICWEKE IDEEK++YLRKTKSQIFTNSSACKLK+GDLKGAL
Sbjct: 225 KQDYKMALRKYRKALRYLDICWEKEGIDEEKSSYLRKTKSQIFTNSSACKLKLGDLKGAL 284

Query: 723 LDTEFAMREGEDNVKAFFRQGQAYMALNDIDAAVESFKKALELEPNDGGIKKELAAAKKR 902
           LDT+FAMR+G+DNVKA FRQGQA+MALNDID+AVESFKKA +LEPND  IKKELAAA+K+
Sbjct: 285 LDTDFAMRDGDDNVKALFRQGQAHMALNDIDSAVESFKKASDLEPNDAAIKKELAAARKK 344

Query: 903 IADRHGREKAAYSRMFQ 953
           IADR  +E+ AYS+MFQ
Sbjct: 345 IADRRNQERKAYSKMFQ 361


>ref|XP_002306460.1| predicted protein [Populus trichocarpa] gi|222855909|gb|EEE93456.1|
           predicted protein [Populus trichocarpa]
          Length = 361

 Score =  511 bits (1315), Expect = e-142
 Identities = 245/317 (77%), Positives = 274/317 (86%)
 Frame = +3

Query: 3   GIGPNTGVPLHYKGVCFHRIIKGFMLQGGDISAGNGTGGESIYGSKFEDENFELKHERKG 182
           GIGPNTGVPLHYKG  FHR+++GFM+QGGDISAG+GTGGESIYG KFEDENFELKHERKG
Sbjct: 45  GIGPNTGVPLHYKGGRFHRVVRGFMIQGGDISAGDGTGGESIYGLKFEDENFELKHERKG 104

Query: 183 MLSMANSGPNTNGSQFFITTTRTAHLDXXXXXXXXXXXXXXXXRAMEHVTTLDENCPSLD 362
           MLSMAN GP+TNGSQFFITTTRT+HLD                R++EHV T   + PS +
Sbjct: 105 MLSMANMGPDTNGSQFFITTTRTSHLDGKHVVFGKVTKGMGVVRSIEHVVTEGGDSPSQE 164

Query: 363 VVIADCGEIRQGADDGISNFFDDGDTYPDWPADLDEKQTDISWWLSAVDSAKSFGNEHYK 542
            VI DCGEI +G DDGIS+FF DGDTYPDWPADLD K  +ISWW+ AVDS K+FGNE YK
Sbjct: 165 TVIVDCGEIPEGEDDGISDFFKDGDTYPDWPADLDMKPDEISWWMKAVDSIKAFGNEQYK 224

Query: 543 KQDYKMALRKYRKALRYLDICWEKEDIDEEKTTYLRKTKSQIFTNSSACKLKMGDLKGAL 722
           KQD KMALRKYRKALRYLD+CWEKEDIDEEK++ LRKTKSQIFTNSSACKLK+GD+KGAL
Sbjct: 225 KQDCKMALRKYRKALRYLDVCWEKEDIDEEKSSSLRKTKSQIFTNSSACKLKLGDIKGAL 284

Query: 723 LDTEFAMREGEDNVKAFFRQGQAYMALNDIDAAVESFKKALELEPNDGGIKKELAAAKKR 902
           LDT+FAMR+GEDN KAFFRQGQAYMALNDIDAAV SFKKAL+LEPNDGGIKKELA+A+K+
Sbjct: 285 LDTDFAMRDGEDNAKAFFRQGQAYMALNDIDAAVASFKKALDLEPNDGGIKKELASARKK 344

Query: 903 IADRHGREKAAYSRMFQ 953
           IADRH +EK AY+RMFQ
Sbjct: 345 IADRHDQEKRAYARMFQ 361


>ref|XP_003529384.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40-like [Glycine
           max]
          Length = 361

 Score =  509 bits (1310), Expect = e-142
 Identities = 244/317 (76%), Positives = 273/317 (86%)
 Frame = +3

Query: 3   GIGPNTGVPLHYKGVCFHRIIKGFMLQGGDISAGNGTGGESIYGSKFEDENFELKHERKG 182
           GIGPNTGVPLH+KG CFHR+IKGFM+QGGDISAG+GTGGESIYG KFEDENFELKHERKG
Sbjct: 45  GIGPNTGVPLHFKGSCFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDENFELKHERKG 104

Query: 183 MLSMANSGPNTNGSQFFITTTRTAHLDXXXXXXXXXXXXXXXXRAMEHVTTLDENCPSLD 362
           MLSMANSGPNTNGSQFFI+TTRT+HLD                R++EHV T D++ P+LD
Sbjct: 105 MLSMANSGPNTNGSQFFISTTRTSHLDGKHVVFGKVVKGMGVVRSVEHVATGDDDRPALD 164

Query: 363 VVIADCGEIRQGADDGISNFFDDGDTYPDWPADLDEKQTDISWWLSAVDSAKSFGNEHYK 542
           V + DCGEI +G DDGISNFF DGDTYPDWPADLDE   ++ WW+ +VDS K+FGNE+Y+
Sbjct: 165 VKVVDCGEIPEGEDDGISNFFKDGDTYPDWPADLDESPNELEWWMKSVDSIKAFGNEYYR 224

Query: 543 KQDYKMALRKYRKALRYLDICWEKEDIDEEKTTYLRKTKSQIFTNSSACKLKMGDLKGAL 722
           KQDYKMALRKYRKALRYLDICWEKE IDEE ++ LRKTKSQIFTNSSA KLK+GD+KGAL
Sbjct: 225 KQDYKMALRKYRKALRYLDICWEKEGIDEEISSSLRKTKSQIFTNSSASKLKLGDIKGAL 284

Query: 723 LDTEFAMREGEDNVKAFFRQGQAYMALNDIDAAVESFKKALELEPNDGGIKKELAAAKKR 902
           LDTEFAMREG+DN KA FRQGQAYMAL+DIDAAVESFKKAL LEPND GIKKELAAA+K 
Sbjct: 285 LDTEFAMREGDDNAKALFRQGQAYMALHDIDAAVESFKKALTLEPNDAGIKKELAAARKM 344

Query: 903 IADRHGREKAAYSRMFQ 953
           IADR  +EK AYS+MFQ
Sbjct: 345 IADRRDQEKKAYSKMFQ 361


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